Gene

KWMTBOMO10683

Pre Gene Modal

BGIBMGA008249

Annotation

PREDICTED:_protein_Smaug_[Amyelois_transitella]

Location

Bomo_Chr18(-):433774-440609      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.157

CDS

ATGAACGGCACGTTTTATGAGCAGCTGGGGGGTGTAACAGGGGTATTCGAGCAGTGGGGTGCATGCGAAAAGACTGTGACAGCCTGTGTGCTCGCCAGACGGGTCCCTTGGCCAGGACTAAGATTAGTGCAGCGGGCCGTAGAGGCTGCACTTAGGAATCATGTGGAAGACGAACGACTCCAGAGAGACGCGAATGACGAGGCTTTGCTGACGAGCCTCCTCACTACAAGAGGGGACGATGAAGATGACGACGGTGGTGATAGACTATATCAACTCTTAACATTATTACCTCTACTGAACACAGACAACGAACGTGTTAAAGACATTTACATGAATGCTATGCCAGTGTTAGTTCAAAGGTGTGTAGATTCCCCACGAAGAACATCGCTGGCTCCAGAATTATGCAGACAGCTGTTGTCTTACATGCTGGTGCATCCTGCATTAACACATCATGATCAGAGGACATTAACACAGTGGCTGCGTTACTTAGAGAATCACATATCCGGTAACAGAAATACAGAAAGCGTTTGGCAACAACGGATAGACCCCTGTCTCCTTCCTGACACCAATATATGGAGTACAAACAACTCATTCAGAAGAACGATAGGCAAAAATGTTGAATTTCGATGTATTTTAGATCCTTTGGATCAATTCAACAATGATTTACTTCAAGAATCATTCTCTAAGAATGGTCGTGATGTTGATTTAAATTTAGACGGAGACAAATTGTTATTTGAGGCAGCAATAGCCCAACCAAAGTCTCAAAGATCAAATAGTTTAACTCCACCTTCAACGAATTTTCTTCAAATGTCCTCGTCAGCTGAGAATTTGAGTGATGAGCCTTTTGTTCAGAAACCGAGAAGTTTCTCCCTCTCCAGCGAGCACAGCTTGAGCCAAATCAGGCCCATTAGTATAATGTATGGGACAACGGGCAGCGAAACTCGCTTAGATGATCTAAGATCGAATAACTTCACTGAACACCCTGGAATGTCGACTGTTGCTCAGTGGTTGAAAAGTCTAAGGTTGCATAAGTATGTGTGGCTATTCACAAATATAAGCTATGATCAGATGATGGCAATGGATGAAAAGTACTTGGAGAAGCTGGGAGTGACGAAAGGCGCTCGACATAAACTGCTCCTGTCAATAAAGAAGTTGAACGAGCGACCCTCCGTGATGGAAGCGATAGAGACAGAGCTGCAGGGCACTCCGGGGACTGCGGTCGTGGGGCGAGCTCTGGAGAGGCTTCGGGGAGTGTTGCTCAGCCCGATGCCACCTTCAACTGAACTTCCAGGCTCCATTGTCAGGGCCTTGCAACTTGCATCGAAATGCCTGAACAACTCGTCGAACATCAACCACCGTCTGTCTGTGCCCAGCAGCGATGATGACCACGAGCCGCCGGTGGACCCCATGTCCTTACATTGCTGGCTCGTTGAAAAGGCGCTGCACCACGAGTCCTTCAGCTCGGCGAGCCTGCAGGACGGCCTCAAGCGGCTGAGGCACCGCCTGCCGCCCAGACAGTTCTACCGGCACGTGGGCGACATGCCGCACCGACACCGACACGCCAAGCCCAGATGGCGGATGCCTCCACACAACGGGTACCAAAAGCCTCAAAAACGCATATGGAGCTGCAAACCTCAAACGGGCCCCGGTCCCCCCCACCCGCGCCCCAAGTCCCACTCCTACCCCCCATACGTGGGCGCCGCGCCCCCGCGCTGCCCCGCCCGCCCCCCACCCCCAACGACGAATACTCCAGCCTCGACGCGCTGTGTCTACAGATGA

Protein

MNGTFYEQLGGVTGVFEQWGACEKTVTACVLARRVPWPGLRLVQRAVEAALRNHVEDERLQRDANDEALLTSLLTTRGDDEDDDGGDRLYQLLTLLPLLNTDNERVKDIYMNAMPVLVQRCVDSPRRTSLAPELCRQLLSYMLVHPALTHHDQRTLTQWLRYLENHISGNRNTESVWQQRIDPCLLPDTNIWSTNNSFRRTIGKNVEFRCILDPLDQFNNDLLQESFSKNGRDVDLNLDGDKLLFEAAIAQPKSQRSNSLTPPSTNFLQMSSSAENLSDEPFVQKPRSFSLSSEHSLSQIRPISIMYGTTGSETRLDDLRSNNFTEHPGMSTVAQWLKSLRLHKYVWLFTNISYDQMMAMDEKYLEKLGVTKGARHKLLLSIKKLNERPSVMEAIETELQGTPGTAVVGRALERLRGVLLSPMPPSTELPGSIVRALQLASKCLNNSSNINHRLSVPSSDDDHEPPVDPMSLHCWLVEKALHHESFSSASLQDGLKRLRHRLPPRQFYRHVGDMPHRHRHAKPRWRMPPHNGYQKPQKRIWSCKPQTGPGPPHPRPKSHSYPPYVGAAPPRCPARPPPPTTNTPASTRCVYR

Uniprot

H9JFF2   A0A3S2NG23   A0A2A4J627   A0A2W1BH07   A0A212FJD8   A0A0N0PD85   + More
A0A194PDC2   A0A0L7LKV3   A0A1B0C856   A0A1L8DLC3   A0A1L8DL47   A0A1L8DLL0   A0A0L7QNZ4   K7JBD4   A0A0J7LAI3   A0A2A3E3M9   A0A088AAM7   A0A0T6B5V6   A0A195B6H7   A0A158NII7   A0A0M9ADF3   E9ILI8   A0A154PHP0   A0A151XBI9   F4WCJ9   A0A195ESP9   A0A0C9RCR1   A0A3L8D550   A0A195EL93   A0A195C4I9   A0A026VV79   A0A2J7Q4W2   A0A2J7Q4W4   A0A2J7Q4W0   E2C1I0   A0A067RG23   A0A1L8F3Z9   A0A1L8F416   A0A2P8ZKD2   Q58E80   W5NBG9   A0A3Q1JM36   Q4RRR3   U4U7N9   A0A1A8D419   A0A1A7ZZ93   A0A1A8HY69   N6UCL1   A0A2B4SCQ3   A0A1A7YL64   L7MMX7   A0A3M6THM1   A0A226E3L9   A0A1A8HC31   A0A3Q2ZXH0   C3XZ12  

Pubmed

19121390    28756777    22118469    26354079    26227816    20075255    + More
21347285    21282665    21719571    30249741    24508170    20798317    24845553    27762356    29403074    15496914    23537049    25576852    30382153    18563158   

EMBL

BABH01034947    RSAL01000123    RVE46642.1    NWSH01002900    PCG67339.1    KZ150415    + More
PZC70963.1    AGBW02008274    OWR53858.1    KQ460326    KPJ15701.1    KQ459606    KPI91008.1    JTDY01000800    KOB75836.1    AJWK01000196    GFDF01006944    JAV07140.1    GFDF01006943    JAV07141.1    GFDF01006827    JAV07257.1    KQ414843    KOC60335.1    AAZX01010565    LBMM01000123    KMR04843.1    KZ288392    PBC26337.1    LJIG01009624    KRT82708.1    KQ976582    KYM79862.1    ADTU01001809    KQ435695    KOX80869.1    GL764086    EFZ18564.1    KQ434908    KZC11322.1    KQ982327    KYQ57699.1    GL888070    EGI68179.1    KQ981979    KYN31275.1    GBYB01009733    GBYB01014364    GBYB01014365    GBYB01014367    JAG79500.1    JAG84131.1    JAG84132.1    JAG84134.1    QOIP01000013    RLU15354.1    KQ978739    KYN28901.1    KQ978292    KYM95525.1    KK107796    EZA47683.1    NEVH01018373    PNF23620.1    PNF23621.1    PNF23622.1    GL451937    EFN78156.1    KK852484    KDR22826.1    CM004481    OCT66331.1    OCT66332.1    PYGN01000030    PSN56961.1    BC092035    AAH92035.1    AHAT01023721    CAAE01015002    CAG08919.1    KB632144    ERL89087.1    HADZ01021660    HAEA01000160    SBP85601.1    HADY01008805    HAEJ01003127    SBP47290.1    HAED01003495    HAEE01004461    SBQ89478.1    APGK01040510    KB740981    ENN76387.1    LSMT01000109    PFX27156.1    HADW01019734    HADX01009130    SBP31362.1    GACK01000090    JAA64944.1    RCHS01003561    RMX40880.1    LNIX01000007    OXA52029.1    HAEB01008894    HAEC01012542    SBQ80759.1    GG666475    EEN66576.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000092461    UP000053825    UP000002358    UP000036403    UP000242457    UP000005203    UP000078540    UP000005205    UP000053105    UP000076502    UP000075809    UP000007755    UP000078541    UP000279307    UP000078492    UP000078542    UP000053097    UP000235965    UP000008237    UP000027135    UP000186698    UP000245037    UP000018468    UP000265040    UP000030742    UP000019118    UP000225706    UP000275408    UP000198287    UP000264800    UP000001554   

PRIDE

H9JFF2   

Pfam

PF00536   SAM_1        + More
PF09246   PHAT

Interpro

IPR013761   SAM/pointed_sf        + More
IPR001660   SAM       
IPR037634   Smaug_SAM       
IPR037093   PHAT_dom_sf       
IPR016024   ARM-type_fold       
IPR015327   PHAT_dom       

SUPFAM

SSF47769   SSF47769        + More
SSF48371   SSF48371       

Gene 3D

1.10.150.50     1.25.40.170    

CDD

cd09557  SAM_Smaug

ProteinModelPortal

H9JFF2   A0A3S2NG23   A0A2A4J627   A0A2W1BH07   A0A212FJD8   A0A0N0PD85   + More
A0A194PDC2   A0A0L7LKV3   A0A1B0C856   A0A1L8DLC3   A0A1L8DL47   A0A1L8DLL0   A0A0L7QNZ4   K7JBD4   A0A0J7LAI3   A0A2A3E3M9   A0A088AAM7   A0A0T6B5V6   A0A195B6H7   A0A158NII7   A0A0M9ADF3   E9ILI8   A0A154PHP0   A0A151XBI9   F4WCJ9   A0A195ESP9   A0A0C9RCR1   A0A3L8D550   A0A195EL93   A0A195C4I9   A0A026VV79   A0A2J7Q4W2   A0A2J7Q4W4   A0A2J7Q4W0   E2C1I0   A0A067RG23   A0A1L8F3Z9   A0A1L8F416   A0A2P8ZKD2   Q58E80   W5NBG9   A0A3Q1JM36   Q4RRR3   U4U7N9   A0A1A8D419   A0A1A7ZZ93   A0A1A8HY69   N6UCL1   A0A2B4SCQ3   A0A1A7YL64   L7MMX7   A0A3M6THM1   A0A226E3L9   A0A1A8HC31   A0A3Q2ZXH0   C3XZ12  

PDB

1OXJ     E-value=1.69132e-22,     Score=264

KEGG

101736320    no KO assigned | (RefSeq) protein Smaug

GO

GO:0003723   GO:0043488   GO:0030371   GO:0006355   GO:0016021   GO:0000932   GO:0017148   GO:0000289   GO:0003729   GO:0005515   GO:0008270   GO:0006457   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824  

Length:

592

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.00047

outside

1  -  592

 

 

Pi

249.088048

Theta

172.539582

Tajima's D

1.653888

CLR

0.282448

CSRT

0.818259087045648

Interpretation

Uncertain