Silkworm Genome Informatics Database

Gene

KWMTBOMO10657

Pre Gene Modal

BGIBMGA008258

Annotation

PREDICTED:_SLIT-ROBO_Rho_GTPase-activating_protein_3-like?_partial_[Bombyx_mori]

Location

Bomo_Chr18(-):136065-142785 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.148

CDS

ATGCGCGAGGTGATAGGGGACGCGGCGCCCGAGCAGGACGAGCACACCGCGCGCGTCACCGCCGAGCTGGAGCAGCGCCTCCTGCAGCTCGACGCTGCCGCGCGGCAGCTGCGGGCGGAGTGCCGCGAGAACGCCAAGACGCTCGACGCCGCCGAGGCAGAGCTCATCAAGCAGATGGAGGGCAGCGACGCGCACTGGGACGTCAGCAACCTGTTCGGCCCCGGAGCTACACCCCTGGCCACTGCCGCCGCCGCCGACGATAACGACGCGCCGCGACGAGACCAAGAGGACTATTACTTAGCGAAGTTCCGGGCCTACGTGTCGTGCGCCGGCCGCCTGGCGCGCCTGGAGTGCAAGGCGGGGGTGGCCCGCGCGCGCCTGGGGGCCGGGGGGGGCGCGGCGGGGGCGCCCGGCACGCCGCCCTCCCCGCCGCGCCGCGCCGCCGCCCGCCTGCGCCGCGGACAGTTCGCGGCGCCGCTGGAGCACCGGCTGCCCGTGGTGCTGACGTCGTGCGTGCGCGTGATCGCGTCGTACGGGCTGCGGCACCAGGGCGCGTTCCGCGTGTCGGGCTCGCAGGTGGAGATGCAGGCGCTGCGGGCCGCCTTCGAGCGCGGCGAGGACCCGCTGGCGGACGTGCGCGACGCGACCGACATCAACTCGGTGTGCGGGCTGCTCAAGCTGTACCTGCGCGAGCTGCGGCCGCCGCTGCTGCCCCCGCAGCTGCAGGAGCGGCTGGTGCGCGTGGCGGCCGTGCCCGACGACGCCGAGTTCGTGCGGCGCCTGCGCGACACGCTGGCCGTGCTGCCGCGCCCCGCGCTGCTGGTGCTGCGCTACCTGTTCGCCTTCCTGGCGCACCTGGCCGAGCACAGCGACCACAACATGATGGACGCCTGGAACCTCGCCATCTGCGTGGGGCCCACGCTGCTGGCCGCCGCGCCGGCCGACGGCGGCCAGCAGGTCACGGCGCAGAACCTGGTCAACGAGCTGGTGAAGCGCACCATCATCCACCACCTGGACGTATTCCCGCAGGACATCGCGCCCTACGCCCTGTACAGCAGATTCCCAGATGCGAGCGGCGAGGACGACAATAAAGAGAAAGAGGAGGGCGAGGAGTACGACGAGGAGGAGGGCGCGGAGTGTGCCCCGGACGTGACGTCACTGGACGAGCACGACGCGCCGGACGACCTGTCGCTCTACAACGACGAAGACGGACTCATCCCTACAATGACTGTTCCAGACGAAGCGAGCGACGAGTGCGAGAACGGCGACTGGAGCGAGCGCGACTCTGCGGAGTTCCAGAGTCGTCTAGCGGAGAGCACCCCGGACCTAGTGTTGGACCTCCCGTCCCGTGCGGCCCCCACCGCGCCCCCCGCGCCCCCCGCGCTGCTCCCAGTCGAGCCCCCGTCGGTGCCCCCCGCCGCGGCCCCCGCGGTGACGCCCGGCGCTGACCCCGCAGATACCTTCGTGCACAACAGGGATACACTCAAGAAACGTCCTCAACACAAACAGTCCAAGTCGGAGGGCGGCACGGAGGAGCCGGCGGGGGGCAGCCCGGTGCCGGCGCGGAACACGGCTCGCGTGGCGGCCAAGTTCGCCGACCTCACCCTCACCGGCGGCTCCCTCAAGCCCGCGCTGGCCGCCAAGCCCGCCCTGCTGCGCCGCCCGCCCGCCGCCGCCTCCGCGCCCGCCCCCGCGCCCGCCCCCGCGCCCGCCGCCGCGCCCGCGCCCGCGCCGCACTGA

Protein

MREVIGDAAPEQDEHTARVTAELEQRLLQLDAAARQLRAECRENAKTLDAAEAELIKQMEGSDAHWDVSNLFGPGATPLATAAAADDNDAPRRDQEDYYLAKFRAYVSCAGRLARLECKAGVARARLGAGGGAAGAPGTPPSPPRRAAARLRRGQFAAPLEHRLPVVLTSCVRVIASYGLRHQGAFRVSGSQVEMQALRAAFERGEDPLADVRDATDINSVCGLLKLYLRELRPPLLPPQLQERLVRVAAVPDDAEFVRRLRDTLAVLPRPALLVLRYLFAFLAHLAEHSDHNMMDAWNLAICVGPTLLAAAPADGGQQVTAQNLVNELVKRTIIHHLDVFPQDIAPYALYSRFPDASGEDDNKEKEEGEEYDEEEGAECAPDVTSLDEHDAPDDLSLYNDEDGLIPTMTVPDEASDECENGDWSERDSAEFQSRLAESTPDLVLDLPSRAAPTAPPAPPALLPVEPPSVPPAAAPAVTPGADPADTFVHNRDTLKKRPQHKQSKSEGGTEEPAGGSPVPARNTARVAAKFADLTLTGGSLKPALAAKPALLRRPPAAASAPAPAPAPAPAAAPAPAPH

Uniprot

NA

ProteinModelPortal

NA

PDB

3CXL E-value=2.17567e-08, Score=142

KEGG

101745749 K07526 SLIT-ROBO Rho GTPase activating protein | (RefSeq) SLIT-ROBO Rho GTPase-activating protein 3-

GO

GO:0007165 GO:0046872 GO:0003676 GO:0020037 GO:0006457 GO:0003906 GO:0005634 GO:0006285 GO:0019104 GO:0003824

Length:

579

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15167

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00434

outside

1 - 579

Pi

319.80607

Theta

232.11415

Tajima's D

1.142242

CLR

0.32764

CSRT

0.700514974251287

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics