SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10668
Pre Gene Modal
BGIBMGA008212
Annotation
cuticular_protein_glycine-rich_28_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.203 Nuclear   Reliability : 1.386
 

Sequence

CDS
ATGAGAGCTTTTGTATTAATCTGCACTCTGGTGGCGCTCGCCTCAGCCGGCGATGTCCGTGAGAAGCGCGGCTTCCTCGGCGGATACAGCGGTGGGATCGGATACGGTGGCGGATATGGCGGATACAGTGGTGGATATGGCGGTTACGGTGGTGGACTCGGTGGTATCGGCTACAGCAGCTACTCCGCTCCCGCTGTGGTCTCCGTCAACAAGGTCGTGAACGTCCCCAGAGTTGTCAGTGTACCCCAGGTCGTATCTGTCAACAAGGTAGTCTCCCAACCTCAGGTAGTCACTGTCAATAAAGTTATCTCCAGCGGTATCGGTGGATACAGTGGTGGATACGGAGGATACAGTGGCGGATACGGTGGTGGATACGGAGGCGGATACGGCGGCGGATACGGCGGCGGATACAGCAGTGGATGGTGGTGA
Protein
MRAFVLICTLVALASAGDVREKRGFLGGYSGGIGYGGGYGGYSGGYGGYGGGLGGIGYSSYSAPAVVSVNKVVNVPRVVSVPQVVSVNKVVSQPQVVTVNKVISSGIGGYSGGYGGYSGGYGGGYGGGYGGGYGGGYSSGWW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.999099
 
 
Length:
142
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.41306
Exp number, first 60 AAs:
8.66103
Total prob of N-in:
0.38446
outside
1  -  142
 
 

Population Genetic Test Statistics

Pi
7.847615
Theta
14.7248
Tajima's D
-1.328241
CLR
0.734008
CSRT
0.08029598520074
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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