SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10672  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008255
Annotation
_putative_cuticle_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.611 PlasmaMembrane   Reliability : 1.017
 

Sequence

CDS
ATGAGATCCTTTGTTTTAATCTGTGCCCTCGTGGCCATTGCCGCCGCCGCCAAGACAGAAGACAAGGCCGCACGTGACAAGCGTAGCTTCTTCCACGGACTCGGCTACGACTCCAACTATGGATCCACCTTCGGCTACGGCAGCGGCTACCAGAACTTAGGAGGCCTCGGCTACTCCGGCTACTCCTCTCCCTCCGTCTACTCCTCTCCCTCGTCTTACAGCTACTCCACCCCGGCTGTCAGCTCTTACGGCTACACGTCTCCCGCCGTCAGCTATGCTAACGCTGGATACCGGTACGCCAGCCCCGCCTACAGCTACGCCGCCCCGGCCTTCTCCGCCGCCAGCTACGCCGCCCCCGTCTACTCCGCCGCCAGCTACGCCGCCCCCGCCTACTCCGCCGCCAGCTACGCTCCTGCCGTCAGCTCTTACGGCTACAGCACACCTCAAGTGCGTTACTCATCTGCCCCAGCAGTCAGCTACTCCAGTTTCACATCAGTTCCCTCTGTGAAGTACGCAGCCGCCCCCGCCGTGAGCTACTCTGCTGCCCCCGCCGTGAGCTACTCTGCTGCCCCCGCCGTGAGCTACTCTGCTGCCCCCGCCGTGAGCTACTCTGCTGCCCCGGCTCTGAGCTACTCCGCCGTTGCACCCGCTGTGAAATACAGAGCTGCCCCCGCCGTGAGCTACTCTGCTGCCCCGGCTCTGAGCTACTCTGCCGTCGCTCCCGCCGTGAAATACAGCGCCGCTCCTGCCGTCAGCTACACCGCTCCAATCTCCTACACCGCCCCGGCTGTGAGCTACACTCCCGCCGTACCTACCACAGTCGCCGTCAACAAGGTCGTCAACGTACCCAAGGTCGTGAGTGTCCCCGAGGTCGTGAAAGTGAACAAGGTCATCAATGAGCCCCAGGTCGTCACCGTCAACAAGGTAGTCAGCCAGCCCAGCTACAACCTGGGATACTCCGGCTACACCGGCGGTCTCGCCGGCTACGGCGCTGGATACGGCACTTACGGATCAGGCCTCAGCACCTACGGAGCTGGCTACACCCCGTACAGCACCGGTTACAGCACTTACGGAGCTGGCTACACCCCGTACAGCACCGGCTACAGCACTTACGGAGCTGGCTACACTCCCTACAGCACCGGTTACAGCACCCACGGATCCGGCTTCGGTCCCTACAGCACTGGCTTCGGCACCGGCTACGGAGCCACCTACGCCAGCGCCTGGAAATGA
Protein
MRSFVLICALVAIAAAAKTEDKAARDKRSFFHGLGYDSNYGSTFGYGSGYQNLGGLGYSGYSSPSVYSSPSSYSYSTPAVSSYGYTSPAVSYANAGYRYASPAYSYAAPAFSAASYAAPVYSAASYAAPAYSAASYAPAVSSYGYSTPQVRYSSAPAVSYSSFTSVPSVKYAAAPAVSYSAAPAVSYSAAPAVSYSAAPAVSYSAAPALSYSAVAPAVKYRAAPAVSYSAAPALSYSAVAPAVKYSAAPAVSYTAPISYTAPAVSYTPAVPTTVAVNKVVNVPKVVSVPEVVKVNKVINEPQVVTVNKVVSQPSYNLGYSGYTGGLAGYGAGYGTYGSGLSTYGAGYTPYSTGYSTYGAGYTPYSTGYSTYGAGYTPYSTGYSTHGSGFGPYSTGFGTGYGATYASAWK

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.998815
 
 
Length:
409
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.52449
Exp number, first 60 AAs:
0.08172
Total prob of N-in:
0.02425
outside
1  -  409
 
 

Population Genetic Test Statistics

Pi
210.626598
Theta
166.103991
Tajima's D
-1.55823
CLR
0.921541
CSRT
0.0534973251337433
Interpretation
Uncertain
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