Silkworm Genome Informatics Database

Gene

KWMTBOMO10640 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003962

Annotation

hypothetical_protein_KGM_04993_[Danaus_plexippus]

Location

Bomo_Chr17(+):16729626-16732932 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.647

CDS

ATGGGTCGTAAAATACCTGCCAAAAAACATCGAGGAGTGAAAGATCCCTTAGTGCAACAGGCCCGGCGGGAACAAAGCTTAAAATCTAAAATTAACGCACCACCGAAAGATCCTGATGACCAGCCCGTGCCACGATCTCTAACTAGGCTTTTTTCTTTTCAAGAAAACCGTGAAGTTGGAAAACGAAACAAGAAAAATAAAGTCAAGAGACTCGATCAAAATGCAGAACACAGGAGTAGAAACAAAAGTTCAGTTGGACGCAACCCCATAACATGTATGAAGAAGTTACCAGGAGAGAGTGGACGGGACTTCTCACTGAGGATCAACAGTGCATTGAAAGCTTTACACAACCCAGTTGAAAATCTAGACTATCCTGAAGACATAGATACAGAAGATACAAAAGGGGAGAGGATGGCGGCACAGAGGGAACGCAGGGCACGTAAACGTAAAAAGGCAAAGAAAGGGCAAGAAGACTCGGAACCACAACTAAACCGGAACCAAAGGCTAGCACAGAAGAAAAAAGAAAAAAAGATGAAAGCATTAGATGCGGCGAGCGAGAAGTGCGAGGTGGTGTACGAGCACGTGCCGTTCGGCGAGCTCGCCCACGCGCCGCCCGCGCTGCGCCGCCACGGGAGGCTCGGCCCCGCACCCAATAGAGTATGCCGGCTGTACACTGGTTGTTTCCAGGCGGGCGGGCGCGCGCTGCTGCTGAGCGGGCTGCTGGCGGGCGCTGCGCGGCGCGAGGCCGTGGCCGCCTACAGGACGCTGAAGGCCTCCAGGCCCAGGGACAATAAACTAGTGCTCTGA

Protein

MGRKIPAKKHRGVKDPLVQQARREQSLKSKINAPPKDPDDQPVPRSLTRLFSFQENREVGKRNKKNKVKRLDQNAEHRSRNKSSVGRNPITCMKKLPGESGRDFSLRINSALKALHNPVENLDYPEDIDTEDTKGERMAAQRERRARKRKKAKKGQEDSEPQLNRNQRLAQKKKEKKMKALDAASEKCEVVYEHVPFGELAHAPPALRRHGRLGPAPNRVCRLYTGCFQAGGRALLLSGLLAGAARREAVAAYRTLKASRPRDNKLVL

Uniprot

H9J375 A0A212F967 S4P5Q5 A0A194R924 A0A3S2NTH7 A0A194QE09 + More
A0A1Y1M9F0 N6U885 J3JTV5 U4U818 A0A232EUH6 A0A2J7RSJ6 A0A067RMP0 A0A0T6AX14 E2AAE8 A0A182V0C4 A0A182KMC7 A0A182X2S9 A0A182U6K8 Q7PY80 A0A182HGU7 A0A182N4D0 A0A182QG92

Pubmed

19121390 22118469 23622113 26354079 28004739 23537049 + More
22516182 28648823 24845553 20798317 20966253 12364791 14747013 17210077

EMBL

BABH01036720 AGBW02009651 OWR50249.1 GAIX01007206 JAA85354.1 KQ460779 + More
KPJ12371.1 RSAL01000214 RVE44147.1 KQ459144 KPJ03659.1 GEZM01036944 JAV82324.1 APGK01035626 KB740928 ENN77880.1 BT126664 AEE61627.1 KB632064 ERL88473.1 NNAY01002130 OXU21991.1 NEVH01000254 PNF43811.1 KK852421 KDR24303.1 LJIG01022605 KRT79674.1 GL438104 EFN69595.1 AAAB01008987 EAA01178.5 APCN01005946 AXCN02000034

Proteomes

UP000005204 UP000007151 UP000053240 UP000283053 UP000053268 UP000019118 + More
UP000030742 UP000215335 UP000235965 UP000027135 UP000000311 UP000075903 UP000075882 UP000076407 UP000075902 UP000007062 UP000075840 UP000075884 UP000075886

PRIDE

H9J375

Interpro

IPR026680 CCDC137

ProteinModelPortal

H9J375 A0A212F967 S4P5Q5 A0A194R924 A0A3S2NTH7 A0A194QE09 + More
A0A1Y1M9F0 N6U885 J3JTV5 U4U818 A0A232EUH6 A0A2J7RSJ6 A0A067RMP0 A0A0T6AX14 E2AAE8 A0A182V0C4 A0A182KMC7 A0A182X2S9 A0A182U6K8 Q7PY80 A0A182HGU7 A0A182N4D0 A0A182QG92

KEGG

101746288 no KO assigned | (RefSeq) UPF0653 protein C607.02c

GO

PANTHER

PTHR21838

Length:

268

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1991

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13052

outside

1 - 268

Pi

130.890626

Theta

162.911893

Tajima's D

-0.917606

CLR

180.503376

CSRT

0.153992300384981

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics