Gene

KWMTBOMO10696  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008268

Annotation

PREDICTED:_xanthine_dehydrogenase_2-like_[Bombyx_mori]

Location

Bomo_Chr18(-):668532-671979      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.282

CDS

ATGGGAGAATTCCTGCAGACAAACATGCGAGGAACGGTTATATTAAACGTTATGTTGCCTCCTTTGAATAAGACCTATTTGGTTACAACTATGAAGATAATGCCTAAATCTCAAAATGCGCACGCTATAGTCAATGCTGGTTTTCTATACAAATTAGCCAATAATTCGATAGTCACTCAAGCCAGGATCGTCTACAACGGCATCTCACCGACATTCGTAAGGGCTTTAGGAACCGAGAATTTCCTAATCGGAAAACCGTTGTTCAAAAACGAAACTCTTCAGTCGGCTTTGAACATTTTGAAGAAGGATCTAAACGCCACTGAAATGCCTCCCGAACCAAGCGCAGCGTATAGACAGCAGCTGGGTTTGGCAATGTTTTATAAGGGTCTCTTATATTTTTATCCATCAAACAACATAAATCCGAGGTATCTCTCTGGAGCTACATTTCTCCGTAAGGCAAGACCTTTATCACGTGGAGAGCAAAATTATGAAACAAATTCTGCACTTTGGCCTTTAAGTCAGCCAATCCCAAAGTTAGAATCATTGGTGAGTTTTAAAGATATTTAA

Protein

MGEFLQTNMRGTVILNVMLPPLNKTYLVTTMKIMPKSQNAHAIVNAGFLYKLANNSIVTQARIVYNGISPTFVRALGTENFLIGKPLFKNETLQSALNILKKDLNATEMPPEPSAAYRQQLGLAMFYKGLLYFYPSNNINPRYLSGATFLRKARPLSRGEQNYETNSALWPLSQPIPKLESLVSFKDI

Cofactor

FAD
Mo-molybdopterin
[2Fe-2S] cluster

Uniprot

H9JFH1   A0A2A4JUF7   A0A2A4IRV9   A0A2W1BJJ3   H9JFE7   A0A2W1BIE3   + More
A0A2H1VA65   A0A2A4ITB4   A0A2H1VZA4   A0A194PIT3   A0A2H1V2I4   A0A0N0PD45   A0A2W1BG03   A0A194PE80   A0A0N0PDI7   A0A3S2NDD1   A0A2A4JU78   A0A194PCQ5   A0A2H1V6B6   A0A3S2KXA4   A0A212FI14   A0A2A4ISI6   A0A0L7L4E9   A0A194PDB3   A0A0N1IAK3   A0A3S2PBH0   A0A0F7QHK5   A0A2A4JB30   H9JFX4   A0A0L7L3S0   A0A2A4JYR8   A0A0F7QJV6   A0A2A4JXM9   A0A1X9ZM11   A0A2H1VH28   A0A076FX80   A0A1L8D6Q4   A0A0N0PF58   A0A194QM53   A0A194QUG5   A0A0F7QEA1   A0A2H1VCW8   A0A2H1VNQ0   A0A076FRA1   H9JFX1   A0A2H1V7P8   A0A2H1VSX5   A0A212EZ25   A8TUB4   A0A194QBY5   A0A2A4JY06   A0A1X9ZM28   A0A2H1VEC0   A0A1X9ZM23   H9JFZ2   A8TUC0   A0A1U9X1S0   A0A212F791   A0A212FKB8   A0A194QCB6   A0A2A4JX39   A0A0N1I7K2   A0A0H4TY60   A0A194QMP0   A0A194PCA1   A0A1X9ZLZ6   A0A0F7QIE0   A0A3S2NMY0   A0A2H1W0Z2   A0A0L7L4A2   A0A0H4TD12   A0A2W1BIK1   A0A2A4ITG3   A0A0F7QEA3   D7EK61   A0A3S2P6B3   A0A194PIN2   A0A2A4KA50   A0A2H1VIZ6   A0A2H1WDE7   A0A0K8S7B1   A0A212F2C6   A0A0L7LLP8   S5FPI8   A0A0K8S633   A0A2W1BGZ9   T1HPX4   A0A076FRM9   A0A194PDZ5   D6W6X3   A0A067QY40   D7EK62   A0A2J7PXT6   A0A3Q0JHS8   A0A067R2R7   A0A0K1YW91   A0A182Q3A3   A0A1B6J3L1   A0A084WK44  

Pubmed

19121390    28756777    26354079    22118469    26227816    25803580    + More
24817326    17904312    26778204    18362917    19820115    23826341    24845553    24438588   

EMBL

BABH01034958    BABH01034959    BABH01034960    BABH01034961    BABH01034962    BABH01034963    + More
BABH01034964    BABH01034965    NWSH01000648    PCG75032.1    NWSH01007964    PCG62737.1    KZ150135    PZC72996.1    BABH01034979    BABH01034980    BABH01034981    PZC72997.1    ODYU01001481    SOQ37735.1    PCG62736.1    ODYU01005369    SOQ46133.1    KQ459606    KPI91000.1    ODYU01000376    SOQ35055.1    KQ460326    KPJ15694.1    KZ150165    PZC72655.1    KPI90999.1    KPJ15692.1    RSAL01000088    RVE48202.1    PCG75033.1    KPI90997.1    ODYU01000882    SOQ36316.1    RSAL01001905    RVE40636.1    AGBW02008446    OWR53382.1    PCG62735.1    JTDY01003022    KOB70290.1    KPI90998.1    KPJ15693.1    RSAL01000123    RVE46648.1    LC017755    BAR64769.1    NWSH01002143    PCG69059.1    BABH01001568    BABH01001569    BABH01001570    BABH01001571    BABH01001572    BABH01001573    JTDY01003126    KOB70107.1    NWSH01000413    PCG76560.1    LC017753    BAR64767.1    PCG76559.1    KY595781    ARS46835.1    ODYU01002537    SOQ40155.1    KF960794    AII21996.1    GEYN01000001    JAV02128.1    KQ459674    KPJ20482.1    KQ461196    KPJ06623.1    KQ461154    KPJ08620.1    LC017752    BAR64766.1    ODYU01001878    SOQ38698.1    ODYU01003306    SOQ41884.1    KF960795    AII21997.1    BABH01001558    ODYU01001109    SOQ36868.1    ODYU01004253    SOQ43930.1    AGBW02011403    OWR46707.1    EU073423    ABW71271.1    KQ459193    KPJ03063.1    PCG76558.1    KY595780    ARS46834.1    ODYU01002094    SOQ39169.1    KY595779    ARS46833.1    BABH01001657    BABH01001658    BABH01001659    BABH01001660    EU073424    ABW71272.1    KY643683    AQY62686.1    AGBW02009901    OWR49607.1    AGBW02008082    OWR54176.1    KPJ03064.1    PCG76561.1    KQ460556    KPJ13979.1    KP899547    AKQ06146.1    KPJ06614.1    KPI90901.1    KY595778    ARS46832.1    LC017754    BAR64768.1    RSAL01000229    RVE43893.1    ODYU01005636    SOQ46683.1    JTDY01003017    KOB70302.1    KP899546    AKQ06145.1    PZC72656.1    NWSH01007172    PCG63055.1    LC017757    BAR64771.1    KQ971466    EFA13012.2    RSAL01000295    RVE42846.1    KPI90950.1    NWSH01000022    PCG80663.1    ODYU01002835    SOQ40809.1    ODYU01007852    SOQ50986.1    GBRD01017212    JAG48615.1    AGBW02010767    OWR47879.1    JTDY01000607    KOB76483.1    KC952900    AGQ43599.1    GBRD01017213    JAG48614.1    PZC72995.1    ACPB03021369    ACPB03021370    KF960796    AII21998.1    KPI90909.1    KQ971307    EFA11446.2    KK852888    KDR14320.1    DS497731    EFA13013.1    NEVH01020852    PNF21140.1    KK852750    KDR17215.1    KP859406    AKZ17716.1    AXCN02000554    GECU01013927    JAS93779.1    ATLV01024093    KE525349    KFB50588.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000283053    UP000007151    + More
UP000037510    UP000007266    UP000015103    UP000027135    UP000235965    UP000079169    UP000075886    UP000030765   

PRIDE

H9JFH1    H9JFE7    H9JFX4    H9JFX1    A8TUB4    H9JFZ2    + More
A8TUC0   

Pfam

PF02738   Ald_Xan_dh_C2        + More
PF01315   Ald_Xan_dh_C
PF03450   CO_deh_flav_C
PF00111   Fer2
PF00941   FAD_binding_5
PF01799   Fer2_2
PF00271   Helicase_C
PF01130   CD36

Interpro

IPR000674   Ald_Oxase/Xan_DH_a/b        + More
IPR002888   2Fe-2S-bd       
IPR036884   2Fe-2S-bd_dom_sf       
IPR005107   CO_DH_flav_C       
IPR008274   AldOxase/xan_DH_Mopterin-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR001041   2Fe-2S_ferredoxin-type       
IPR036010   2Fe-2S_ferredoxin-like_sf       
IPR036683   CO_DH_flav_C_dom_sf       
IPR036856   Ald_Oxase/Xan_DH_a/b_sf       
IPR006058   2Fe2S_fd_BS       
IPR016166   FAD-bd_PCMH       
IPR002346   Mopterin_DH_FAD-bd       
IPR037165   AldOxase/xan_DH_Mopterin-bd_sf       
IPR016208   Ald_Oxase/xanthine_DH       
IPR016169   FAD-bd_PCMH_sub2       
IPR012675   Beta-grasp_dom_sf       
IPR027417   P-loop_NTPase       
IPR002464   DNA/RNA_helicase_DEAH_CS       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       
IPR002159   CD36_fam       

SUPFAM

SSF54665   SSF54665        + More
SSF54292   SSF54292       
SSF55447   SSF55447       
SSF56176   SSF56176       
SSF56003   SSF56003       
SSF47741   SSF47741       
SSF52540   SSF52540       

Gene 3D

3.10.20.30     3.30.465.10    

CDD

cd00207  fer2
cd00079  HELICc

ProteinModelPortal

H9JFH1   A0A2A4JUF7   A0A2A4IRV9   A0A2W1BJJ3   H9JFE7   A0A2W1BIE3   + More
A0A2H1VA65   A0A2A4ITB4   A0A2H1VZA4   A0A194PIT3   A0A2H1V2I4   A0A0N0PD45   A0A2W1BG03   A0A194PE80   A0A0N0PDI7   A0A3S2NDD1   A0A2A4JU78   A0A194PCQ5   A0A2H1V6B6   A0A3S2KXA4   A0A212FI14   A0A2A4ISI6   A0A0L7L4E9   A0A194PDB3   A0A0N1IAK3   A0A3S2PBH0   A0A0F7QHK5   A0A2A4JB30   H9JFX4   A0A0L7L3S0   A0A2A4JYR8   A0A0F7QJV6   A0A2A4JXM9   A0A1X9ZM11   A0A2H1VH28   A0A076FX80   A0A1L8D6Q4   A0A0N0PF58   A0A194QM53   A0A194QUG5   A0A0F7QEA1   A0A2H1VCW8   A0A2H1VNQ0   A0A076FRA1   H9JFX1   A0A2H1V7P8   A0A2H1VSX5   A0A212EZ25   A8TUB4   A0A194QBY5   A0A2A4JY06   A0A1X9ZM28   A0A2H1VEC0   A0A1X9ZM23   H9JFZ2   A8TUC0   A0A1U9X1S0   A0A212F791   A0A212FKB8   A0A194QCB6   A0A2A4JX39   A0A0N1I7K2   A0A0H4TY60   A0A194QMP0   A0A194PCA1   A0A1X9ZLZ6   A0A0F7QIE0   A0A3S2NMY0   A0A2H1W0Z2   A0A0L7L4A2   A0A0H4TD12   A0A2W1BIK1   A0A2A4ITG3   A0A0F7QEA3   D7EK61   A0A3S2P6B3   A0A194PIN2   A0A2A4KA50   A0A2H1VIZ6   A0A2H1WDE7   A0A0K8S7B1   A0A212F2C6   A0A0L7LLP8   S5FPI8   A0A0K8S633   A0A2W1BGZ9   T1HPX4   A0A076FRM9   A0A194PDZ5   D6W6X3   A0A067QY40   D7EK62   A0A2J7PXT6   A0A3Q0JHS8   A0A067R2R7   A0A0K1YW91   A0A182Q3A3   A0A1B6J3L1   A0A084WK44  

PDB

3ZYV     E-value=6.1147e-06,     Score=115

KEGG

101738479    K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] | (RefSeq) xanthine dehydrogenase 2-lik

PATHWAY

00230    Purine metabolism - Bombyx mori (domestic silkworm)
00232    Caffeine metabolism - Bombyx mori (domestic silkworm)
00983    Drug metabolism - other enzymes - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0071949   GO:0009055   GO:0046872   GO:0051537   GO:0005506   GO:0016491   GO:0016021   GO:0102797   GO:0004031   GO:0102798   GO:0050660   GO:0009115   GO:0004854   GO:0005829   GO:0051536  

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.56076

Exp number, first 60 AAs:

0.45133

Total prob of N-in:

0.10896

outside

1  -  188

 

 

Pi

226.403986

Theta

135.099153

Tajima's D

2.174055

CLR

0.060968

CSRT

0.910604469776511

Interpretation

Uncertain