Gene

KWMTBOMO10636  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003961

Annotation

PREDICTED:_nuclear_protein_localization_protein_4_homolog_[Bombyx_mori]

Location

Bomo_Chr17(+):16683226-16690166      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.416

CDS

ATGCTATTGCGAGTTCAGTCACCCGAAGGTACAGCGCGAGTGGAGGTGCTGGACTCCGATGTGACGGCGCATCTATTCGAGCGAATATACGAAGCTCTGAATCTGAACTCTTTCGCATTCACTCTGCACAAGGACAGACAGCGCAAGGAAGAAATCACATCCAGCAAATCGAGACAGCTGCGAGATTGTGGACTGTGTCATGGCGACATGATATACTTGAATCCAGTCAATGGTGCTGTACTCTTTGAACAGTCTTCCACAAGCTCAGAGACCCACCGGAAACCCCTCAGTGAAAGTTCCAGACCAGTTCAGTCATCAGAGCCAGGTCCTTCCACGTCTAAAGTCACATTACCAATACCCCCCCCACCTCCTGGTGCTCCAGAGGAAGATGAAGTAGATTTGCAATTGTACAAAGTTTCTGGTTTAATTGAAAGACAGAGGGATGAAAAATTATGTCGACATAATCTTAATGGCAAATGCGTTCACTGTACCCCGTTAGAACCTTGGGACGAAGAATACTTAAAGGAACATAACATTAAACACATGTCATTCCACTCATACTTACGGAAGATTACATCTAAGAACTTTGTGTCACTTGAAGAACTTTCCTGCAAAATCAAACCAGGTTGCAGGGAACACCCGGCCTGGCCTCGTGGGATCTGCTCCAAGTGCCAGCCTGGAGCAGTGACGCTGATGCGACAACCTTACAGACATACTGACAACGTACTGTTTGAACACGCCAACCTGGTGGAGCGCTTCCTGTCCTACTGGCGCGCCACCGGCCACCAGCGCCTGGCCTGGCTCTACGGCCAGTACGAGAGCCACCCCGACGTGCCGCTGGGTATCCGTGCCCGCGTGGCCGCCATATACGAGCCGCCCCAGTCGTCGTCCCGCGACTGCATAGCGCTGGAGACGGACCCCCGCGAGGAACTGGTCCAGCAGATCGCCCAGCGCCTCGGGCTGCGGAGGGTGGGGTGGATCTTCACCGATCTAGTGCCGCTAGATGTATCCAAAGGAACCGTTAAACACATTCGGGGGGTGGACACGCACTTCCTGTCGGCGCAGGAGTGCATCACGGCGGGGCACTACCAGAACCTGCACCCCAGCGCGTGCCGCCACGCCGCCTCCGGCTACTTCGGCTCCAAGTTCGTGACGGTGTGCGTGAGCGGGGACAGCTCCGAGCAGGTGCACCTGGAGGGCTACCAGGTGTCGGGGCAGTGCGGCGCGCTGGTGCGGGACCGCGTGCTGCTGCCCACGCGCGACGCGCCCGACCTCGCCTACGTGCGGGACTCGTCGGAGCACCAGTACGTTCCTGATGTCTACTACAAGAAGAAAAAGTACGGTCAAAGCAGCAGTCGAAATCGAGTACAAACAACAGTAATATCAGAACCTTCGCGTGCCAATGCTCAAGTGTGA

Protein

MLLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKEEITSSKSRQLRDCGLCHGDMIYLNPVNGAVLFEQSSTSSETHRKPLSESSRPVQSSEPGPSTSKVTLPIPPPPPGAPEEDEVDLQLYKVSGLIERQRDEKLCRHNLNGKCVHCTPLEPWDEEYLKEHNIKHMSFHSYLRKITSKNFVSLEELSCKIKPGCREHPAWPRGICSKCQPGAVTLMRQPYRHTDNVLFEHANLVERFLSYWRATGHQRLAWLYGQYESHPDVPLGIRARVAAIYEPPQSSSRDCIALETDPREELVQQIAQRLGLRRVGWIFTDLVPLDVSKGTVKHIRGVDTHFLSAQECITAGHYQNLHPSACRHAASGYFGSKFVTVCVSGDSSEQVHLEGYQVSGQCGALVRDRVLLPTRDAPDLAYVRDSSEHQYVPDVYYKKKKYGQSSSRNRVQTTVISEPSRANAQV

Uniprot

H9J374   A0A2H1V6G3   A0A2W1B5M0   A0A2A4JP23   A0A212F943   A0A1Y1K1B8   + More
N6T0S2   D6WVG6   A0A1W4WSX2   A0A0C9RGM3   A0A0C9RI53   A0A0T6B047   A0A194R3J6   A0A067R112   A0A195F5Z0   K7IWZ8   A0A232F1R6   A0A0J7KDL6   A0A2J7PKV6   A0A3L8DRN6   F4WXE3   A0A151X898   A0A151IS93   A0A195BV11   A0A1B6CST9   E2ALF7   A0A195CYH1   A0A182K7M5   A0A1Y9HDN6   E0VEH8   U5EVM2   Q177R9   A0A182VYZ1   A0A182LTN2   A0A1B6I3K6   A0A182R158   A0A146L6E1   A0A182XBD7   A0A1L8DXH7   A0A182PKI4   A0A1B6HXV2   A0A154P7Q3   A0A1B6LPU9   A0A0N8ES27   A0A182SAI0   A0A2C9GPN6   A0A182KLU9   Q380R2   A0A084VHI6   A0A182XVU4   B0WJW8   A0A1Q3G1Y1   J9JVA1   E2C6G7   A0A088ABL8   W5JGE4   A0A2A3E390   A0A182F6T5   A0A0P5B137   A0A023F2S9   A0A224X964   A0A0P5U1U7   A0A0P5B0A9   A0A0P4ZEA7   A0A0N8BSN6   A0A1B0GH88   A0A0P5AWA7   A0A2M4AFK2   A0A1I8NIJ7   A0A164SEF1   A0A0V0G7N4   A0A1I8NIJ3   A0A2M4CU06   T1I1X9   A0A0P6BKS5   T1PFW9   A0A0Q9X1K3   T1IW71   A0A034W5M9   A0A224Z5A8   B4K4W5   A0A0K8UAD3   A0A034W9S3   A0A131YMX2   A0A0P5NZQ7   A0A0P5WZR6   A0A0K8V1S4   A0A182NS80   L7MFR2   A0A1E1XQY4   A0A1W4VKN7   A0A0P5PK06   A0A131XYC7   A0A0Q9W1F7   A0A1E1X2D9   A0A0P5DQ41   A0A1W4V7W2   A0A0P5P8B9   L7MIJ9   A0A0P6GV18  

Pubmed

19121390    28756777    22118469    28004739    23537049    18362917    + More
19820115    26354079    24845553    20075255    28648823    30249741    21719571    20798317    20566863    17510324    26823975    26999592    20966253    12364791    14747013    17210077    24438588    25244985    20920257    23761445    25474469    25315136    17994087    25348373    28797301    26830274    25576852    29209593    28503490   

EMBL

BABH01036713    BABH01036714    BABH01036715    ODYU01000676    SOQ35854.1    KZ150383    + More
PZC71078.1    NWSH01000930    PCG73506.1    AGBW02009651    OWR50247.1    GEZM01095937    GEZM01095936    JAV55244.1    APGK01056613    KB741277    KB631611    ENN71083.1    ERL84654.1    KQ971357    EFA08302.2    GBYB01012257    JAG82024.1    GBYB01012882    JAG82649.1    LJIG01016389    KRT80748.1    KQ460779    KPJ12378.1    KK852784    KDR16594.1    KQ981805    KYN35592.1    AAZX01000597    AAZX01000613    NNAY01001284    OXU24492.1    LBMM01009234    KMQ88286.1    NEVH01024531    PNF16949.1    QOIP01000005    RLU23115.1    GL888424    EGI61109.1    KQ982431    KYQ56540.1    KQ981102    KYN09474.1    KQ976403    KYM92095.1    GEDC01020903    GEDC01014755    JAS16395.1    JAS22543.1    GL440607    EFN65715.1    KQ977110    KYN05703.1    DS235091    EEB11784.1    GANO01001801    JAB58070.1    CH477372    EAT42394.1    AXCM01009159    GECU01026195    JAS81511.1    AXCN02000202    GDHC01016389    JAQ02240.1    GFDF01002943    JAV11141.1    GECU01028213    JAS79493.1    KQ434823    KZC07238.1    GEBQ01014269    JAT25708.1    GDUN01000634    JAN95285.1    APCN01002053    APCN01002054    AAAB01008987    EAL38499.4    ATLV01013177    KE524842    KFB37430.1    DS231965    EDS29498.1    GFDL01001279    JAV33766.1    ABLF02027236    GL453151    EFN76470.1    ADMH02001255    ETN63422.1    KZ288452    PBC25561.1    GDIP01191426    JAJ31976.1    GBBI01002790    JAC15922.1    GFTR01007550    JAW08876.1    GDIP01121186    JAL82528.1    GDIP01191536    JAJ31866.1    GDIP01215421    JAJ07981.1    GDIQ01148771    JAL02955.1    AJWK01004063    GDIP01193580    JAJ29822.1    GGFK01006250    MBW39571.1    LRGB01002060    KZS09547.1    GECL01001962    JAP04162.1    GGFL01004567    MBW68745.1    ACPB03000283    ACPB03000284    GDIP01013516    JAM90199.1    KA646788    AFP61417.1    CH933806    KRG01947.1    AFFK01019845    GAKP01008071    JAC50881.1    GFPF01010256    MAA21402.1    EDW16118.1    GDHF01028677    JAI23637.1    GAKP01008072    JAC50880.1    GEDV01009121    JAP79436.1    GDIQ01142329    JAL09397.1    GDIP01079882    JAM23833.1    GDHF01019528    JAI32786.1    GACK01002946    JAA62088.1    GFAA01001958    JAU01477.1    GDIQ01148770    JAL02956.1    GEFM01004524    JAP71272.1    CH940652    KRF78947.1    GFAC01005759    JAT93429.1    GDIP01156548    JAJ66854.1    GDIQ01136526    JAL15200.1    GACK01000998    JAA64036.1    GDIQ01041105    JAN53632.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000019118    UP000030742    UP000007266    + More
UP000192223    UP000053240    UP000027135    UP000078541    UP000002358    UP000215335    UP000036403    UP000235965    UP000279307    UP000007755    UP000075809    UP000078492    UP000078540    UP000000311    UP000078542    UP000075881    UP000075900    UP000009046    UP000008820    UP000075920    UP000075883    UP000075886    UP000076407    UP000075885    UP000076502    UP000075901    UP000075840    UP000075882    UP000007062    UP000030765    UP000076408    UP000002320    UP000007819    UP000008237    UP000005203    UP000000673    UP000242457    UP000069272    UP000092461    UP000095301    UP000076858    UP000015103    UP000009192    UP000075884    UP000192221    UP000008792   

PRIDE

H9J374   

Pfam

PF11543   UN_NPL4        + More
PF05021   NPL4
PF05020   zf-NPL4
PF01401   Peptidase_M2

Interpro

IPR016563   Npl4        + More
IPR007717   NPL4_C       
IPR001876   Znf_RanBP2       
IPR029071   Ubiquitin-like_domsf       
IPR007716   NPL4_Zn-bd_put       
IPR037518   MPN       
IPR036443   Znf_RanBP2_sf       
IPR024682   Npl4_Ub-like_dom       
IPR001548   Peptidase_M2       

SUPFAM

SSF54236   SSF54236        + More
SSF90209   SSF90209       

CDD

cd08061  MPN_NPL4

ProteinModelPortal

H9J374   A0A2H1V6G3   A0A2W1B5M0   A0A2A4JP23   A0A212F943   A0A1Y1K1B8   + More
N6T0S2   D6WVG6   A0A1W4WSX2   A0A0C9RGM3   A0A0C9RI53   A0A0T6B047   A0A194R3J6   A0A067R112   A0A195F5Z0   K7IWZ8   A0A232F1R6   A0A0J7KDL6   A0A2J7PKV6   A0A3L8DRN6   F4WXE3   A0A151X898   A0A151IS93   A0A195BV11   A0A1B6CST9   E2ALF7   A0A195CYH1   A0A182K7M5   A0A1Y9HDN6   E0VEH8   U5EVM2   Q177R9   A0A182VYZ1   A0A182LTN2   A0A1B6I3K6   A0A182R158   A0A146L6E1   A0A182XBD7   A0A1L8DXH7   A0A182PKI4   A0A1B6HXV2   A0A154P7Q3   A0A1B6LPU9   A0A0N8ES27   A0A182SAI0   A0A2C9GPN6   A0A182KLU9   Q380R2   A0A084VHI6   A0A182XVU4   B0WJW8   A0A1Q3G1Y1   J9JVA1   E2C6G7   A0A088ABL8   W5JGE4   A0A2A3E390   A0A182F6T5   A0A0P5B137   A0A023F2S9   A0A224X964   A0A0P5U1U7   A0A0P5B0A9   A0A0P4ZEA7   A0A0N8BSN6   A0A1B0GH88   A0A0P5AWA7   A0A2M4AFK2   A0A1I8NIJ7   A0A164SEF1   A0A0V0G7N4   A0A1I8NIJ3   A0A2M4CU06   T1I1X9   A0A0P6BKS5   T1PFW9   A0A0Q9X1K3   T1IW71   A0A034W5M9   A0A224Z5A8   B4K4W5   A0A0K8UAD3   A0A034W9S3   A0A131YMX2   A0A0P5NZQ7   A0A0P5WZR6   A0A0K8V1S4   A0A182NS80   L7MFR2   A0A1E1XQY4   A0A1W4VKN7   A0A0P5PK06   A0A131XYC7   A0A0Q9W1F7   A0A1E1X2D9   A0A0P5DQ41   A0A1W4V7W2   A0A0P5P8B9   L7MIJ9   A0A0P6GV18  

PDB

6CHS     E-value=1.88233e-68,     Score=659

KEGG

101736135    K14015 nuclear protein localization protein 4 homolog | (RefSeq) nuclear protein localization protei

GO

GO:0046872   GO:0006511   GO:0031625   GO:0005634   GO:0043130   GO:0016020   GO:0008241   GO:0008237   GO:0016021   GO:0098586   GO:0015116   GO:0008271   GO:0000166   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

Length:

471

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00090

outside

1  -  471

 

 

Pi

197.613271

Theta

172.177339

Tajima's D

0.341847

CLR

0.179162

CSRT

0.458277086145693

Interpretation

Uncertain