SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10631
Pre Gene Modal
BGIBMGA003960
Annotation
PREDICTED:_sodium-independent_sulfate_anion_transporter-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.513
 

Sequence

CDS
ATGACGAAATACAAACTGAACAACACTATTCGTTCTTCGCCTGAAGTCACACTGACGGCTTACATTGCTGACGACGCTAAGAAACCTGACGAGAAGAAGTACGAGATCGCAGTATTGGACAGCAATCAAAACGACAGTGCCGTGAACGAAAACAACCGCAGTCTCGGGTCGAAGATATGTCACGTTTGTCCTCACCCGTGTGAGTTCGCGAAACACTCCGACCGACTGGCCGCCTCGCTGGTGAAGCAAGAGTGCGACAAATTCGGCTTGAACGAGCTCAGAGTTGAGGGCTTAGAGAAGAACGTGTGTCTGTGCGAGAGATACAACGGAGGCTGCAAACTATGCCCTCGTCCGCTGAATGCCAATTTGAATCTTACGCTGAACGGGCGAGAGTCGTGCTTGGCATGTCACAAGGCGACCGATTCCTACTCTAATACAAATGGATCATATCCAGGAAGTCTGTTCACGAAGACCCCCGTTAGCTGGAGGAGGAAGGCAGCTAGACGCGCCAGAGCGTGTTGCTCCAAGAAAATGCTGCTCCGAAGAGTTCCTATACTGCAGTGGTTACCCAACTACACTTGGCGCAGCGGACTGTCTGATACTATTGCGGGTATAACGGTGGGTCTCACAGTCATACCTCAGGCTATAGCTTATGCCGGAGTGGCCGGCTTGCCGCCGCAGTATGGACTCTACTCCTCATTTATGGCCTGCTTCGTTTACACGATCTTCGGTTCAGTAAAGGACTCGGCTATAGGTCCCACCGCTATCGCCGCTATACTGACGCGGGAAAATCTCCACGGCCTGGGACCAGAATTTGCTGTTCTACTGGCCTTTCTGTCTGGGTGCGTGGAGCTGGTCATGGGAATGTTGCAATTAGGTTTTCTGATTGACTTCATCAGCGGTCCGGTCTCCGTTGGGTTCACATCTGCCGCTGCCATCATCATAGCCACTACTCAGGTTAAAGACATCCTCGGGTTAAGCTTCCCTGGTGGCAAGTTTATTCAGGTGTGGACGGGGATATACGAACACATCGGTGAGACTCGACTCTGGGACACTGTGCTCGGTGTAACTTGTATCGTTGTACTGCTTCTGTTGAGGAAAGTCAAGGATATAAGCGTGAAGGTCGATGAGAGTTCAGGCAAGACCAGGCGTCTGCGTAAGGCCGCCTCGCAGACACTGTGGCTCGTGTCCACCACGCGGAACATCCTGGTGGTGCTGGCCTGTGCATCATTGGCCTACTACTTCGACACGAGGCAGTTGCAACCTTTCGTTTTAACTGGTGAAGTAAAGGCGGGGCTACCACAGATCTCCCCCCCACCATTCTCCGCCACGGTCGGTAACCACACGTACACGTTTGTGGAGATGGCATCCACCCTCGGATCAGCGATATTCGTGGTGCCACTCCTCTCTATTTTAGAGAATATAGCGTTGGCTAAAGTTTTTTCGGAGGGTAAGTACGTGGACGCGACGCAAGAGATGCTGGCTCTGGGCGTGTGCAACATGGTGTCGGCGCTGGTGGACAGTATGCCGGTGTCGGGGGCGCTGTCCCGCGGCGCCGTCAACCACGCCTCCGGGGTCGCCACCACCGCCTCGGGCCTCTGGGCCGGCGCGCTGGTGCTGCTCGCGCTACAGTATTTCACGCCGTATTTCTACTACATTCCGAAAGCGTCATTGGCTGCCGTCATCATTGCTGCTGTGGTCTTCATGATGGAACTGCACGTCTTCAAACCTATATGGAGGACGAAAAAAATCGATATAATCCCCGCGGTGGTGACGTTCGGCTCTTGTCTCATGCTGCGACTGGAGCTTGGCATCGTCATAGGCATCGGCGTTAACTTGCTGTTCCTGCTGTATGCCTCCGCGAGACCCTCCGTCAAGGTCACGCGGGCCACCTCTGCGAGCGGCGTGGAGCACGTGGTGGCGGCGGTGGGCAGCGCGCTGTCGTTCCCGGCGGCGGAGTTCGTGCGGCGCGCGCTGCACAAGGCGGCGCCGCGCCTGCCGCTCGTGGTGGACGCGACGCACGTCAGGGCGGCAGACTTCACCGCCGCAGAGGGTATCAAGGCGTTAATTGAAGATTTCGAGTCTCGTGGGCAAACGCTGATCTTCTACAACGTGTCTCCGTCGCTGGGCAGCGTGCTGCAGGGCGTGCGGCCCCGGAGACTGCTGGTGTGCTCCTCCGCCACTCAGCTGGACCTGCTGCTCGTGCAAGCCACGCAGCAAAGCCTCACCAACTCATAG
Protein
MTKYKLNNTIRSSPEVTLTAYIADDAKKPDEKKYEIAVLDSNQNDSAVNENNRSLGSKICHVCPHPCEFAKHSDRLAASLVKQECDKFGLNELRVEGLEKNVCLCERYNGGCKLCPRPLNANLNLTLNGRESCLACHKATDSYSNTNGSYPGSLFTKTPVSWRRKAARRARACCSKKMLLRRVPILQWLPNYTWRSGLSDTIAGITVGLTVIPQAIAYAGVAGLPPQYGLYSSFMACFVYTIFGSVKDSAIGPTAIAAILTRENLHGLGPEFAVLLAFLSGCVELVMGMLQLGFLIDFISGPVSVGFTSAAAIIIATTQVKDILGLSFPGGKFIQVWTGIYEHIGETRLWDTVLGVTCIVVLLLLRKVKDISVKVDESSGKTRRLRKAASQTLWLVSTTRNILVVLACASLAYYFDTRQLQPFVLTGEVKAGLPQISPPPFSATVGNHTYTFVEMASTLGSAIFVVPLLSILENIALAKVFSEGKYVDATQEMLALGVCNMVSALVDSMPVSGALSRGAVNHASGVATTASGLWAGALVLLALQYFTPYFYYIPKASLAAVIIAAVVFMMELHVFKPIWRTKKIDIIPAVVTFGSCLMLRLELGIVIGIGVNLLFLLYASARPSVKVTRATSASGVEHVVAAVGSALSFPAAEFVRRALHKAAPRLPLVVDATHVRAADFTAAEGIKALIEDFESRGQTLIFYNVSPSLGSVLQGVRPRRLLVCSSATQLDLLLVQATQQSLTNS

Summary

Similarity
Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
EMBL
NWSH01004565    PCG64919.1    KZ149989    PZC75632.1    AGBW02009651    OWR50240.1    + More
BABH01036699    BABH01036700    BABH01036701    BABH01036702    KQ459144    KPJ03675.1    KQ460779    KPJ12388.1    ODYU01008954    SOQ52983.1    KK852421    KDR24301.1    KQ971361    EFA05122.1    DS235156    EEB12660.1    KQ976514    KYM82269.1    QOIP01000010    RLU18002.1    LBMM01001414    KMQ96365.1    KK107167    EZA56467.1    GL888147    EGI66553.1    GEDC01030992    JAS06306.1    KQ981724    KYN37236.1    GL452471    EFN77149.1    LJIG01000412    KRT86528.1    GBGD01000966    JAC87923.1    GFTR01007289    JAW09137.1    GBBI01002547    JAC16165.1    GDKW01003168    JAI53427.1    ACPB03015825    KZ288400    PBC26292.1    KQ978538    KYN30257.1    GL434761    EFN74608.1    NNAY01003020    OXU20103.1    KQ414665    KOC65145.1    GGMS01014215    MBY83418.1    ABLF02032283    ABLF02032286    ABLF02032290    ABLF02032292    GFXV01001159    MBW12964.1    GBHO01006039    JAG37565.1    GBHO01006041    GBHO01006040    GBRD01002176    JAG37563.1    JAG37564.1    JAG63645.1    GDHC01003426    JAQ15203.1    GDHC01019650    JAP98978.1    KQ982877    KYQ49702.1    KQ435912    KOX68890.1    KB632424    ERL95346.1    APGK01040018    APGK01040019    KB740975    ENN76516.1    KQ760116    OAD61939.1    NEVH01016331    PNF25529.1    PNF25526.1    KQ971363    EFA07819.1    KK852498    KDR22565.1    GEDC01022690    JAS14608.1    DS235051    EEB10996.1    KDR24302.1    PYGN01001181    PSN36843.1    GALX01001643    JAB66823.1    KQ759878    OAD62248.1    AXCN02001614    GL449511    EFN82619.1    GEDC01011801    JAS25497.1    GBYB01011218    GBYB01011219    JAG80985.1    JAG80986.1    GDAI01000881    JAI16722.1    KQ435010    KZC13728.1    KQ459603    KPI92998.1    GFDF01009163    JAV04921.1    KK107046    QOIP01000004    EZA61752.1    RLU23357.1    AJVK01019779    KZ288289    PBC29243.1    GL441216    EFN65015.1    AJWK01017158    AJWK01017159    AJWK01017160    AJWK01017161    AJWK01017162    AJWK01017163    KQ981522    KYN40712.1    AXCM01000024    APGK01041487    APGK01041488    APGK01041489    APGK01041490    KB740994    ENN75938.1    GBGD01000827    JAC88062.1    GGFM01006501    MBW27252.1    GGFK01002679    MBW36000.1    AJVK01019712    ADMH02000060    ETN67956.1    KB632356    ERL93394.1    KQ978143    KYM96789.1    GGFJ01002996    MBW52137.1    GGFJ01002995    MBW52136.1    ADTU01026210    KQ976445    KYM86093.1    ODYU01000799    SOQ36122.1    AJWK01027790    KQ978691    KYN29266.1    JR039342    AEY58647.1    CH477329    EAT43399.1   
Pfam
PF00916   Sulfate_transp        + More
PF01740   STAS
Interpro
IPR018045   S04_transporter_CS        + More
IPR001902   SLC26A/SulP_fam       
IPR002645   STAS_dom       
IPR011547   SLC26A/SulP_dom       
IPR036513   STAS_dom_sf       
IPR036034   PDZ_sf       
IPR011993   PH-like_dom_sf       
IPR001478   PDZ       
SUPFAM
SSF52091   SSF52091        + More
SSF50156   SSF50156       
Gene 3D
PDB
5DA0     E-value=3.78546e-10,     Score=158

Ontologies

Topology

Subcellular location
Membrane  
Length:
745
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
230.60851
Exp number, first 60 AAs:
0
Total prob of N-in:
0.87962
inside
1  -  200
TMhelix
201  -  223
outside
224  -  237
TMhelix
238  -  260
inside
261  -  266
TMhelix
267  -  289
outside
290  -  293
TMhelix
294  -  316
inside
317  -  392
TMhelix
393  -  415
outside
416  -  449
TMhelix
450  -  472
inside
473  -  523
TMhelix
524  -  546
outside
547  -  555
TMhelix
556  -  575
inside
576  -  595
TMhelix
596  -  618
outside
619  -  745
 
 

Population Genetic Test Statistics

Pi
160.208835
Theta
164.617464
Tajima's D
-0.855415
CLR
1.501934
CSRT
0.171391430428479
Interpretation
Uncertain
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