Gene

KWMTBOMO10688  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008247

Annotation

lectin_5_precursor_[Bombyx_mori]

Location

Bomo_Chr18(-):490136-498719      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.255 Extracellular   Reliability : 1.795

CDS

ATGAGACTGTTAGCTATTTCCTTCTTTTTCATAGCTATCGCATATGTGCAGTCGCAGCCAACTGATGGTTACGTGCTAGAAAAGGATGTTGGTATAGCCTACAAACTGGTGTATCAAGCACAAAACTGGACTAAAGCTAAGGAATATTGTGAACAAGAAGGCGCTAAATTAGCTGTACCTAAATCTGAGGAAGAATTCGCTTTAATACAAAAAATAGTTCGACACATGCACTTTCCCAGTGTGGTTAACGCCGAAATCAAACTTATCGCTTGGCTGGGCATCAACAACCTGGAAAATTACAAAGTCTGGAAGAATATCGATGGTCAAAACATTGAAGACACCGGATTCCACACTTGGACGGGTCAAGATAACGGTCGCGGCTACAGGTAA

Protein

MRLLAISFFFIAIAYVQSQPTDGYVLEKDVGIAYKLVYQAQNWTKAKEYCEQEGAKLAVPKSEEEFALIQKIVRHMHFPSVVNAEIKLIAWLGINNLENYKVWKNIDGQNIEDTGFHTWTGQDNGRGYR

Uniprot

Q2F680   H9AA73   A0A096ZGW6   A0A2H1VD46   A0A3S2TI37   A0A0N1PJT9   + More
A0A2W1CJR2   Q5MGE0   A0A194PCQ9   A0A2A4J6H8   A0A2A4J5I5   A0A2A4J741   A0A0L7LIB2   A0A2P8ZAM2   A0A2P8XY97   A0A2P8ZAM1   K7IYP7   P92051   A0A2P8YTT8   H9IYF4   E2A499   A0A232FNK3   A0A219YXH1   A0A3S2L7M4   A0A2J7PIR5   A0A2J7PIN6   K7IYQ0   A0A2P8XYB3   A0A1E1WPZ3   E2A953   A0A212FF49   O97363   A0A2P8YTU3   A0A096ZGV4   A0A232EJ13   A0A1E1WQ86   A0A219YXH0   C3Y8B6   A0A067RDH2   A0A154PEK8   A0A0L7LSY5   K7JJQ9   A0A3B4WIS3   A0A067QRS2   A0A2P8XYA2   A0A195AXC0   C3Y8B5   A0A0L7KUN5   A0A067QLS5   A0A2A4J4S6   A0A158NLT8   Q5UAW7   H9IYF5   A0A182C5Y9   F4W737   A0A2P8YIC7   A0A0L7KP44   E2B3W3   A0A195DB50   C3Y6K2   A0A3S2L865   A0A3S2P588   Q9Y098   A0A2A4IWU7   A0A2P8YAS1   D2X2F6   A0A195F6E7   C3Y3G7   K7IYQ2   I1VR06   I1VR03   A0A194QHR4   B1A5Z5   A0A151X1C6   A0A026W9Y2   A0A151J0D1   E9JBY2   A0A151X7Z2   O96359   A0A2P8YDQ5   A0A3G1HH66   A0A1L8H2P2   A0A3Q1H7C1   A0A2J7QT22   A0A3G1HH41   A0A2P8ZD82   A0A194PE23   C3YZP6   A0A194RMJ4   A0A1E1W152   Q5UAW8   A0A067RF70  

Pubmed

26354079    28756777    16023793    26227816    29403074    20075255    + More
8814782    19121390    20798317    28648823    22118469    9310381    9989592    18563158    24845553    21347285    16640722    21719571    9887514    22516747    24508170    21282665    9818384    27762356    15763465   

EMBL

DQ311192    ABD36137.1    JN880425    AFC35298.1    KF752423    AIR96002.1    + More
ODYU01001897    SOQ38747.1    RSAL01000123    RVE46644.1    KQ460326    KPJ15697.1    KZ150135    NHMN01024278    PZC73002.1    PZC87399.1    AY829846    AAV91460.1    KQ459606    KPI91002.1    NWSH01002900    PCG67346.1    PCG67345.1    PCG67344.1    JTDY01000956    KOB75288.1    PYGN01000122    PSN53548.1    PYGN01001171    PSN36991.1    PSN53543.1    D49517    BAA18918.1    PYGN01000363    PSN47668.1    BABH01020449    GL436601    EFN71740.1    NNAY01000008    OXU32090.1    KX550126    AQY54443.1    RSAL01001432    RVE40792.1    NEVH01025015    PNF16204.1    PNF16206.1    PSN36987.1    GDQN01002077    JAT88977.1    GL437711    EFN70038.1    AGBW02008849    OWR52366.1    AJ011573    CAB38429.1    PSN47671.1    KF752421    AIR96000.1    NNAY01004147    OXU18298.1    GDQN01002063    JAT88991.1    KX550127    AQY54444.1    GG666491    EEN63353.1    KK852771    KDR16864.1    KQ434889    KZC10283.1    JTDY01000152    KOB78578.1    KK853394    KDR07896.1    PSN36990.1    KQ976716    KYM76836.1    EEN63352.1    JTDY01005614    KOB66830.1    KK853186    KDR10087.1    NWSH01002983    PCG67147.1    ADTU01002193    AY768812    AAV41237.2    BABH01020450    GEHL01006916    JAS03148.1    GL887802    EGI70027.1    PYGN01000574    PSN44007.1    JTDY01008126    KOB64724.1    GL445407    EFN89632.1    KQ981042    KYN10096.1    GG666488    EEN63962.1    RSAL01000824    RVE41129.1    RSAL01000019    RVE52735.1    D49510    BAA82265.1    NWSH01005098    PCG64437.1    PYGN01000749    PSN41356.1    GQ487489    ADB12587.1    KQ981805    KYN35634.1    GG666483    EEN65234.1    JQ269657    AFI47452.1    JQ269654    AFI47449.1    KQ458793    KPJ05052.1    EU426550    ABZ81710.1    KQ982585    KYQ54209.1    KK107320    EZA52778.1    KQ980629    KYN14965.1    GL771642    EFZ09671.1    KQ982431    KYQ56496.1    AF023275    AAD09286.1    PYGN01000676    PSN42392.1    KY111312    AQX37248.1    CM004470    OCT90367.1    NEVH01011202    PNF31739.1    KY111311    AQX37247.1    PYGN01000093    PSN54454.1    KPI91591.1    GG666566    EEN54317.1    KQ459984    KPJ19048.1    GDQN01010324    JAT80730.1    AY768811    AAV41236.1    KK852726    KDR17640.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000037510    UP000245037    + More
UP000002358    UP000005204    UP000000311    UP000215335    UP000235965    UP000007151    UP000001554    UP000027135    UP000076502    UP000261360    UP000078540    UP000005205    UP000007755    UP000008237    UP000078492    UP000078541    UP000075809    UP000053097    UP000186698    UP000265040   

PRIDE

Q2F680    H9IYF4    O97363    H9IYF5    D2X2F6   

Pfam

PF00059   Lectin_C        + More
PF00779   BTK
PF00169   PH
PF00051   Kringle

Interpro

IPR016187   CTDL_fold        + More
IPR018378   C-type_lectin_CS       
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       
IPR001562   Znf_Btk_motif       
IPR028840   BMX       
IPR033989   CD209-like_CTLD       
IPR018056   Kringle_CS       
IPR000001   Kringle       
IPR038178   Kringle_sf       
IPR013806   Kringle-like       

SUPFAM

SSF56436   SSF56436        + More
SSF57440   SSF57440       

Gene 3D

3.10.100.10     2.30.29.30     2.40.20.10    

CDD

cd03590  CLECT_DC-SIGN_like
cd00108  KR

ProteinModelPortal

Q2F680   H9AA73   A0A096ZGW6   A0A2H1VD46   A0A3S2TI37   A0A0N1PJT9   + More
A0A2W1CJR2   Q5MGE0   A0A194PCQ9   A0A2A4J6H8   A0A2A4J5I5   A0A2A4J741   A0A0L7LIB2   A0A2P8ZAM2   A0A2P8XY97   A0A2P8ZAM1   K7IYP7   P92051   A0A2P8YTT8   H9IYF4   E2A499   A0A232FNK3   A0A219YXH1   A0A3S2L7M4   A0A2J7PIR5   A0A2J7PIN6   K7IYQ0   A0A2P8XYB3   A0A1E1WPZ3   E2A953   A0A212FF49   O97363   A0A2P8YTU3   A0A096ZGV4   A0A232EJ13   A0A1E1WQ86   A0A219YXH0   C3Y8B6   A0A067RDH2   A0A154PEK8   A0A0L7LSY5   K7JJQ9   A0A3B4WIS3   A0A067QRS2   A0A2P8XYA2   A0A195AXC0   C3Y8B5   A0A0L7KUN5   A0A067QLS5   A0A2A4J4S6   A0A158NLT8   Q5UAW7   H9IYF5   A0A182C5Y9   F4W737   A0A2P8YIC7   A0A0L7KP44   E2B3W3   A0A195DB50   C3Y6K2   A0A3S2L865   A0A3S2P588   Q9Y098   A0A2A4IWU7   A0A2P8YAS1   D2X2F6   A0A195F6E7   C3Y3G7   K7IYQ2   I1VR06   I1VR03   A0A194QHR4   B1A5Z5   A0A151X1C6   A0A026W9Y2   A0A151J0D1   E9JBY2   A0A151X7Z2   O96359   A0A2P8YDQ5   A0A3G1HH66   A0A1L8H2P2   A0A3Q1H7C1   A0A2J7QT22   A0A3G1HH41   A0A2P8ZD82   A0A194PE23   C3YZP6   A0A194RMJ4   A0A1E1W152   Q5UAW8   A0A067RF70  

PDB

1V7P     E-value=0.00348449,     Score=88

KEGG

692824    no KO assigned | (RefSeq) lectin 5

GO

GO:0030246   GO:0016021   GO:0035556   GO:0016301   GO:0004252  

PANTHER

PTHR24418:SF91  

SignalP

Position:   1 - 18,         Likelihood:  0.997577

 

 

Length:

129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21397

Exp number, first 60 AAs:

0.15227

Total prob of N-in:

0.03281

outside

1  -  129

 

 

Pi

298.215222

Theta

166.643333

Tajima's D

2.085218

CLR

0.134424

CSRT

0.894605269736513

Interpretation

Uncertain