Gene

KWMTBOMO10630

Pre Gene Modal

BGIBMGA003938

Annotation

transcription_factor_Ets_[Bombyx_mori]

Location

Bomo_Chr17(-):16429539-16460415      View in EpiBrowser

Transcription factor

ETS

Location in the cell

Nuclear   Reliability : 4.055

CDS

ATGATTGATTACGCGCGCCCCTTCGAGCAGAGCACGTGCGACATCTACTACACCCAGACGACCTCAGCGCCCACCCGCCTCGACGACTTCCAAGTCTTCAGGAGAGGAAACGCTTCTCACATATACGGAAACTACTACTCCAATCCTTCATACGACGCGTACGAAGAGCCTGAGATTGAAAATGCTGCCAATGTTTACCACACCCTCGTCAGCTGCAGAGAGTACCACCGAGATGATTGGAAGTACAAAGTGGTGGTCGATTGGACCGAAGATGATACAGTTTCGTGGATAGTCGACACAGCCCAGAGCATAGGTATCAGTGAATACGATATACCGTTCTTTAACTACAGAGTGACTGGCTTGGATCTACGGAACATGAAGCGTGAAGACTTCGTCCAACGGATGGCCCATCCAAGCATGGACCCTGTCGCTTCGAGGAAGATAGGAGATAACATTTTCGACAGACTCCACACTAGACTAAATGAAGATATGTTCAGACAATCTTCAATATTTAGATATGCGGAAAGTGAGCCTTACCATCACGAGCAGCAGACCATGCTAGATCTAGACGCCGCAGACCACAAAAACAGAATGTACGCCTCAGATTATAAACCAAACGACCAGACATTACTGCAAGGACCTTGCGACTCCAGTGATGACGCAGAAGATGTTTTCCGGTCTGAGGAGACAGCCTCCCCGGAGTACTCGTATGGAAGCGACGTCAGTAAATCAGGAGACGAGGATGATAAGAGGAAAATGTCGAAGCGGCCACCGGGGAGACCGCGGGGCAGCGGCCGGAAAACATCCATAAAGCGACCGAGAAGCGTTTCCGTGCCGGAGTTCTTAAGGAATCTCTTGTTCGATCCCAAATACTGCCCGTCCATCATCAAATGGGAAGACTACGCATTAGGAAAGTTCAGATTCGTGAAACCGGACGAAGTCGCAAAACTATGGGGCAAGATGAAGCAAAATGACAACATGACCTTCGAGAAGTTCAGCCGAGCGATGCGGTACCACTACCGGCAGTCCGTGCTGGTCTCCGTCCCGACCGCGAGACTGGTCTACCAGTTCGGACCGAAGGGCCCCGACATAAAGACGGACAATCCAAACTTCATCAAAGTCAAATCAGAAAATGAACAAGAAAACTATAACTGCGTTTTGAATTGTTAA

Protein

MIDYARPFEQSTCDIYYTQTTSAPTRLDDFQVFRRGNASHIYGNYYSNPSYDAYEEPEIENAANVYHTLVSCREYHRDDWKYKVVVDWTEDDTVSWIVDTAQSIGISEYDIPFFNYRVTGLDLRNMKREDFVQRMAHPSMDPVASRKIGDNIFDRLHTRLNEDMFRQSSIFRYAESEPYHHEQQTMLDLDAADHKNRMYASDYKPNDQTLLQGPCDSSDDAEDVFRSEETASPEYSYGSDVSKSGDEDDKRKMSKRPPGRPRGSGRKTSIKRPRSVSVPEFLRNLLFDPKYCPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTARLVYQFGPKGPDIKTDNPNFIKVKSENEQENYNCVLNC

Similarity

Belongs to the ETS family.

Uniprot

Q7YT29   H9J351   A0A1E1W8J8   A0A2A4JFN7   A0A2W1BMW5   A0A3S2LUC0   + More
A0A212F959   A0A0L7LRQ8   A0A2H1X3H4   A0A194QDP9   A0A194R944   A0A232FGT5   K7J2R7   A0A1B6CUP1   A0A069DRK5   A0A1B6GA28   A0A1B6JH18   T1IFW7   A0A3N0Z8M1   A0A091I8S9   A0A091RM88   A0A091LRU8   A0A091L7X4   W5LZE4   A0A094KX08   A0A091W6X8   A0A094N2E8   A0A0Q3PFY1   A0A091GX67   A0A093PZ63   A0A087VEJ7   A0A093BP63   A0A093INZ9   A0A091P3D1   A0A091MT64   A0A091IX39   A0A3L8SY36   A0A093IN71   A0A091UZN7   A0A093FJ57   A0A093NTT0  

Pubmed

19121390    28756777    22118469    26227816    26354079    28648823    + More
20075255    26334808    30282656   

EMBL

AB115082    BAC79385.1    BABH01036689    GDQN01007770    JAT83284.1    NWSH01001758    + More
PCG70240.1    KZ149989    PZC75631.1    RSAL01000214    RVE44156.1    AGBW02009651    OWR50239.1    JTDY01000233    KOB78137.1    ODYU01013188    SOQ59881.1    KQ459144    KPJ03678.1    KQ460779    KPJ12391.1    NNAY01000262    OXU29649.1    GEDC01020161    JAS17137.1    GBGD01002573    JAC86316.1    GECZ01010480    JAS59289.1    GECU01009100    JAS98606.1    ACPB03011452    RJVU01006614    ROL54604.1    KL217512    KFO96160.1    KK821679    KFQ40342.1    KK507425    KFP61851.1    KL300816    KFP51240.1    AHAT01008110    AHAT01008111    AHAT01008112    KL347117    KFZ56495.1    KK734865    KFR11229.1    KL263776    KFZ60896.1    LMAW01002957    KQK75188.1    KL513218    KFO87117.1    KL416191    KFW81656.1    KL490387    KFO11039.1    KN126377    KFU89332.1    KK592983    KFW01357.1    KK667918    KFQ02507.1    KL371086    KFP80546.1    KK501032    KFP12153.1    QUSF01000004    RLW10341.1    KK563900    KFW03103.1    KL410337    KFQ96146.1    KK394783    KFV56655.1    KL225115    KFW67546.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000037510    UP000053268    + More
UP000053240    UP000215335    UP000002358    UP000015103    UP000054308    UP000018468    UP000053605    UP000051836    UP000053119    UP000276834    UP000053283    UP000054081   

PRIDE

Q7YT29    H9J351   

Pfam

PF00178   Ets        + More
PF02198   SAM_PNT

Interpro

IPR013761   SAM/pointed_sf        + More
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR003118   Pointed_dom       
IPR000418   Ets_dom       
IPR033071   EHF       

SUPFAM

SSF46785   SSF46785        + More
SSF47769   SSF47769       

Gene 3D

1.10.10.10     1.10.150.50    

ProteinModelPortal

Q7YT29   H9J351   A0A1E1W8J8   A0A2A4JFN7   A0A2W1BMW5   A0A3S2LUC0   + More
A0A212F959   A0A0L7LRQ8   A0A2H1X3H4   A0A194QDP9   A0A194R944   A0A232FGT5   K7J2R7   A0A1B6CUP1   A0A069DRK5   A0A1B6GA28   A0A1B6JH18   T1IFW7   A0A3N0Z8M1   A0A091I8S9   A0A091RM88   A0A091LRU8   A0A091L7X4   W5LZE4   A0A094KX08   A0A091W6X8   A0A094N2E8   A0A0Q3PFY1   A0A091GX67   A0A093PZ63   A0A087VEJ7   A0A093BP63   A0A093INZ9   A0A091P3D1   A0A091MT64   A0A091IX39   A0A3L8SY36   A0A093IN71   A0A091UZN7   A0A093FJ57   A0A093NTT0  

PDB

3JTG     E-value=3.00925e-18,     Score=225

KEGG

692446    K17102 ETS homologous factor | (RefSeq) Ets, BmEts; transcription factor Ets

GO

GO:0003700   GO:0005634   GO:0043565   GO:0003677   GO:0030855   GO:0006366   GO:0050673   GO:0030154   GO:0000981   GO:0006357   GO:0006355   GO:0000166   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

PANTHER

PTHR11849:SF171  

Subcellular location

Nucleus  

Length:

389

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00439

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00843

outside

1  -  389

 

 

Pi

177.165203

Theta

156.85871

Tajima's D

0.556185

CLR

0.42439

CSRT

0.531623418829059

Interpretation

Uncertain