Gene

KWMTBOMO10645  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014428

Annotation

PREDICTED:_collagenase-like_[Bombyx_mori]

Location

Bomo_Chr18(-):16921-18675      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.498

CDS

ATGACTGACAACATTCTACTCGAGGGAACCTGTAAACTGGTAGTAGCCATGAAGGTCTTCGCAGCAGTACTGATGGCGTTGGCGGCCGTGGTCGTGGCAGAAGAGGCCATCGAACTTGACTACCACAACAAGATCGGTATCCCCCGGGCCGAGAGTCTTAGACGCGCCGAGGAAGCCGCTGACTTCGACGGTACCAGGATTGTGGGTGGTTCTGCCGCCAACGCTGGTGCTCACCCCCATCTTGCTGGACTTGTGATCGCACTGACGAATGGCAGAACTTCCATCTGCGGAGCTTCCTTACTGACCAACACCCGCTCCGTGACCGCCGCTCATTGCTGGAGGACCAGGAGAGCCCAGGCTCGTCAGTTCACCCTCGCTCTTGGCACAGCTAACATCTTCTCCGGAGGCACCAGGGTCACCACCTCCAATGTCCAGATGCACGGCAGCTACAACATGGACACCCTCCACAACGACGTCGCCATCATCAACCACAACCATGTTGGCTTCACCAACAACATCCAGCGCATCAACCTAGCCAGTGGAAGCAACAACTTTGCTGGTACTTGGGCCTGGGCTGCCGGCTTCGGAAGGACCTCCGATGCTGCTTCGGGAGCCAACAACCAACAAAAACGCCAAGTGAGCCTCCAGGTCATTACCAACGCCGTCTGCGCCCGCACGTTTGGAAACAATGTGATCATTGCCTCCACCCTCTGTGTTGACGGCTCTAACGGTCGCAGCACCTGCAGCGGAGACTCCGGCGGCCCTCTCACCATCGGCAGCGGCGGAAGCCGTCAACTGATCGGTATCACATCGTTCGGATCAGCTCAAGGTTGCCAGAGAGGCCACCCTGCCGGCTTCGCCAGAGTCACATCCTTCAACTCCTGGATCCGGGCTAGAATTTAA

Protein

MTDNILLEGTCKLVVAMKVFAAVLMALAAVVVAEEAIELDYHNKIGIPRAESLRRAEEAADFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSNNFAGTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIRARI

Similarity

Belongs to the peptidase S1 family.
Belongs to the ETS family.

Uniprot

H9JY10   O01953   Q762I9   Q58I80   H9JY12   Q58I79   + More
H9JY11   H9JY13   A0A194Q3W8   A0A194Q399   H9JY09   T1WJA5   A0A194Q0R8   A0A0N1PGY7   A0A2W1BAG4   A0A0N0PCX7   A0A0N0PAA7   A0A0N0PA14   A0A089QFN1   C9W8H4   A0A0N0PAA9   A0A194R2V7   A0A0N1IAY5   A0A2A4JJ77   A0A3S2LL18   A0A0N1IFV7   A0A2H1WCW9   A0A0N1PIX2   A0A0M4LSN9   A0A212EYA6   Q56IC0   A0A0M3T9F4   I6TRU6   A0A0N1I5V5   I6SW50   B2ZJV9   A0A0N1ICZ9   A0A0N0PEU9   H9JCY0   A0A1E1WV21   A0A194QCZ1   Q9NH07   A0A1B0RHP3   C9W8F9   O18450   A0A0N1PHR5   O18445   A0A2A4K228   A0A194QK37   A0A2A4K0D3   A0PGD6   A0A194PUF7   B4X987   O18444   B4X988   Q9N6C6   A0A142I706   A0A2A4K1C2   A0A194QF72   H9JJ25   A0A2A4K1Q8   E7D008   A0PGD7   B6D1R1   C9W8H8   J7FDV3   B4X990   C9W8G8   A0A089RSZ3   A0A2A4JSJ6   E7D003   E7D013   B4X989   C7FF06   A0A0L7L962   A0A2H1V6V4   D7RZZ7   A0A2A4J8H7   S5QJ14   A0A2A4J6X3   O18443   D7RZZ8   D7RZZ6   B6CMF0   E2D741   Q86M89   D7RZZ9   D2Y4U4   A0A2H1V6R8   I6TEX2   E7D007   A9P3S5   A0PGE0   J7FCZ4   C9W8G7   A0A1E1W2N0   A0A2A4JFK9   C9W8G0   Q25503  

Pubmed

19121390    10380113    15033574    26354079    28756777    20824821    + More
22118469    16469064    11267902    9404008    20696895    19133073    22228503    20149796    21322004    26227816    23606528    18760362    19194984    19146482   

EMBL

BABH01041852    BABH01042790    AB003670    BAA20136.1    AB117641    BAD13342.1    + More
AY945210    EU338400    AAX39408.1    ABY58153.1    BABH01041859    BABH01041860    AY945211    DQ310733    AAX39409.1    ABC26003.1    BABH01041853    BABH01041861    KQ459472    KPJ00237.1    KQ459586    KPI97880.1    BABH01041868    KF039687    AGU27161.1    KQ459581    KPI99177.1    KQ461033    KPJ09997.1    KZ150191    PZC72392.1    KQ460401    KPJ14971.1    KQ458725    KPJ05397.1    KQ458978    KPJ04519.1    KM083780    AIR09761.1    FJ205420    ACR15987.3    KPJ05400.1    KQ460845    KPJ12032.1    KPJ05401.1    NWSH01001385    PCG71452.1    RSAL01000073    RVE48982.1    KQ460140    KPJ17495.1    ODYU01007826    SOQ50918.1    KPJ17496.1    KR024679    ALE15221.1    AGBW02011570    OWR46476.1    AY953056    AY953057    AAX62029.1    AAX62030.1    KR024680    ALE15222.1    JQ904141    AFM77771.1    KPJ05396.1    JQ904140    AFM77770.1    EU672968    ACD44927.1    KQ459388    KPJ01122.1    KQ459620    KPJ20544.1    BABH01027594    GDQN01000181    JAT90873.1    KQ459185    KPJ03332.1    AF233732    AAF71519.1    KM360186    AKH49602.1    FJ205404    ACR15972.2    Y12287    CAA72966.1    KPJ17494.1    Y12281    CAA72960.1    NWSH01000291    PCG77692.1    KQ461198    KPJ05938.1    PCG77697.1    AY618891    AAV33654.1    KQ459591    KPI97041.1    EF531623    ABR88234.1    PCG77696.1    Y12280    CAA72959.1    EF531624    ABR88235.1    AF233731    AF233734    AAF71518.1    AAF71716.1    KT907053    AMR44225.1    PCG77694.1    KQ459252    KPJ02116.1    BABH01023267    PCG77693.1    HM990178    ADT80826.1    AY618892    AAV33655.1    EU673454    ACI45417.1    FJ205424    ACR15991.1    JN252035    AFM28248.1    EF531626    ABR88237.1    FJ205413    ACR15981.1    KM083791    ODYU01000971    AIR09772.1    SOQ36530.1    NWSH01000651    PCG75015.1    HM990173    ADT80821.1    HM990183    ADT80831.1    EF531625    ABR88236.1    GQ354838    ACU00133.1    JTDY01002254    KOB71786.1    SOQ36529.1    HM209420    ADI32881.1    NWSH01002619    PCG67834.1    KC175563    AGR92346.1    PCG67835.1    Y12279    CAA72958.1    HM209421    ADI32882.1    HM209419    ADI32880.1    EU325550    ACB54940.1    GQ891130    ADK27715.1    AY251276    AAO75039.1    HM209422    ADI32883.1    GU323796    ADA83701.1    SOQ36528.1    JQ904139    AFM77769.1    HM990177    ADT80825.1    EF104914    ABP96916.1    AY618895    AAV33658.1    JN252036    AFM28249.1    FJ205412    ACR15980.1    GDQN01009850    JAT81204.1    NWSH01001552    PCG70875.1    FJ205405    ACR15973.2    L34168    AAA58743.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000283053    UP000007151    + More
UP000037510   

PRIDE

H9JY10    O01953    Q762I9    H9JY12    Q58I79    H9JY11    + More
H9JY13    H9JY09    H9JCY0    H9JJ25   

Pfam

PF00089   Trypsin        + More
PF00178   Ets

Interpro

IPR009003   Peptidase_S1_PA        + More
IPR001314   Peptidase_S1A       
IPR001254   Trypsin_dom       
IPR033116   TRYPSIN_SER       
IPR018114   TRYPSIN_HIS       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR000418   Ets_dom       

SUPFAM

SSF50494   SSF50494        + More
SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9JY10   O01953   Q762I9   Q58I80   H9JY12   Q58I79   + More
H9JY11   H9JY13   A0A194Q3W8   A0A194Q399   H9JY09   T1WJA5   A0A194Q0R8   A0A0N1PGY7   A0A2W1BAG4   A0A0N0PCX7   A0A0N0PAA7   A0A0N0PA14   A0A089QFN1   C9W8H4   A0A0N0PAA9   A0A194R2V7   A0A0N1IAY5   A0A2A4JJ77   A0A3S2LL18   A0A0N1IFV7   A0A2H1WCW9   A0A0N1PIX2   A0A0M4LSN9   A0A212EYA6   Q56IC0   A0A0M3T9F4   I6TRU6   A0A0N1I5V5   I6SW50   B2ZJV9   A0A0N1ICZ9   A0A0N0PEU9   H9JCY0   A0A1E1WV21   A0A194QCZ1   Q9NH07   A0A1B0RHP3   C9W8F9   O18450   A0A0N1PHR5   O18445   A0A2A4K228   A0A194QK37   A0A2A4K0D3   A0PGD6   A0A194PUF7   B4X987   O18444   B4X988   Q9N6C6   A0A142I706   A0A2A4K1C2   A0A194QF72   H9JJ25   A0A2A4K1Q8   E7D008   A0PGD7   B6D1R1   C9W8H8   J7FDV3   B4X990   C9W8G8   A0A089RSZ3   A0A2A4JSJ6   E7D003   E7D013   B4X989   C7FF06   A0A0L7L962   A0A2H1V6V4   D7RZZ7   A0A2A4J8H7   S5QJ14   A0A2A4J6X3   O18443   D7RZZ8   D7RZZ6   B6CMF0   E2D741   Q86M89   D7RZZ9   D2Y4U4   A0A2H1V6R8   I6TEX2   E7D007   A9P3S5   A0PGE0   J7FCZ4   C9W8G7   A0A1E1W2N0   A0A2A4JFK9   C9W8G0   Q25503  

PDB

2HLC     E-value=1.68379e-32,     Score=347

KEGG

101740143    no KO assigned | (RefSeq) collagenase-like

GO

GO:0004252   GO:0003700   GO:0043565   GO:0005634   GO:0006508   GO:0016021   GO:0020037   GO:0006457   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

Subcellular location

Nucleus  

Length:

300

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.01595

Exp number, first 60 AAs:

19.83462

Total prob of N-in:

0.90386

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  32

outside

33  -  300

 

 

Pi

259.715807

Theta

202.098522

Tajima's D

2.35709

CLR

53.8582

CSRT

0.927553622318884

Interpretation

Uncertain