Gene

KWMTBOMO10624

Pre Gene Modal

BGIBMGA003941

Annotation

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr17(-):16028434-16031256      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.815 PlasmaMembrane   Reliability : 1.357

CDS

ATGGAGAGAGAACTGAAAGACAAAATTGTCGTAATAACAGGGGGAGCATGCGGAATTGGTTTTAGTATTGCTGAAAAATACTTACAAAACCAAGTAGCAGCAGTAATAATTTTAGACACACAACAAGAAAAAGGAGAAAAATCAACTAAGATATTAAATGAAAAATACGGAAACAAAGCTATATTCAAGAAATGTGACGTCACTACAGATTTAGACCTGATTTATTGTGAAATAATCAACGCATATAAATACGTAGATATTTTGATAAACAATGCTGGAATTTCTGAAAGAGACAACCCTAGATTAACAATGAATGTCAACGCTTTAGCACCGATCGAATGGACCCTAAAATTCAGGAAACACATGAGCAAAGAGAATGGAGGAAAAGGCGGAACTATTCTGAACATGGGATCTCTTTTTGGTATTCGTTCCTCATACTTCGGACCTGTATATCAAGCTTCGAAACATGCCCTCAATGGTTTTACAAAAGCTATTGGCCATCAGTTCAATTTTGATAACAGCGGTGTGAGAGTAATTGCTCTGTGTCCAGGTTTTACAACAACGTCTTTAGTTAAAAAATATTTAGATGAAGATGCTGAGAAGAATATCCCTAGTCATATTTTAGAGTTCGTTAGGAGCATGAAGTTTCAGAGTGTGGATGCCGTCAGTAACGCTGCCGTAGATATTTTCGTCAAAGCCGAAACTGGAACTATTTGGGTTATTGAAAATAACGTTTTATTACAACACGAATACGAAATGTGA

Protein

MERELKDKIVVITGGACGIGFSIAEKYLQNQVAAVIILDTQQEKGEKSTKILNEKYGNKAIFKKCDVTTDLDLIYCEIINAYKYVDILINNAGISERDNPRLTMNVNALAPIEWTLKFRKHMSKENGGKGGTILNMGSLFGIRSSYFGPVYQASKHALNGFTKAIGHQFNFDNSGVRVIALCPGFTTTSLVKKYLDEDAEKNIPSHILEFVRSMKFQSVDAVSNAAVDIFVKAETGTIWVIENNVLLQHEYEM

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J354   A0A0H4TDA9   S4PIB4   A0A194R949   A0A212F911   A0A0L7KQW0   + More
A0A194R584   A0A2H1VR53   A0A194R4F0   I4DKW3   A0A1L8D6N5   D2SNK3   A0A2A4JIR0   A0A2W1BSK9   A0A0F6Q0X5   A0A0L7K2F9   A0A2W1BR60   A0A0H4TD16   A0A194R3L5   H9J369   A0A194QJQ6   A0A2H1VSR5   A0A0L7LJP6   A0A0F6Q0W0   A0A0F6Q2J9   U5KC20   A0A0H4TH26   A0A0F6Q4H7   A0A212F936   A0A2H1VNC8   A0A2W1BL60   H9J353   H9J8J0   H9JWW1   H9J8I5   Q1HPX6   H9J8I4   H9JYK0   H9JWW0   H9J8I9   H9J8I6   H9JWW7   A0A076FT29   H9JWW6   A0A1Y1MVB3   A0A2A4JJW8   Q6RUR3   A0A194QA61   E2A712   A0A0L7K392   E2B6N2   K7IM44   A0A0J7L0X1   D6WT10   R4FLI9   K7IM43   A0A1Y1MAW1   A0A151WLU8   A0A3S2NQL5   H9JQQ4   A0A0J7NFD4   D6WGE5   K7IV86   A0A026WK66   A0A067QWG1   A0A2H1WL48   A0A195B3G3   A0A151X250   A0A232EGH1   F4W474   E0VAP2   A0A212F0I1   A0A195ET92   A0A195E5P2   A0A0L7QSU5   A0A194QRC6   A0A195E4S8   A0A2A4JPA8   A0A0N1INL6   A0A026WRA5   A0A2W1BRA8   A0A2J7QGZ8   F4W475   A0A139WKA8   A0A195EUB2   A0A194Q1E5   A0A023F7A3   A0A2H8TFE7   A0A151X1L8   A0A0N0PD11   A0A1Y1LZE8   A0A0L7QT43   A0A224XI56   A0A088A500   A0A2S2NV02   A0A0P4WG45   B3V0K9   A0A1B6DW76   A0A158NP60   A0A212FP41  

Pubmed

19121390    23622113    26354079    22118469    26227816    22651552    + More
20074338    28756777    24053512    24817326    28004739    20798317    20075255    18362917    19820115    24508170    30249741    24845553    28648823    21719571    20566863    25474469    18622569    21347285   

EMBL

BABH01036642    KP899549    AKQ06148.1    GAIX01005455    JAA87105.1    KQ460779    + More
KPJ12396.1    AGBW02009651    OWR50236.1    JTDY01007189    KOB65394.1    KPJ12400.1    ODYU01003911    SOQ43256.1    KPJ12399.1    AK401931    KQ459144    BAM18553.1    KPJ03685.1    GEYN01000013    JAV02116.1    EZ407131    ACX53694.1    NWSH01001322    PCG71699.1    KZ149989    PZC75626.1    KP237899    AKD01752.1    JTDY01017041    KOB51868.1    PZC75627.1    KP899551    AKQ06150.1    KPJ12398.1    BABH01036649    KPJ03686.1    SOQ43254.1    JTDY01000876    KOB75589.1    KP237884    AKD01737.1    KP237873    AKD01726.1    KC007343    AGQ45608.1    KP899550    AKQ06149.1    KP237875    AKD01728.1    OWR50237.1    ODYU01003471    SOQ42306.1    PZC75628.1    BABH01036648    BABH01027538    BABH01043464    BABH01027529    BABH01027530    DQ443276    ABF51365.1    BABH01027525    BABH01044234    BABH01043465    BABH01027533    BABH01040078    KF960802    AII22004.1    GEZM01023447    JAV88385.1    PCG71700.1    AY491503    AAR84629.1    KQ459249    KPJ02362.1    GL437252    EFN70744.1    JTDY01013396    KOB52144.1    GL446000    EFN88616.1    LBMM01001364    KMQ96442.1    KQ971354    EFA05875.1    ACPB03004191    GAHY01001368    JAA76142.1    GEZM01036109    GEZM01036108    JAV82969.1    KQ982944    KYQ48859.1    RSAL01000010    RVE53718.1    BABH01012284    BABH01012285    LBMM01005734    KMQ91250.1    KQ971329    EFA01117.2    AAZX01008191    KK107200    QOIP01000002    EZA55494.1    RLU25832.1    KK852879    KDR14474.1    ODYU01009339    SOQ53696.1    KQ976625    KYM79033.1    KQ982585    KYQ54300.1    NNAY01004765    OXU17447.1    GL887491    EGI71070.1    DS235012    EEB10448.1    AGBW02011082    OWR47240.1    KQ981979    KYN31470.1    KQ979609    KYN20169.1    KQ414755    KOC61723.1    KQ461175    KPJ07894.1    KYN20168.1    NWSH01000980    PCG73283.1    KQ461161    KPJ08013.1    KK107119    QOIP01000009    EZA58570.1    RLU18591.1    KZ149967    PZC76155.1    NEVH01014359    PNF27833.1    EGI71071.1    KYB28353.1    KYN31469.1    KQ459590    KPI97220.1    GBBI01001633    JAC17079.1    GFXV01001021    MBW12826.1    KYQ54299.1    KQ460366    KPJ15584.1    GEZM01045515    JAV77770.1    KOC61724.1    GFTR01004259    JAW12167.1    GGMR01008279    MBY20898.1    GDRN01065431    JAI64685.1    EU622636    ACF19426.1    GEDC01007377    JAS29921.1    ADTU01001531    AGBW02003646    OWR55516.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000037510    UP000053268    UP000218220    + More
UP000000311    UP000008237    UP000002358    UP000036403    UP000007266    UP000015103    UP000075809    UP000283053    UP000053097    UP000279307    UP000027135    UP000078540    UP000215335    UP000007755    UP000009046    UP000078541    UP000078492    UP000053825    UP000235965    UP000005203    UP000005205   

PRIDE

H9J354    H9J369    H9J353    H9J8J0    H9JWW1    H9J8I5    + More
Q1HPX6    H9J8I4    H9JYK0    H9JWW0    H9J8I9    H9J8I6    H9JWW7    H9JWW6    H9JQQ4   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J354   A0A0H4TDA9   S4PIB4   A0A194R949   A0A212F911   A0A0L7KQW0   + More
A0A194R584   A0A2H1VR53   A0A194R4F0   I4DKW3   A0A1L8D6N5   D2SNK3   A0A2A4JIR0   A0A2W1BSK9   A0A0F6Q0X5   A0A0L7K2F9   A0A2W1BR60   A0A0H4TD16   A0A194R3L5   H9J369   A0A194QJQ6   A0A2H1VSR5   A0A0L7LJP6   A0A0F6Q0W0   A0A0F6Q2J9   U5KC20   A0A0H4TH26   A0A0F6Q4H7   A0A212F936   A0A2H1VNC8   A0A2W1BL60   H9J353   H9J8J0   H9JWW1   H9J8I5   Q1HPX6   H9J8I4   H9JYK0   H9JWW0   H9J8I9   H9J8I6   H9JWW7   A0A076FT29   H9JWW6   A0A1Y1MVB3   A0A2A4JJW8   Q6RUR3   A0A194QA61   E2A712   A0A0L7K392   E2B6N2   K7IM44   A0A0J7L0X1   D6WT10   R4FLI9   K7IM43   A0A1Y1MAW1   A0A151WLU8   A0A3S2NQL5   H9JQQ4   A0A0J7NFD4   D6WGE5   K7IV86   A0A026WK66   A0A067QWG1   A0A2H1WL48   A0A195B3G3   A0A151X250   A0A232EGH1   F4W474   E0VAP2   A0A212F0I1   A0A195ET92   A0A195E5P2   A0A0L7QSU5   A0A194QRC6   A0A195E4S8   A0A2A4JPA8   A0A0N1INL6   A0A026WRA5   A0A2W1BRA8   A0A2J7QGZ8   F4W475   A0A139WKA8   A0A195EUB2   A0A194Q1E5   A0A023F7A3   A0A2H8TFE7   A0A151X1L8   A0A0N0PD11   A0A1Y1LZE8   A0A0L7QT43   A0A224XI56   A0A088A500   A0A2S2NV02   A0A0P4WG45   B3V0K9   A0A1B6DW76   A0A158NP60   A0A212FP41  

PDB

2GDZ     E-value=2.34685e-28,     Score=310

KEGG

101735322    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0004022   GO:0016491   GO:0005737   GO:0016404  

Length:

253

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.62269

Exp number, first 60 AAs:

0.48575

Total prob of N-in:

0.11722

outside

1  -  253

 

 

Pi

213.867148

Theta

170.090055

Tajima's D

0.593739

CLR

0.073049

CSRT

0.542522873856307

Interpretation

Uncertain