Silkworm Genome Informatics Database

Gene

KWMTBOMO10684

Pre Gene Modal

BGIBMGA008266

Annotation

PAR_domain_protein_1?_partial_[Operophtera_brumata]

Location

Bomo_Chr18(+):444780-445621 View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear Reliability : 4.224

CDS

ATGGCTCTCTGGACGCCCTATGCGCAAGAATCGGCTCTGGACTTGAGCAAGACCAGAGTCAAATTAGAAAGGAAGTCTCCCGATTTGCCTGTGACAAATTCTTCGCCGCCAGCCTCTGGGTTTCTTTATCAAGATTATCAACCGTACTACGTGAATTATTCGCCGGTTCGACCCGTGCACGCTGTGCCTTCTGTGTCACCGGAGTCTACTGGTTCTTGGACTCAATATCCTCTCCCGCCTTCGATCGGAAACAGTCGGTCTCCACCGCCGGGCTCGCCTGAATTCTACGAGATGGATTCCCTGACAGACGACTATGAATATCAAGAGTTTGAGAGAGACGCTTTCCGTGCTATGGCTGAGAAGAACGGTGGAAGCTTATTGGGGAACAATCCTCGCATGAGGAGAGCCGTGCAGACTAATCAGACGGCTGACGACACATACAGGAAGCAGCGGGAGAGAAACAACTTCGCGGCCAAGCAGAGCAGAGATCGGAGGAAGATGAGAGAAGTGCGTTTGGCTTTTCAAGTCACTTATTTGAAGAAGAAAATGACAGAGATGAAGGCGCGGCTGGCGGCCGATATGTGCAGCAAGTGTGTTCAGACTCGCGATCGCTAG

Protein

MALWTPYAQESALDLSKTRVKLERKSPDLPVTNSSPPASGFLYQDYQPYYVNYSPVRPVHAVPSVSPESTGSWTQYPLPPSIGNSRSPPPGSPEFYEMDSLTDDYEYQEFERDAFRAMAEKNGGSLLGNNPRMRRAVQTNQTADDTYRKQRERNNFAAKQSRDRRKMREVRLAFQVTYLKKKMTEMKARLAADMCSKCVQTRDR

Uniprot

A0A2W1B2G7 A0A2A4J7B7 A0A0L7LKE3 A0A0N1PIE8 A0A194PCR3 A0A212FJC5 + More
A0A2W1B716 A0A0N1IPI2 A0A2A4J7E6 A0A194PCJ5 A0A2A4J5U5 A0A2H1V033 A0A2H1V079 A0A2H1WH95 H9JFH0 A0A2I4CFP4

Pubmed

28756777 26227816 26354079 22118469 19121390

EMBL

KZ150415 PZC70962.1 NWSH01002900 PCG67340.1 JTDY01000800 KOB75834.1 + More
KQ460326 KPJ15700.1 KQ459606 KPI91007.1 AGBW02008274 OWR53857.1 PZC70961.1 KPJ15699.1 PCG67342.1 KPI91006.1 PCG67341.1 ODYU01000074 SOQ34218.1 SOQ34219.1 ODYU01008340 SOQ51844.1 BABH01034948

Proteomes

UP000218220 UP000037510 UP000053240 UP000053268 UP000007151 UP000005204 + More
UP000192220

PRIDE

H9JFH0

Pfam

PF07716 bZIP_2

Interpro

IPR004827   bZIP        + More
IPR040223   PAR_bZIP
IPR029829   HLF

ProteinModelPortal

A0A2W1B2G7 A0A2A4J7B7 A0A0L7LKE3 A0A0N1PIE8 A0A194PCR3 A0A212FJC5 + More
A0A2W1B716 A0A0N1IPI2 A0A2A4J7E6 A0A194PCJ5 A0A2A4J5U5 A0A2H1V033 A0A2H1V079 A0A2H1WH95 H9JFH0 A0A2I4CFP4

PDB

2E42 E-value=0.074456, Score=80

KEGG

NA

GO

GO:0003700 GO:0006357 GO:0016021 GO:0003677 GO:0005634 GO:0006355 GO:0043565 GO:0008270 GO:0006457 GO:0003906 GO:0006285 GO:0019104 GO:0003824

PANTHER

PTHR11988 PTHR11988:SF28

Length:

204

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09925

outside

1 - 204

Pi

219.01774

Theta

189.743534

Tajima's D

0.441714

CLR

0

CSRT

0.499975001249937

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics