Silkworm Genome Informatics Database

Gene

KWMTBOMO10637

Pre Gene Modal

BGIBMGA003932

Annotation

PREDICTED:_uncharacterized_protein_LOC101746142_[Bombyx_mori]

Location

Bomo_Chr17(-):16691402-16693155 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.184 Nuclear Reliability : 1.008

CDS

ATGGCGCACTCCCCACTGGACGAGATCGAAGAGCTGACGCTGTGTCCGTGCTGCCGGCGCCCCTTCGACGAGGACGAACACGCACCCAAGCTCCTCGCGTGTCGACACCATTTCTGTTTGCGATGCGCCCGAACCGTGCTGGGCCCGGGCCGAGAAATCTACTGCGCGCACTGCTGGAAGCGCACATCGCCCCCTGGCGGACAGGTCGAGGCACTCCCCACGCACGCCGCCCTGCTGGCACTCACGCGCCACTTCGCCCCCGACCCCGCCTGTACGGAGCACGCGCAGCCCGCGCTGTGGTGTCTGTCGTGCGGCGTGCGGGCCTGTCGCGCCTGTCCTGACCATTCCACCCACACGCTGCGGTCGCCTGGTGAAGCCCGCGCCGTGCTGCGGGCCGAGAGCAAAGAGTTGCGCGCTGACCTGCAGCGTCTCGCGGTGAGACAGCGGGACTTACTGCTGCGCGCACTCGATGCCACCACTGCGCTTAAGCTGCGCCTCGAGAACCAGCTGGCGGCACCGCCCCTTGATCATTACCCGGCGGCCGAGGCGTGTTCTCTGCGGGCCTGTGCGGCAGAGCGGGATGTGCTTAAGGTCCGACATGCGGAAGCACTCGTGCAGGCTAGAGTCGATGACCTCATCCGATCAGCGCCGGCACCGCTTGACTTCGATAGCTTGACGCGAGCCTTGAGAATCACGGAGACGTGGGCGGCATCACCGGCGCCGGGGCCCGGGGATCCGCTTGTTCTACTCGCCAACTACTGTGCGGCACAGGTGTGGGCGCGCACAACACATGGTCGCGTCGAGGACGGAGGATGCGAAACAGCCACAGTGGAGAAGGGAGGGCAAGGAAGAGAAACGCCAGCGGTTCGCGCTCCAACGCCGTTTCCGTTATTCTACTTCGAGCTGGAGGTGGACGGATCGCCCTTCGGACGCATCGTGATCGAGGTGCGCGAGGACGTAGCCCCTCGAATGGCACGTAACTTCGCGGCGCTGACGACCCGCGAACCAGGATCTGGATACCGCGGCTGTGCAGTGTTCCAGTGCTGGGAGAACGAGAGCGTGATCACGGGGGACTTTGAGCATAACAATGGCCGCGGCGGGCGCAGCGCTTTCGAGGAGACCTACTTCATGCCCGACGAGACGCGGTTAGCGGCGGTGCGCGGTTCGGTCGGTATGCGTCGCTCACAGAAGCGCCACGACAACCAGGGTCTAGTGGGGTCACAGTTCCGTATAGTATTGCGCGAGATGCGCGGTTTCACTGCTATCTTCGCGGCGGTCGTGGAGGGGCTAGAGCTGGTGGATCGACTGAGTCGCACGGGAGACAGCGCCGGCAAGCCGAGCTCCACGATCCTGATTTCCGCATGCGGCAAGCTCAACTGA

Protein

MAHSPLDEIEELTLCPCCRRPFDEDEHAPKLLACRHHFCLRCARTVLGPGREIYCAHCWKRTSPPGGQVEALPTHAALLALTRHFAPDPACTEHAQPALWCLSCGVRACRACPDHSTHTLRSPGEARAVLRAESKELRADLQRLAVRQRDLLLRALDATTALKLRLENQLAAPPLDHYPAAEACSLRACAAERDVLKVRHAEALVQARVDDLIRSAPAPLDFDSLTRALRITETWAASPAPGPGDPLVLLANYCAAQVWARTTHGRVEDGGCETATVEKGGQGRETPAVRAPTPFPLFYFELEVDGSPFGRIVIEVREDVAPRMARNFAALTTREPGSGYRGCAVFQCWENESVITGDFEHNNGRGGRSAFEETYFMPDETRLAAVRGSVGMRRSQKRHDNQGLVGSQFRIVLREMRGFTAIFAAVVEGLELVDRLSRTGDSAGKPSSTILISACGKLN

Uniprot

H9J345 A0A2R7VZN2 E0VEH9

Pubmed

19121390 20566863

EMBL

BABH01036715 KK854162 PTY12381.1 AAZO01001553 DS235091 EEB11785.1 + More

Proteomes

UP000005204 UP000009046

PRIDE

H9J345

Pfam

PF00160 Pro_isomerase + More
PF00643 zf-B_box

Interpro

IPR029000   Cyclophilin-like_dom_sf        + More
IPR013083   Znf_RING/FYVE/PHD
IPR001841   Znf_RING
IPR002130   Cyclophilin-type_PPIase_dom
IPR017907   Znf_RING_CS
IPR000315   Znf_B-box

SUPFAM

SSF50891 SSF50891

Gene 3D

2.40.100.10 3.30.40.10

CDD

cd00021 BBOX

ProteinModelPortal

H9J345 A0A2R7VZN2 E0VEH9

PDB

4TOT E-value=3.39235e-20, Score=243

KEGG

101746142 no KO assigned | (RefSeq) uncharacterized LOC101746142

GO

GO:0003755 GO:0008270 GO:0005515 GO:0000413 GO:0006457 GO:0003906 GO:0005634 GO:0006285 GO:0019104 GO:0003824

Length:

459

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02152

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00114

outside

1 - 459

Pi

209.854449

Theta

207.584017

Tajima's D

0.024633

CLR

0

CSRT

0.375531223438828

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics