Silkworm Genome Informatics Database

Gene

KWMTBOMO10651

Pre Gene Modal

BGIBMGA014427

Annotation

serine_protease_precursor_[Bombyx_mori]

Location

Bomo_Chr18(-):81595-92625 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.772

CDS

ATGGCACTGGCTAGGAGTGCCTTTTTTATGGGGGGCTTCGACGGCGATACCGGAGAGCCTGCAGACGGTCTGGTGAATCCATCCGTCGATGAGGCGGGGGCGAGGTCGACCTCCATATCCGAGTCAGAGTCGGAACACGAGGAGGCGGACGCAGGCGACCTACGAGCAAGTATAGGTGTTTTAGAGGGTGCGTTGGAGGCCGCGGATGATCGCTCAGCTGAAACGGTGGCCACGGCGGACGACGCAGCAGTTTTACTCGCCAGTATAGGCGACATGGGAGCTGCAGGCACGACGGAGGCTGCGGTGCTCGATGCAGAAGCTTTGCACGCAGTTTCTCGCAGTTTATTACACTGTGATCCTAGGATGAGAGGTTTTAATGTATTGGCGCTGCTTGCGCTGGCGACTGCTGCCCATGCCTTCGTACCCATAGAGACCAACTACCATGAGGTGATCGGGATCCCTATGGCGATGGAGCTCAAGAGCGCTGAGGAGGGCGCTGACTTCGACGGCGCCAGGATCGTAGGAGGCAGTGTGGCGGGGCTAGGCACTCATCCACATCTTGCCGCTATGGTGATTACTCTGACCGACGGTCGCACCTCCATGTGCGGAGCCTCCCTGCTGAGCCACACTCGCTCCGTGACCGCGGCTCACTGCTGGAGGACCAGGAGCGCTCAAGGACGCACGCTTCAATTGGGTTTCGGCACCACTCAGTTCTTCACTGGTGGATTCAGAATTAACACTAACAATGTTCAAATGCACGGCAGCTACAACATGGACAATCTTCACAACGACGTGGCTATGATTATCCACGGACGGGTCGGATACACAAATGTGATCCAGCCGATCTTCCTGCCCCCCTCACATCTCCTCAACAACCAATTCGTGGGTACCTGGGCCTGGGCTGCTGGTTATGGAAGAACCAGCGACGCAAGTGGTAGTAACACCCGGAAGCATCAAGTGGCTCTTCAAGTGATCACCAATGCAGACTGCGCGCGTACTTTCGGTAACGGTGTCATCGCGTCGACCCTCTGCGTGAACACCCAGGGGGGGCGCAGCACCTGCCGCGGAGACTCCGGTGGACCCCTCGCTTTCACGTATGGAGGACGTCGCACCCTGATCGGGATCACCTCGTTTGGCGCTGCTCAATGTCAGCGGGGACATCCGGCTGGTTTCGCCAGGGTCACCTCGTTCGCTTCTTGGATACGTGCTAGACTCTAG

Protein

MALARSAFFMGGFDGDTGEPADGLVNPSVDEAGARSTSISESESEHEEADAGDLRASIGVLEGALEAADDRSAETVATADDAAVLLASIGDMGAAGTTEAAVLDAEALHAVSRSLLHCDPRMRGFNVLALLALATAAHAFVPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRTLQLGFGTTQFFTGGFRINTNNVQMHGSYNMDNLHNDVAMIIHGRVGYTNVIQPIFLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCARTFGNGVIASTLCVNTQGGRSTCRGDSGGPLAFTYGGRRTLIGITSFGAAQCQRGHPAGFARVTSFASWIRARL

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JY09 A0A1E1WB13 A0A1E1W2N0

Pubmed

19121390

EMBL

BABH01041868 GDQN01006881 JAT84173.1 GDQN01009850 JAT81204.1

Proteomes

UP000005204

PRIDE

H9JY09

Pfam

PF00089 Trypsin

Interpro

IPR018114   TRYPSIN_HIS        + More
IPR009003   Peptidase_S1_PA
IPR001314   Peptidase_S1A
IPR001254   Trypsin_dom
IPR033116   TRYPSIN_SER

SUPFAM

SSF50494 SSF50494

CDD

cd00190 Tryp_SPc

ProteinModelPortal

H9JY09 A0A1E1WB13 A0A1E1W2N0

PDB

2HLC E-value=8.18601e-32, Score=342

KEGG

101740414 no KO assigned | (RefSeq) collagenase-like

GO

GO:0004252 GO:0006508 GO:0003676 GO:0020037 GO:0006457 GO:0003906 GO:0005634 GO:0006285 GO:0019104 GO:0003824

Length:

405

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.90026

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08425

outside

1 - 405

Pi

232.736687

Theta

2.411879

Tajima's D

0

CLR

0.375026

CSRT

0.403329833508325

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree