SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10677
Pre Gene Modal
BGIBMGA008263
Annotation
PREDICTED:_zinc_finger_protein_697-like_[Plutella_xylostella]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.339
 

Sequence

CDS
ATGGAAGATATTAATGAGAAAACGTGTAGAATATGTTTTCAAACCAAAGAAGTAGTATTTCCTTTGTTCGAAAAGCAAGCTGGAAGCGATGTTTCACATTACGAAAGACTTGTAAAAAAGACGAAATTACAGATTGAAGTAGATGATATTGGTCCTACTTCTATTTGTTCCGAGTGCCTCACTGAACTGGACACAACAGTGACTTTCTTGGAAAAATGCGAGCGTTCTAATCGAGTGCTAGCAGCTACTTATGTGAGAGGATTCAATGATTACTCTAACTTCAGATTTGAGACTACTGGAGTGGAATATATTGAATACAGGGTAGTTGAGACTCCGGAGGAATCAAGTACACCGAGAGGTGAAGAGCAAAGTGAAGAAGCAGTCCGAGGACTTCGTAGACACGTATCAAGTTGTTCCCAATGCGGTTCCAAACGGCGTTGTCGTCACAGAGCCCAGTCCTCTCACACATGCCAGTTTTGCTCTAAAGTATTTACTAGAAAATTCAATTTCCTATTACATGTCAAACGTCACTTAGGACAGCGTGATTGGACATGCCCGGGCTGTGGTGCATTACAATTGACACGTTGGCATGCTGAGCGACACTGCAAGCCCAAGACACGCCACATGTGCTCTGTCTTGGGCTGTGGTAAGATGTTCACAACGAAGACGAATCTCAACATTCATGTACGGACACATAATGGTGAACGCCCCTTTGAGTGCAGCCACTGCAAAAAGACATTCACAAGCAAGAATACTTTAAAGGATCACATTAGGATTCACACGGGAGAGAAACCGTACATGTGTCCCGTGTGCGGCCAGCAGTTCGCTACCAACAAGCTGTCGAGCCACATGTGGCGGCACCGCAGGCCCGGGCTCCGGCCCCGCGCTCCCCGGGCGCCGCCCCCCGCGCCCGTCGCCTGCCTGTACTGCGGCGCCAAGTACCACCATCGTCAGTCGCTCAACAAGCACGTAAAGAAGCAACATCAACAGGTAAGCGGCCACGAATATTGCGCATTAGTGCGAATTGGGCAATATTAA
Protein
MEDINEKTCRICFQTKEVVFPLFEKQAGSDVSHYERLVKKTKLQIEVDDIGPTSICSECLTELDTTVTFLEKCERSNRVLAATYVRGFNDYSNFRFETTGVEYIEYRVVETPEESSTPRGEEQSEEAVRGLRRHVSSCSQCGSKRRCRHRAQSSHTCQFCSKVFTRKFNFLLHVKRHLGQRDWTCPGCGALQLTRWHAERHCKPKTRHMCSVLGCGKMFTTKTNLNIHVRTHNGERPFECSHCKKTFTSKNTLKDHIRIHTGEKPYMCPVCGQQFATNKLSSHMWRHRRPGLRPRAPRAPPPAPVACLYCGAKYHHRQSLNKHVKKQHQQVSGHEYCALVRIGQY

Summary

Pfam
PF07776   zf-AD        + More
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
PDB
2I13     E-value=9.66311e-17,     Score=212

Ontologies

Topology

Length:
345
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00155
Exp number, first 60 AAs:
0
Total prob of N-in:
0.08150
outside
1  -  345
 
 

Population Genetic Test Statistics

Pi
272.297201
Theta
195.564916
Tajima's D
0.921979
CLR
0.080379
CSRT
0.637018149092545
Interpretation
Uncertain
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