Gene

KWMTBOMO10693  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008268

Annotation

PREDICTED:_xanthine_dehydrogenase_2-like_[Bombyx_mori]

Location

Bomo_Chr18(+):635010-644594      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.09 PlasmaMembrane   Reliability : 1.433

CDS

ATGGTAACTATGGGAGAATTCCTGCAGACAAACATGCGAGGAACGGTTATATTAAACGTTATGTTGCCTCCTTTGAATAAGACCTATTTGGTTACAACTATGAAGATAATGCCTAAATCCCAAAATGCGCACGCTATAGTCAATGCTGGTTTTCTATACAAATTAGCCAATAATTCGATAGTCACTCAAGCCAGGATCGTCTACAACGGCATCTCACCGACATTCGTAAGGGCTTTAGGAACCGAGAATTTCCTAATCGGAAAACCGTTGTTTAAAAACGAAACTCTTCAGTCGGCTTTGAACATTTTGAAGAAGGATCTGAACGCCACTGAAATGCCTCCCGAACCAAGCCCAGCGTATAGACAGCAGCTGGGTTTGGCAATGTTTTATAAGGGTCTCTTATATTTTTGTCCATCAAACAACATAAATCCGAGGTATCTCTCTGGAGCTACATTTCTCCGTAAGGCAAGACCTTTATCACGTGGAGAGCAAAATTATGAAACAAATGCTGCACTTTGGCCTTTAAATCAGCCAATCCCAAAGTTAGAATCGTTGATACAATGTGCAGGTGAAGCAGAGTATGTGGATGACATACCCTCGCTACCTTATGAAGTATTTGGTGCGTTCGTTTTAAGTACTGTTGCTCTGGGACAGATCGCCTCTATAGACGCTTCAGAAGCTTTGAAAATGAAAGGAGTTATAGCATTCTACACGGCTAAAGACATTCCTGGAAAAAATTCGTTCATTCCAAAAGAAGAGTATAATACGTCAGATGAAGAGATTCTTTGTTCTGGGGACGTCAAATACTATAATCAACCTTTGGGGATAATTGTAGCTGAACTTCAACATATCGCTATAGTCGCTGCTAAAAGTGTTAAAGTCAAGTATACAAATATCCGGAAACCAGTACTAGATATTAGTGATGCTATAAAAGACCCAAAGAGAAATTCAATACTAGTCTCTGTAGACGCAACGACTAGAGGTCATGATACCAGACAAGTTGTCAAAGGAAACGCCACTATTTATGGGCAATACCACTTTAGTATGGAAATTTTAGTTTGTGTAACGCTTTCAACTGAAGAAGGATTACAGGTCTATCCTTCTGTCCAAAATATGGATGGTGTGCAGGCTGTGATATCAAAAGCTTTGAATTTAGACGCTAATAGGATAGACATAAAAGTCCGACGCTTAGGAGGTTCTTACGGTATCAAGGTCACGAGGTCCAACCAAGTAGCTGTGTCGTGCAGTTTGGTATCATTCAAATTGAACAGGCCATGTCGCTTCGTACTTCCACTCTCAACTACTACAAGAGCTTACGGAAAGAGATTTCCGTGTATTGCTGATATGGAAGCTGGAATAAACCGAAGTGGAATAATTCAATACTTAAATTTCAAATTGTACGAAGACAATGGTTATAAAGTAAATGAGATCATACCTTCAATCAGTAGAGATGTTTATAATAACTGCTATGAAAAATCTACGTGGTCATTTCAGTGTATTAATACAATCACCGATACTGCTAAAAACAGCTGGTTCAGAGCACCTGGCACACTAGAGGCTGTGTCATTCGTTGAATTATTCATGGACAGAATTGCCTACGAAGCAAATTTAGATCCTATAGAATTAAGGCTTGCTAACTTAGATCCAGAACATAAAGATCTAAGAGAAATGCTTGACACTTTAATGAAGGAATCCAAATATAAAGAACGAAGAAAAGCAGTTGAAATTTTTAATAAGAATAACAGATGGCTGAAAAAGGGATTGCGTTTTAGTTTCTTGAAATGGGCTAGCACTATTGCCCCTTATTTTGATGTAAATATATCAGTTTATCATGTAGACGGTACTGTGTCATTGACCCATGGCGGAATAGAAATGGGTCAAGGTATAAACACAAAAGCAGCACAGATCTGTGCGTATTTTCTAAAAGTCCCGTTAGAAAAAGTTCAAGTTAAAGCAACGAATACCAATACCTGTCCCAACAGCTCTATTACTGCTGGTAGCTTTACGATACTTAGTATAGGAATAGGTGTTGAGAGGAGTTGCAAAGATTTGTTGCAGAGATTGGAACCGATCAGATCCAAAATGCCTTATGCCACGTGGCAAGAATTGATAGCCAAAGCGTTTGAAGAAAATGTTGATTTACAAGCTCACGGCTTCGTAAATAGGAATGATGTTGTTGCACAAAAATATAATATTTACGGTATAACACTGTCTGAAGTTTTAATTGATGTACTTACCGGAGAATATGAAGTGCTTCGAGTAGATATACTGGAGGATGTCGGTCAAAGTGTCAGTCCCGAGATTGATGTTGGACAAATAGAAGGGGCTTTCATTATGGGCTTAGGATACTGGACCACAGAGAGACTAGTCTATGACAAGAAGACCGGAGAACTACTGACCGATACTTCTTGGACTTACTATGTTCCACAAGCGCGAGATATACCGCAGGACATGAGAGTTTATTTCAGAAAGAATTCTTATAGTAACCGACCCAGTTTTGGATCTAAAAGTTCGTAA

Protein

MVTMGEFLQTNMRGTVILNVMLPPLNKTYLVTTMKIMPKSQNAHAIVNAGFLYKLANNSIVTQARIVYNGISPTFVRALGTENFLIGKPLFKNETLQSALNILKKDLNATEMPPEPSPAYRQQLGLAMFYKGLLYFCPSNNINPRYLSGATFLRKARPLSRGEQNYETNAALWPLNQPIPKLESLIQCAGEAEYVDDIPSLPYEVFGAFVLSTVALGQIASIDASEALKMKGVIAFYTAKDIPGKNSFIPKEEYNTSDEEILCSGDVKYYNQPLGIIVAELQHIAIVAAKSVKVKYTNIRKPVLDISDAIKDPKRNSILVSVDATTRGHDTRQVVKGNATIYGQYHFSMEILVCVTLSTEEGLQVYPSVQNMDGVQAVISKALNLDANRIDIKVRRLGGSYGIKVTRSNQVAVSCSLVSFKLNRPCRFVLPLSTTTRAYGKRFPCIADMEAGINRSGIIQYLNFKLYEDNGYKVNEIIPSISRDVYNNCYEKSTWSFQCINTITDTAKNSWFRAPGTLEAVSFVELFMDRIAYEANLDPIELRLANLDPEHKDLREMLDTLMKESKYKERRKAVEIFNKNNRWLKKGLRFSFLKWASTIAPYFDVNISVYHVDGTVSLTHGGIEMGQGINTKAAQICAYFLKVPLEKVQVKATNTNTCPNSSITAGSFTILSIGIGVERSCKDLLQRLEPIRSKMPYATWQELIAKAFEENVDLQAHGFVNRNDVVAQKYNIYGITLSEVLIDVLTGEYEVLRVDILEDVGQSVSPEIDVGQIEGAFIMGLGYWTTERLVYDKKTGELLTDTSWTYYVPQARDIPQDMRVYFRKNSYSNRPSFGSKSS

Cofactor

FAD
Mo-molybdopterin
[2Fe-2S] cluster

Uniprot

H9JFH1   A0A2A4JUF7   H9JFE7   A0A194PIT3   A0A2A4JU78   A0A0N0PD45   + More
A0A2W1BG03   A0A194PE80   A0A2H1VNQ0   A0A2W1BJJ3   A0A2W1BIE3   A0A3S2PBH0   A0A2A4IRV9   A0A2H1V2I4   A0A2A4ITB4   A0A1X9ZM11   A0A3S2NDD1   A0A2H1VA65   A0A194PDB3   A0A0N1IAK3   A0A2A4ISI6   A0A194PCQ5   A0A2W1BHI1   A0A2W1BIK1   A0A2H1V6B6   A0A2H1VEC0   A0A0L7L3S0   A0A0L7L4E9   A0A212EZ25   A0A0F7QHK5   A0A1X9ZM28   A0A0F7QJW1   A0A0N0PF58   A0A194QCB6   H9JFX1   A0A2A4ITG3   A0A076FX80   A0A194QUG5   A0A194QBY5   A0A2A4JB30   A0A2A4JXM9   A0A0L7L4A2   A0A2H1VH28   A0A0F7QEA3   A0A2H1VCW8   A0A0F7QJV6   A0A2H1VSX5   H9JFZ2   A0A2A4JX39   A0A076FRA1   A0A2A4JY06   A0A3S2NMY0   A0A2A4JYR8   A0A0H4TD12   A0A3S2NTK8   H9JFX4   A0A0N0BES0   A0A212FKB8   A0A1X9ZM23   A8TUB4   A0A1X9ZLZ6   A8TUC0   A0A194PDZ5   A0A2H1V7P8   A0A1U9X1S0   A0A194QMP0   A0A0F7QEA1   A0A0F7QIE0   S5FPI8   A0A1L8D6P5   A0A195E3I3   A0A212F2C6   A0A2A3E4V2   V9IH93   A0A194PIN2   A0A154PJ92   A0A067QY40   A0A076FRM9   A0A151X3M2   A0A1B6E3D0   A0A0L7R0P8   A0A2J7R4N3   A0A0L7L438   A0A087ZYD0   D7EK61   E2BEN6   A0A2H1VIZ6   T1I1X5   A0A310SF38   Q16T45   A0A2H1WDE7   E2ANE4   T1HPX4   A0A195CT20   A0A0H4TY60   A0A1B6CM27   A0A1B6CFX7   A0A023F0C3   D7EK62   A0A2H1VUX4  

Pubmed

19121390    26354079    28756777    26227816    22118469    25803580    + More
24817326    26778204    17904312    23826341    24845553    18362917    19820115    20798317    17510324    25474469   

EMBL

BABH01034958    BABH01034959    BABH01034960    BABH01034961    BABH01034962    BABH01034963    + More
BABH01034964    BABH01034965    NWSH01000648    PCG75032.1    BABH01034979    BABH01034980    BABH01034981    KQ459606    KPI91000.1    PCG75033.1    KQ460326    KPJ15694.1    KZ150165    PZC72655.1    KPI90999.1    ODYU01003306    SOQ41884.1    KZ150135    PZC72996.1    PZC72997.1    RSAL01000123    RVE46648.1    NWSH01007964    PCG62737.1    ODYU01000376    SOQ35055.1    PCG62736.1    KY595781    ARS46835.1    RSAL01000088    RVE48202.1    ODYU01001481    SOQ37735.1    KPI90998.1    KPJ15693.1    PCG62735.1    KPI90997.1    PZC72657.1    PZC72656.1    ODYU01000882    SOQ36316.1    ODYU01002094    SOQ39169.1    JTDY01003126    KOB70107.1    JTDY01003022    KOB70290.1    AGBW02011403    OWR46707.1    LC017755    BAR64769.1    KY595780    ARS46834.1    LC017758    BAR64772.1    KQ459674    KPJ20482.1    KQ459193    KPJ03064.1    BABH01001558    NWSH01007172    PCG63055.1    KF960794    AII21996.1    KQ461154    KPJ08620.1    KPJ03063.1    NWSH01002143    PCG69059.1    NWSH01000413    PCG76559.1    JTDY01003017    KOB70302.1    ODYU01002537    SOQ40155.1    LC017757    BAR64771.1    ODYU01001878    SOQ38698.1    LC017753    BAR64767.1    ODYU01004253    SOQ43930.1    BABH01001657    BABH01001658    BABH01001659    BABH01001660    PCG76561.1    KF960795    AII21997.1    PCG76558.1    RSAL01000229    RVE43893.1    PCG76560.1    KP899546    AKQ06145.1    RVE48204.1    BABH01001568    BABH01001569    BABH01001570    BABH01001571    BABH01001572    BABH01001573    KQ435826    KOX72014.1    AGBW02008082    OWR54176.1    KY595779    ARS46833.1    EU073423    ABW71271.1    KY595778    ARS46832.1    EU073424    ABW71272.1    KPI90909.1    ODYU01001109    SOQ36868.1    KY643683    AQY62686.1    KQ461196    KPJ06614.1    LC017752    BAR64766.1    LC017754    BAR64768.1    KC952900    AGQ43599.1    GEYN01000003    JAV02126.1    KQ979701    KYN19698.1    AGBW02010767    OWR47879.1    KZ288369    PBC26783.1    JR045677    AEY60027.1    KPI90950.1    KQ434912    KZC11368.1    KK852888    KDR14320.1    KF960796    AII21998.1    KQ982557    KYQ55015.1    GEDC01004862    JAS32436.1    KQ414670    KOC64413.1    NEVH01007404    PNF35793.1    JTDY01003130    KOB70096.1    KQ971466    EFA13012.2    GL447829    EFN85870.1    ODYU01002835    SOQ40809.1    ACPB03005165    KQ769812    OAD52839.1    CH477659    EAT37664.1    ODYU01007852    SOQ50986.1    GL441193    EFN65044.1    ACPB03021369    ACPB03021370    KQ977306    KYN03667.1    KP899547    AKQ06146.1    GEDC01022855    JAS14443.1    GEDC01024956    JAS12342.1    GBBI01004413    JAC14299.1    DS497731    EFA13013.1    ODYU01004588    SOQ44620.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000283053    UP000037510    + More
UP000007151    UP000053105    UP000078492    UP000242457    UP000076502    UP000027135    UP000075809    UP000053825    UP000235965    UP000005203    UP000007266    UP000008237    UP000015103    UP000008820    UP000000311    UP000078542   

PRIDE

H9JFH1    H9JFE7    H9JFX1    H9JFZ2    H9JFX4    A8TUB4    + More
A8TUC0   

Pfam

PF02738   Ald_Xan_dh_C2        + More
PF01315   Ald_Xan_dh_C
PF03450   CO_deh_flav_C
PF00111   Fer2
PF00941   FAD_binding_5
PF01799   Fer2_2
PF01130   CD36
PF07651   ANTH

Interpro

IPR000674   Ald_Oxase/Xan_DH_a/b        + More
IPR002888   2Fe-2S-bd       
IPR036884   2Fe-2S-bd_dom_sf       
IPR005107   CO_DH_flav_C       
IPR008274   AldOxase/xan_DH_Mopterin-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR001041   2Fe-2S_ferredoxin-type       
IPR036010   2Fe-2S_ferredoxin-like_sf       
IPR036683   CO_DH_flav_C_dom_sf       
IPR036856   Ald_Oxase/Xan_DH_a/b_sf       
IPR006058   2Fe2S_fd_BS       
IPR016166   FAD-bd_PCMH       
IPR002346   Mopterin_DH_FAD-bd       
IPR037165   AldOxase/xan_DH_Mopterin-bd_sf       
IPR016208   Ald_Oxase/xanthine_DH       
IPR016169   FAD-bd_PCMH_sub2       
IPR012675   Beta-grasp_dom_sf       
IPR002159   CD36_fam       
IPR013809   ENTH       
IPR008942   ENTH_VHS       
IPR011417   ANTH_dom       
IPR014712   Clathrin_AP_dom2       

SUPFAM

SSF54665   SSF54665        + More
SSF54292   SSF54292       
SSF55447   SSF55447       
SSF56176   SSF56176       
SSF56003   SSF56003       
SSF47741   SSF47741       
SSF48464   SSF48464       

Gene 3D

3.10.20.30     3.30.465.10     1.20.58.150     1.25.40.90    

CDD

cd00207  fer2

ProteinModelPortal

H9JFH1   A0A2A4JUF7   H9JFE7   A0A194PIT3   A0A2A4JU78   A0A0N0PD45   + More
A0A2W1BG03   A0A194PE80   A0A2H1VNQ0   A0A2W1BJJ3   A0A2W1BIE3   A0A3S2PBH0   A0A2A4IRV9   A0A2H1V2I4   A0A2A4ITB4   A0A1X9ZM11   A0A3S2NDD1   A0A2H1VA65   A0A194PDB3   A0A0N1IAK3   A0A2A4ISI6   A0A194PCQ5   A0A2W1BHI1   A0A2W1BIK1   A0A2H1V6B6   A0A2H1VEC0   A0A0L7L3S0   A0A0L7L4E9   A0A212EZ25   A0A0F7QHK5   A0A1X9ZM28   A0A0F7QJW1   A0A0N0PF58   A0A194QCB6   H9JFX1   A0A2A4ITG3   A0A076FX80   A0A194QUG5   A0A194QBY5   A0A2A4JB30   A0A2A4JXM9   A0A0L7L4A2   A0A2H1VH28   A0A0F7QEA3   A0A2H1VCW8   A0A0F7QJV6   A0A2H1VSX5   H9JFZ2   A0A2A4JX39   A0A076FRA1   A0A2A4JY06   A0A3S2NMY0   A0A2A4JYR8   A0A0H4TD12   A0A3S2NTK8   H9JFX4   A0A0N0BES0   A0A212FKB8   A0A1X9ZM23   A8TUB4   A0A1X9ZLZ6   A8TUC0   A0A194PDZ5   A0A2H1V7P8   A0A1U9X1S0   A0A194QMP0   A0A0F7QEA1   A0A0F7QIE0   S5FPI8   A0A1L8D6P5   A0A195E3I3   A0A212F2C6   A0A2A3E4V2   V9IH93   A0A194PIN2   A0A154PJ92   A0A067QY40   A0A076FRM9   A0A151X3M2   A0A1B6E3D0   A0A0L7R0P8   A0A2J7R4N3   A0A0L7L438   A0A087ZYD0   D7EK61   E2BEN6   A0A2H1VIZ6   T1I1X5   A0A310SF38   Q16T45   A0A2H1WDE7   E2ANE4   T1HPX4   A0A195CT20   A0A0H4TY60   A0A1B6CM27   A0A1B6CFX7   A0A023F0C3   D7EK62   A0A2H1VUX4  

PDB

3BDJ     E-value=6.15579e-102,     Score=950

KEGG

101738479    K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] | (RefSeq) xanthine dehydrogenase 2-lik

GO

GO:0071949   GO:0009055   GO:0046872   GO:0051537   GO:0005506   GO:0016491   GO:0050660   GO:0016021   GO:0102797   GO:0004031   GO:0102798   GO:0009115   GO:0004854   GO:0005829   GO:0030276   GO:0048268   GO:0030136   GO:0005545   GO:0003824   GO:0016614   GO:0051536   GO:0055114  

Length:

838

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.28184

Exp number, first 60 AAs:

0.19667

Total prob of N-in:

0.01030

outside

1  -  838

 

 

Pi

275.360016

Theta

181.947967

Tajima's D

1.719141

CLR

0.231089

CSRT

0.834758262086896

Interpretation

Uncertain