SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10697
Annotation
cuticular_protein_glycine-rich_6_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.723 Nuclear   Reliability : 1.094
 

Sequence

CDS
ATGTATCCACCGCATCTGGTACTGGTGGTGGTAGCAGTCCTTGTCATCAGCGCGGTGTACGCTGATGAGGAGAAGAAAACTGAGAAACGTGGTCTCTCTGGCCTCGGATACGGCGGTTTGGGATACGGCAGTCATGGCGTTGGCTACGACGGTCTCGGATACAGTGGTCTCGGCGGATACAGTGGAGTCGGCTACAGCGGTGGATACTACCCAGTTAGTAAGGTCGCTTACACGACGGCTCACAACGGCCTCGGATACGGCGGTTACGGCGGATACGGCGGATACTCCGGCCTTGGCGGATACGGACTCGGTAATACTTTCGATTAA
Protein
MYPPHLVLVVVAVLVISAVYADEEKKTEKRGLSGLGYGGLGYGSHGVGYDGLGYSGLGGYSGVGYSGGYYPVSKVAYTTAHNGLGYGGYGGYGGYSGLGGYGLGNTFD

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.998649
 
 
Length:
108
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
45.34747
Exp number, first 60 AAs:
24.21862
Total prob of N-in:
0.23470
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  21
inside
22  -  108
 
 

Population Genetic Test Statistics

Pi
282.225973
Theta
202.018643
Tajima's D
0.253469
CLR
0.855469
CSRT
0.44372781360932
Interpretation
Uncertain
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