Gene

KWMTBOMO10658

Pre Gene Modal

BGIBMGA008257

Annotation

PREDICTED:_SLIT-ROBO_Rho_GTPase-activating_protein_3-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr18(-):145276-152435      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.077 Mitochondrial   Reliability : 1.545 Nuclear   Reliability : 1.492

CDS

ATGCGGGAGGGGCGCGGAGGGCGAATCCCGCGCGGAGGCTGCGCGACCTCAGTCGAGCGCCGCCGCTCCGCCATGTTCCACTGCATCGTGCAGCCGCGGCATGACTGGGGACCGCCAGACTTCGCCAATGCCTTCCCCGATATAAAGTCACAACTAGTGGAGCACACTCGCGTGCTAGAGGCTCGCGCGGAGGCGACGGCGGGCGTGGCTGGGGAACTCCACGAGTACTGCCGGAGACGCGCCGACCTGGAACACGAGTACGCGAGGGCACTCGACAAGCTCGCCCGCGCCGCGCACCAGCGACACGAGGGACAGAAACACAAACGCGAGCAATGGGCGATCACGGGCGCGTTCTCGTGCTGGCAGACGGCGCTGGACGCGACGCGCTCGCTGTCCCGGGACCACGCCGCGCTCGCCGACCTGTACGGGGGCCCGCTGGCCGCGCGCCTGCAGCGGGCCGCCGACGACGCGCTCCGCCTGCACAGGAAGTGCCGGGACATCGTGTCTGAGCGGCACGAGGAGGTGTGCGCGGCGCTGGCGGAGGCGTGGGGCGCGGGCAAGGCGCAGACCGCCGCGGCGCACGAGTGGCGCGTCGCCGCACACAAGCTGCGCACCGCACACGCCGCGCGCGCCGCCCTCGCCGCACACTCGCCGCCGCGACACAAGAAGCTCAAGGCGCTCGACAAGGAACTAGACAAGCGTCGCTCGCGGCACAGCGCGGCGCGCGCACACGCGCTGCGGGCCCGCGCCGACTACGTGCTCAGCCTCGAGGCCGCCAACGCCACGCTGCAGCGGTACTTCCTCGACGACATCGCCGACATCATCCTGTGCATGGAGGTGGGGTTCGAGGCGGTGGTGGGGCGCGCCGTGCGCACGCTGGGCGCGGCGGAGGGCGGCGCGGGGCGGGCGCGGGCGGGCGCGGGGGAGGCGCTGTGCGGCGCGGCGGCGGCGCTGGACGCGCTGGCGGACCGGCGCCGCCTGCTGGACGCGCACGTGGCCGCCTTCGCGCTGCCCCGCCCGCTGCCGCACCAGCCGCCGCCGCCGGACAGTTAA

Protein

MREGRGGRIPRGGCATSVERRRSAMFHCIVQPRHDWGPPDFANAFPDIKSQLVEHTRVLEARAEATAGVAGELHEYCRRRADLEHEYARALDKLARAAHQRHEGQKHKREQWAITGAFSCWQTALDATRSLSRDHAALADLYGGPLAARLQRAADDALRLHRKCRDIVSERHEEVCAALAEAWGAGKAQTAAAHEWRVAAHKLRTAHAARAALAAHSPPRHKKLKALDKELDKRRSRHSAARAHALRARADYVLSLEAANATLQRYFLDDIADIILCMEVGFEAVVGRAVRTLGAAEGGAGRARAGAGEALCGAAAALDALADRRRLLDAHVAAFALPRPLPHQPPPPDS

Uniprot

H9JFG0   A0A3S2N953   A0A212F2J5   A0A1B6DVJ2   A0A1B6DN07   Q7Q2Q9   + More
A0A336KVU5   A0A1J1HGH2   A0A182YI20   A0A182NND1   A0A182WYK0   A0A182RXF5   A0A182P8D3   A0A182QKV9   A0A182WCM4   A0A1J1HHD6   A0A336KSW8   A0A182FLQ9   A0A2M4B9E2   A0A182K696   A0A139WNS8   A0A1B0FV14   A0A2M4CU92   A0A0P4WQA1   A0A154NWY6   A0A0C9RYJ4   A0A0C9QI22   K7IRA6   A0A1B6E4U3   E2BUE0   A0A0L7QZU7   A0A1B6DHB9   A0A088A2B7   A0A067RG87   A0A1A9VZE0   A0A232ETF0   A0A2A3EBX1   V9IC58   A0A1B0ESN9   A0A1A9UQ51   A0A1B0A8V4   A0A1A9XMX8   A0A1B0BZ76   A0A0J7L0N9   A0A026W0C0   A0A3L8D5V0   A0A182SWI1   J9KA86   A0A195AT22   E0VFJ7   A0A1J1HL54   A0A182HXJ3   A0A1B6G5P1   A0A1I8MLH9   A0A1Q3FW79   A0A1Q3FW69   D6W740   A0A1I8PXD9   A0A1B6EIP6   B0X4W0   A0A1Y1LKP1   A0A2M4CUZ9   A0A2M4CUW8   A0A2M4A9L8   A0A182MER2   A0A2M4B9J9   A0A2M4B9K6   A0A2M3Z406   A0A2P8XLE4   A0A182GVW6   A0A0P4WHY1   A0A0P4WXW8   A0A0P4WHM4   A0A0M9A465  

Pubmed

19121390    22118469    12364791    25244985    18362917    19820115    + More
20075255    20798317    24845553    28648823    24508170    30249741    20566863    25315136    28004739    29403074    26483478   

EMBL

BABH01034930    RSAL01000519    RVE41466.1    AGBW02010729    OWR47965.1    GEDC01007593    + More
JAS29705.1    GEDC01010249    JAS27049.1    AAAB01008968    EAA13247.4    UFQS01001054    UFQT01001054    SSX08742.1    SSX28654.1    CVRI01000002    CRK86971.1    AXCN02001907    CRK86970.1    UFQS01000969    UFQT01000969    SSX08087.1    SSX28232.1    GGFJ01000533    MBW49674.1    KQ971307    KYB29649.1    AJWK01006530    AJWK01006531    AJWK01006532    AJWK01006533    AJWK01006534    AJWK01006535    GGFL01004736    MBW68914.1    GDRN01050209    JAI66483.1    KQ434775    KZC04072.1    GBYB01014340    JAG84107.1    GBYB01014343    JAG84110.1    GEDC01004357    JAS32941.1    GL450640    EFN80667.1    KQ414673    KOC64135.1    GEDC01012225    JAS25073.1    KK852486    KDR22787.1    NNAY01002280    OXU21638.1    KZ288311    PBC28541.1    JR037675    JR037676    AEY57909.1    AEY57910.1    CCAG010023381    JXJN01023024    LBMM01001415    KMQ96362.1    KK107599    EZA48584.1    QOIP01000012    RLU15857.1    ABLF02039578    KQ976745    KYM75368.1    AAZO01001856    DS235114    EEB12153.1    CRK86969.1    APCN01005314    GECZ01012136    JAS57633.1    GFDL01003196    JAV31849.1    GFDL01003191    JAV31854.1    EFA11413.2    GECZ01031983    JAS37786.1    DS232356    EDS40575.1    GEZM01059008    JAV71577.1    GGFL01004965    MBW69143.1    GGFL01004966    MBW69144.1    GGFK01004172    MBW37493.1    AXCM01003886    GGFJ01000566    MBW49707.1    GGFJ01000565    MBW49706.1    GGFM01002484    MBW23235.1    PYGN01001794    PSN32784.1    JXUM01091911    JXUM01091912    JXUM01091913    JXUM01091914    JXUM01091915    JXUM01091916    KQ563951    KXJ73026.1    GDRN01050211    JAI66481.1    GDRN01050210    JAI66482.1    GDRN01050208    JAI66484.1    KQ435762    KOX75499.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000007062    UP000183832    UP000076408    + More
UP000075884    UP000076407    UP000075900    UP000075885    UP000075886    UP000075920    UP000069272    UP000075881    UP000007266    UP000092461    UP000076502    UP000002358    UP000008237    UP000053825    UP000005203    UP000027135    UP000091820    UP000215335    UP000242457    UP000092444    UP000078200    UP000092445    UP000092443    UP000092460    UP000036403    UP000053097    UP000279307    UP000075901    UP000007819    UP000078540    UP000009046    UP000075840    UP000095301    UP000095300    UP000002320    UP000075883    UP000245037    UP000069940    UP000249989    UP000053105   

PRIDE

H9JFG0   

Pfam

PF00611   FCH        + More
PF00620   RhoGAP
PF00018   SH3_1
PF14604   SH3_9

Interpro

IPR001060   FCH_dom        + More
IPR027267   AH/BAR_dom_sf       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR001452   SH3_domain       
IPR031160   F_BAR       
IPR036028   SH3-like_dom_sf       

SUPFAM

SSF103657   SSF103657        + More
SSF48350   SSF48350       
SSF50044   SSF50044       

Gene 3D

1.20.1270.60     1.10.555.10    

ProteinModelPortal

H9JFG0   A0A3S2N953   A0A212F2J5   A0A1B6DVJ2   A0A1B6DN07   Q7Q2Q9   + More
A0A336KVU5   A0A1J1HGH2   A0A182YI20   A0A182NND1   A0A182WYK0   A0A182RXF5   A0A182P8D3   A0A182QKV9   A0A182WCM4   A0A1J1HHD6   A0A336KSW8   A0A182FLQ9   A0A2M4B9E2   A0A182K696   A0A139WNS8   A0A1B0FV14   A0A2M4CU92   A0A0P4WQA1   A0A154NWY6   A0A0C9RYJ4   A0A0C9QI22   K7IRA6   A0A1B6E4U3   E2BUE0   A0A0L7QZU7   A0A1B6DHB9   A0A088A2B7   A0A067RG87   A0A1A9VZE0   A0A232ETF0   A0A2A3EBX1   V9IC58   A0A1B0ESN9   A0A1A9UQ51   A0A1B0A8V4   A0A1A9XMX8   A0A1B0BZ76   A0A0J7L0N9   A0A026W0C0   A0A3L8D5V0   A0A182SWI1   J9KA86   A0A195AT22   E0VFJ7   A0A1J1HL54   A0A182HXJ3   A0A1B6G5P1   A0A1I8MLH9   A0A1Q3FW79   A0A1Q3FW69   D6W740   A0A1I8PXD9   A0A1B6EIP6   B0X4W0   A0A1Y1LKP1   A0A2M4CUZ9   A0A2M4CUW8   A0A2M4A9L8   A0A182MER2   A0A2M4B9J9   A0A2M4B9K6   A0A2M3Z406   A0A2P8XLE4   A0A182GVW6   A0A0P4WHY1   A0A0P4WXW8   A0A0P4WHM4   A0A0M9A465  

PDB

5I6R     E-value=5.15923e-09,     Score=145

KEGG

101737682    K07526 SLIT-ROBO Rho GTPase activating protein | (RefSeq) SLIT-ROBO Rho GTPase-activating protein 3-

GO

GO:0005096   GO:0007165   GO:0005737   GO:0048365   GO:0030336  

Length:

350

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00497

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01383

outside

1  -  350

 

 

Pi

171.784852

Theta

146.299924

Tajima's D

0.5838

CLR

0.086606

CSRT

0.543022848857557

Interpretation

Uncertain