Gene
KWMTBOMO10706
Annotation
endonuclease-reverse_transcriptase_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.438
Sequence
CDS
ATGGAAGAAATAAAAGACATGTTCTTGAGTTTGCAACAAGACATAAAACAACAAAAAGAAGATATGGTAAAGATGAAGGAAGACATCAAAAACATAATAGTTAACAGCCTTGCCGAGAAGTTAAGCAGCTTAGAACTTAAAAACGAGCTTTTAGAACAAAAAATTGAAGAACAAAATAGAAAGATGAACAACTTAGAAAGACAGTCTAGACGCAAAAACTTGGTCATGTTTGGTGTAGAAGAGCGCGAAAACTCATACCACGAACTTGAAGAAATGATAATCAGCATAATAAATACAAATTTTAAAGTATCCTGCGAAACTAACAGCATTGAAGCAGTACGTAGGTTGGGAAAAAAGGGAGAGAAGACCAGACCAGTAGTAATAACGTTCAACACATTAGGATTAAAACTAAAAATTCAGAAAGACAAATATTGTTTACAAAAAACCGCATACTACATAAAAGAAGACTATCCAATTGAAATCTTAAAAAAGCGCAAAGAGTTGCAAGCCCAGTTAGAGAGGGAAAAAGAAGCAGGAAATAGAGCAATTATAAGATATGACAAACTTATCATACTGAATAAAAAACATTCTCCCCGCAATCAACCAAACAAGAGATACCTTTCCGAATCCCCGGAGACACCTATGACTGCTAGCCAAGAAACTCAACACGTTGAAAAACAACCTTTGAAGAAAACCAAAGCGAGGAACATGAAAAGCTACATAACACAGACGCCCAAACTAGCAGCGTTACAAGGCATCAACCACGATGTAATAGGACTGTGCGAAGTCCGCCGCTTTGGTGAAAAGATAATCGAAGATGACAAATACATTATGTACCACATAGGCCAAACCAAAGGACTGCACGGGGTAGGCTTCCTAATCAAGAAGATACACAAAGAAAATATCATATCATTCACAGGTATATCTGAGAGAGTGTGCATACTAGAAATCGTGCTAGAAAAGATACGTCTCGCAATTATCCAGGCATATGCCCCAACTGAAAACTCGTCGCAAGAAGATATAGATAACTTTTACGACGACCTGGAGAAAGCGCATGACTCAACCTGTACGAAATATATAATTTCTATGGGAGATTTTAACGCACAAATAGGGACTACCAAGAAGTATGAATGTTCCGCTACCGGCAAGTATGGACATGGTATCAGGAAGATTATAAATATAGCTACCAACTTTTACACTAAATTATACAGTCAACCAGACATTAATCCACTGAGGAAAAAAGATATCTTTAGTCATACTAATACCTCATCTGTACAACGCTTTTCCGAGTCTGAAGTCTTAAGACAAGTAAAGAAACTTAAGTCAGAAAAGAGCCCAGGACCAGATGGCATTACCAACGAATACATCAAGTTAGCTAGAACCTTACTATTGACACCAATCACCATCTTATGGAACAAAATACTTGAAGAAGAAACTGTGCCGCAGCTATGGAGGGAGTCTGAGATTATATTACTATATAAAAAAGGTAATCCAGCTGACATAGGGAATTACCGCCCGATTAGCCTTATGCCCTGTTTATATAAATTATGTGCCTCCTGCCTACTTGAAAGAATATCCTCCAGCATTGATTCACACCAGCCGATAGAGCAAGCTGGCTTCAGAACGGGTTTTAGCACGGCAGACCATATTCAAGTTGTCGACCAGGTTATCGAAAAATACTTAGAGTTCCAAAGGCCCCTATACCTGGCTTTTGTAGATTATAAAAAAGCTTTCGACTCTATATCACACGACAGTATCTGGGAAGCTTTACATGCATTAAATATTCAAGAAAAATACATTAGCATTCTAAAAAACATTTATACCAACTGCACAAGTAAAGTTAAGCTAGATAGAATCGGAGCAACAATCAACATAAAGAGGGGAGTCCGTCAAGGCGATCCTCTATCCCCAAAACTGTTTATAGCCGTCTTACAACAGATAACGAGCAATTTACCATGGTCTAAAAAAGGGATTAACATAAATGGAAGCTATCTGAGCCATCTCGAATTTGCAGATGACGTTATACTATTTTCTGAATGCCCACAACAATTGAGTATAATGATAAATGAATTACATCAAGCTAGCTCAAAAATTGGCTTAGAAATGAACCTCGAGAAAACGAAAGTAATGACTAATCACCATACGTTACCAATCTCTATCAACAACATTCCTCTTGAAATTGTAGAAAAATATGTATATTTAGGAAAGCAAATATCTTTTAGAAGGGAGAGACACTCAGAAGAAGTGGACCGACGAGTCGCCATGACCTGGAAAAAGTATTGGGCTTATAAGGAAATTTTCAAATCGCAACTGCCATTGTCCACTAAGAAGATAGCCATGGACACAACTATACTACCATGCCTGACCTATGGGTGTCAATCATGGACATTTGATTTCAAAACGAAAAATAAAATCCAGACCACTCAGAGAAAAATGGAAAGAAGTATTATGGGCTTAAAACTTAAAGACAAGGTGAAATGCACGAATGTCCGTCAGAAAACGAAAATAACAGATGCTTTAACATTCTCGCTACAGAGGAAATGGAAATGGGCAGGCCATCTGGCTAGATACAACGACAACAGATGGACAAAAAGATCGGTCGTATGGACAGGTCCACGAGGAAAGAGAGCTAAAGGCCGCCCCTACGCTAGGTGGGTAGACGAAATTATAACAGTGGCTGGTAAAGATTGGCTGAATATCGCCAAGGATAAGAAGAAGTGGAGTACCTTAGAGGAGGCTTTTACCCGAAGGGGGTCCATACAGAAATAA
Protein
MEEIKDMFLSLQQDIKQQKEDMVKMKEDIKNIIVNSLAEKLSSLELKNELLEQKIEEQNRKMNNLERQSRRKNLVMFGVEERENSYHELEEMIISIINTNFKVSCETNSIEAVRRLGKKGEKTRPVVITFNTLGLKLKIQKDKYCLQKTAYYIKEDYPIEILKKRKELQAQLEREKEAGNRAIIRYDKLIILNKKHSPRNQPNKRYLSESPETPMTASQETQHVEKQPLKKTKARNMKSYITQTPKLAALQGINHDVIGLCEVRRFGEKIIEDDKYIMYHIGQTKGLHGVGFLIKKIHKENIISFTGISERVCILEIVLEKIRLAIIQAYAPTENSSQEDIDNFYDDLEKAHDSTCTKYIISMGDFNAQIGTTKKYECSATGKYGHGIRKIINIATNFYTKLYSQPDINPLRKKDIFSHTNTSSVQRFSESEVLRQVKKLKSEKSPGPDGITNEYIKLARTLLLTPITILWNKILEEETVPQLWRESEIILLYKKGNPADIGNYRPISLMPCLYKLCASCLLERISSSIDSHQPIEQAGFRTGFSTADHIQVVDQVIEKYLEFQRPLYLAFVDYKKAFDSISHDSIWEALHALNIQEKYISILKNIYTNCTSKVKLDRIGATINIKRGVRQGDPLSPKLFIAVLQQITSNLPWSKKGININGSYLSHLEFADDVILFSECPQQLSIMINELHQASSKIGLEMNLEKTKVMTNHHTLPISINNIPLEIVEKYVYLGKQISFRRERHSEEVDRRVAMTWKKYWAYKEIFKSQLPLSTKKIAMDTTILPCLTYGCQSWTFDFKTKNKIQTTQRKMERSIMGLKLKDKVKCTNVRQKTKITDALTFSLQRKWKWAGHLARYNDNRWTKRSVVWTGPRGKRAKGRPYARWVDEIITVAGKDWLNIAKDKKKWSTLEEAFTRRGSIQK
Summary
Uniprot
Proteomes
Pfam
PF00078 RVT_1
SUPFAM
SSF56219
SSF56219
Gene 3D
ProteinModelPortal
PDB
6AR3
E-value=0.00656139,
Score=97
Ontologies
GO
Topology
Length:
922
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01505
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1 - 922
Population Genetic Test Statistics
Pi
38.637667
Theta
25.773078
Tajima's D
-0.795435
CLR
161.076529
CSRT
0.184790760461977
Interpretation
Uncertain
