Gene

KWMTBOMO10612

Pre Gene Modal

BGIBMGA003950

Annotation

PREDICTED:_solute_carrier_family_23_member_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(-):15776778-15803017      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.971

CDS

ATGAGTAAAATTGACTGTCAATATGATTTGGTTAGTTCGGAGTGCGTCAATGATGTACGAGGTGAACAGAAACCAGAGGAGGCACGCAAAGGCAATGTCACGTATGGGATCGACGACACGCCGCCCTGGTACCTCTGTATATTCATGGCTTTACAGCATTACCTGACGATGATTGGGGCCATTGTCGCGATCCCGTTCATCCTCTGCCCGGCTCTCTGCATGGAGGAAACAGATCCAGACCGATCCAATATTATATCTACTATGATATTTGTCACAGGTTTAATAACCTGGCTTCAGGCGACCTTCGGCTGTCGACTGCCTATAGTTCAAGGCGGCACCATATCATTTCTGGTGCCGACGCTCGCGATACTGAACCTGCCGGCCTGGAAGTGTCCCGAGGAGGAGATCTTGGTCGCCATGAGTACCGAAGAACGGCGACAGGTGTGGACGAGTAGGATGTGTGAACTGTCCGGCGCCATCGCAGTTGCGGCTTTATTCCAATTGTTTTTAGGATACTTCGGTGTGATCGGGTCGCTGTTGAGGTTCGTGACCCCGTTGACGATAGCTCCCACGGTGGCGCTGGTCGGACTCACGCTGTTCGACCACGCAGCGGAAGCCGCGTCGCAGCAATGGGGCATCGCAGCTGGCACTTTCATTCTGCTGACGATATTCTCTCAATGCATGACCAACGTGAACATCCCAACTCTGTCCTACAACAGGGACAGTGGTTGCACCGTTGCTTGGTTCCCGCTCTTCAAGCTATTCCCGGTTTTACTAACAATAATAATCATGTGGGCAGTCTGTGGCATCTTGACCGTGACCGGAGTATTTCCTCCAGAGCATCCGGCCCGGACCGACCTCAAGGTCAATATCATTGAAGATGCTCCATGGTTCAGGATACCTTATCCAGGTCAATGGGGCGCACCGACGGTAAGTGTGGCCGGCGTACTGGGCATGCTGGCAGGGGTCTTGGCTTGTACAGTGGAGTCTATAAGCTACTACCCTACAACTGCTCGAATGTGCGGTGCTCCACCCCCTCCCCTGCACGCCATCAACCGCGGGCTGGGCACCGAGGGGCTGGGCACGGCGCTGGCCGGGCTCTGGGGCTCCGGGAACGGGACCAACACCTTCGGAGAGAATGTCGGCGCCATCGGGGTCACCAAGGTCGGGTCACGGCGCGTGGTGCAATTCGCCGCCGGCCTCATGGTGCTGCAGGGGGTCGTGGGCAAGCTGGGAGCCGTGTTCATCATCATCCCGCAGCCCGTAGTCGGCGGCCTCTTCTGCGTTATGTTCGGAATGATATCGGCCTTCGGTCTCTCAGCACTTCAGTACGTGGACCTGAACAGCTCGAGGAACCTGTACATCATAGGGTTCAGCCTGTTCTTCCCGCTGGTCCTGACCCGGTGGATGGCGGCTCACAGCGGCGTCATACACACGGGGCTGGAGGCGCTGGACGCGGTGCTCCAAGTGCTGCTGTCCACCTCCATACTCGTGGGGGGCGCCGTCGGCTGTCTGTTGGACAACGTGATCCCTGGTACTGATGAAGAGCGAGGGCTGGCGGCCTGGGCTAAGGAGATGTCTTTAGAAGCAGCTGGAGCCTCCGACGATGGAGACACCTATGACTTTCCCATCGGCATGAGCCTGATACGACGCTGGAAATGGACTTATTACCTTCCGTTTATGCCAACTTATGAAAAAGGGAAATTCACAGCGTTGTTCATAAAGAAGAAATTGTAA

Protein

MSKIDCQYDLVSSECVNDVRGEQKPEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPEEEILVAMSTEERRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLLRFVTPLTIAPTVALVGLTLFDHAAEAASQQWGIAAGTFILLTIFSQCMTNVNIPTLSYNRDSGCTVAWFPLFKLFPVLLTIIIMWAVCGILTVTGVFPPEHPARTDLKVNIIEDAPWFRIPYPGQWGAPTVSVAGVLGMLAGVLACTVESISYYPTTARMCGAPPPPLHAINRGLGTEGLGTALAGLWGSGNGTNTFGENVGAIGVTKVGSRRVVQFAAGLMVLQGVVGKLGAVFIIIPQPVVGGLFCVMFGMISAFGLSALQYVDLNSSRNLYIIGFSLFFPLVLTRWMAAHSGVIHTGLEALDAVLQVLLSTSILVGGAVGCLLDNVIPGTDEERGLAAWAKEMSLEAAGASDDGDTYDFPIGMSLIRRWKWTYYLPFMPTYEKGKFTALFIKKKL

Uniprot

A0A2W1BNU3   A0A2H1VRE4   A0A194R4G0   A0A194QE44   A0A212FM19   A0A3S2TMB4   + More
S4NU22   H9J363   A0A310SHS1   A0A067QHL7   A0A1S4G4U5   A0A1Q3FPF9   A0A232EKA6   A0A1Q3FQ97   A0A1S4ESK3   A0A1B6LHR0   K7IQC0   A0A1S4ES56   A0A1S3DT63   B0WBR5   A0A023ETZ6   A0A088AJ02   A0A0N0U396   Q7PQS2   A0A182XE63   A0A182HJ60   A0A182UYW0   Q8MU86   A0A182QQN7   A0A182LCC8   A0A158P1W7   A0A182VXG1   A0A2H8TTW7   A0A2A3EJN5   A0A195DMP7   A0A084WE44   A0A182PAH0   A0A182R381   U5EQ67   A0A182FQB3   W5JVS4   A0A182NFS8   A0A182KF56   A0A182JHQ1   A0A146KT52   A0A195EQF7   A0A1Q3FQ88   A0A182MFJ0   A0A1Q3FPR7   E2BK87   J9HJC0   B3P1P3   Q9VH02   A0A1W4UL97   B4PKN8   B4QV92   B3LW00   A0A154PD37   A0A195AW94   B4HIU6   Q29AL1   A0A182G8R0   A0A151I7U3   B4G6A9   A0A0L0CEI9   A0A1L8DEJ7   A0A3B0KGY7   W8C4N8   A0A336MD77   T1PBW6   A0A1I8N899   A0A1I8P706   B4K534   A0A2J7PUZ0   A0A182TXI1   A0A151WP90   A0A0A1WXM8   A0A0K8V395   A0A034VT03   A0A2J7PUX2   A0A182SZ80   A0A1B0G976   B4JIM5   A0A1A9V938   B4NJP7   A0A0Q9WXK1   A0A1J1HHC5   B4LWC2   A0A0M4EQ45   A0A1B0BGS8   A0A1L8DE48   A0A0R1E272   A0A0L0CHX4   A0A1A9WLR9   F4W645   A0A1A9Y8Z0   A0A0L7RJK9   A0A182XWU4   A0A2S2Q6X2   A0A1A9ZRP4  

Pubmed

28756777    26354079    22118469    23622113    19121390    24845553    + More
28648823    20075255    24945155    12364791    14747013    17210077    20966253    21347285    24438588    20920257    23761445    26823975    20798317    17510324    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    26483478    26108605    24495485    25315136    25830018    25348373    21719571    25244985   

EMBL

KZ150001    PZC75304.1    ODYU01003994    SOQ43421.1    KQ460779    KPJ12409.1    + More
KQ459144    KPJ03694.1    AGBW02007658    OWR54793.1    RSAL01000054    RVE49997.1    GAIX01011986    JAA80574.1    BABH01036619    KQ766110    OAD53739.1    KK853366    KDR08101.1    GFDL01005555    JAV29490.1    NNAY01003869    OXU18741.1    GFDL01005265    JAV29780.1    GEBQ01016789    JAT23188.1    DS231881    EDS42686.1    GAPW01000748    JAC12850.1    KQ435922    KOX68501.1    AAAB01008879    EAA08390.2    APCN01002126    AF533893    AAM97678.1    AXCN02000244    ADTU01006902    ADTU01006903    ADTU01006904    GFXV01005898    MBW17703.1    KZ288226    PBC31908.1    KQ980724    KYN14148.1    ATLV01023137    KE525341    KFB48488.1    GANO01003402    JAB56469.1    ADMH02000324    ETN66964.1    GDHC01020539    JAP98089.1    KQ982021    KYN30411.1    GFDL01005276    JAV29769.1    AXCM01003944    GFDL01005543    JAV29502.1    GL448770    EFN83884.1    CH477855    EJY57974.1    CH954181    EDV49642.1    AE014297    AY069570    BT081960    AAF54519.1    AAL39715.1    ACO52091.1    CM000160    EDW96797.1    CM000364    EDX13498.1    CH902617    EDV41533.1    KQ434874    KZC09741.1    KQ976731    KYM76322.1    CH480815    EDW42743.1    CM000070    EAL27338.3    JXUM01152552    KQ571484    KXJ68165.1    KQ978397    KYM94211.1    CH479179    EDW23868.1    JRES01000501    KNC30675.1    GFDF01009279    JAV04805.1    OUUW01000013    SPP87700.1    GAMC01009466    JAB97089.1    UFQT01000670    SSX26347.1    KA646174    AFP60803.1    CH933806    EDW14005.1    NEVH01021189    PNF20130.1    KQ982892    KYQ49627.1    GBXI01010901    JAD03391.1    GDHF01019051    JAI33263.1    GAKP01013745    JAC45207.1    PNF20132.1    CCAG010000644    CCAG010000645    CH916369    EDV93106.1    CH964272    EDW85009.2    KRG00169.1    CVRI01000004    CRK87405.1    CH940650    EDW66559.1    CP012526    ALC47051.1    JXJN01013984    GFDF01009353    JAV04731.1    KRK03355.1    KRK03356.1    JRES01000375    KNC31850.1    GL887707    EGI70180.1    KQ414582    KOC70911.1    GGMS01004264    MBY73467.1   

Proteomes

UP000053240    UP000053268    UP000007151    UP000283053    UP000005204    UP000027135    + More
UP000215335    UP000079169    UP000002358    UP000002320    UP000005203    UP000053105    UP000007062    UP000076407    UP000075840    UP000075903    UP000075886    UP000075882    UP000005205    UP000075920    UP000242457    UP000078492    UP000030765    UP000075885    UP000075900    UP000069272    UP000000673    UP000075884    UP000075881    UP000075880    UP000078541    UP000075883    UP000008237    UP000008820    UP000008711    UP000000803    UP000192221    UP000002282    UP000000304    UP000007801    UP000076502    UP000078540    UP000001292    UP000001819    UP000069940    UP000249989    UP000078542    UP000008744    UP000037069    UP000268350    UP000095301    UP000095300    UP000009192    UP000235965    UP000075902    UP000075809    UP000075901    UP000092444    UP000001070    UP000078200    UP000007798    UP000183832    UP000008792    UP000092553    UP000092460    UP000091820    UP000007755    UP000092443    UP000053825    UP000076408    UP000092445   

PRIDE

H9J363    Q9VH02   

Pfam

PF00860   Xan_ur_permease        + More
PF17906   HTH_48
PF00653   BIR
PF00179   UQ_con
PF12356   BIRC6

Interpro

IPR006043   Xant/urac/vitC        + More
IPR006042   Xan_ur_permease       
IPR041426   Mos1_HTH       
IPR036322   WD40_repeat_dom_sf       
IPR022103   BIRC6       
IPR001370   BIR_rpt       
IPR000608   UBQ-conjugat_E2       
IPR016135   UBQ-conjugating_enzyme/RWD       

SUPFAM

SSF54495   SSF54495        + More
SSF50978   SSF50978       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc
cd00022  BIR

ProteinModelPortal

A0A2W1BNU3   A0A2H1VRE4   A0A194R4G0   A0A194QE44   A0A212FM19   A0A3S2TMB4   + More
S4NU22   H9J363   A0A310SHS1   A0A067QHL7   A0A1S4G4U5   A0A1Q3FPF9   A0A232EKA6   A0A1Q3FQ97   A0A1S4ESK3   A0A1B6LHR0   K7IQC0   A0A1S4ES56   A0A1S3DT63   B0WBR5   A0A023ETZ6   A0A088AJ02   A0A0N0U396   Q7PQS2   A0A182XE63   A0A182HJ60   A0A182UYW0   Q8MU86   A0A182QQN7   A0A182LCC8   A0A158P1W7   A0A182VXG1   A0A2H8TTW7   A0A2A3EJN5   A0A195DMP7   A0A084WE44   A0A182PAH0   A0A182R381   U5EQ67   A0A182FQB3   W5JVS4   A0A182NFS8   A0A182KF56   A0A182JHQ1   A0A146KT52   A0A195EQF7   A0A1Q3FQ88   A0A182MFJ0   A0A1Q3FPR7   E2BK87   J9HJC0   B3P1P3   Q9VH02   A0A1W4UL97   B4PKN8   B4QV92   B3LW00   A0A154PD37   A0A195AW94   B4HIU6   Q29AL1   A0A182G8R0   A0A151I7U3   B4G6A9   A0A0L0CEI9   A0A1L8DEJ7   A0A3B0KGY7   W8C4N8   A0A336MD77   T1PBW6   A0A1I8N899   A0A1I8P706   B4K534   A0A2J7PUZ0   A0A182TXI1   A0A151WP90   A0A0A1WXM8   A0A0K8V395   A0A034VT03   A0A2J7PUX2   A0A182SZ80   A0A1B0G976   B4JIM5   A0A1A9V938   B4NJP7   A0A0Q9WXK1   A0A1J1HHC5   B4LWC2   A0A0M4EQ45   A0A1B0BGS8   A0A1L8DE48   A0A0R1E272   A0A0L0CHX4   A0A1A9WLR9   F4W645   A0A1A9Y8Z0   A0A0L7RJK9   A0A182XWU4   A0A2S2Q6X2   A0A1A9ZRP4  

PDB

5XLS     E-value=5.66075e-12,     Score=173

KEGG

101744938    K14611 solute carrier family 23 (nucleobase transporter), member 1/2 | (RefSeq) solute carrier famil

GO

GO:0022857   GO:0016021   GO:0016020   GO:0004842   GO:0032465   GO:0006915   GO:0005215   GO:0006810   GO:0016491   GO:0000166   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824   GO:0055085  

Length:

578

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

238.27902

Exp number, first 60 AAs:

11.48657

Total prob of N-in:

0.22454

POSSIBLE N-term signal

sequence

outside

1  -  49

TMhelix

50  -  72

inside

73  -  83

TMhelix

84  -  103

outside

104  -  106

TMhelix

107  -  129

inside

130  -  153

TMhelix

154  -  176

outside

177  -  210

TMhelix

211  -  233

inside

234  -  253

TMhelix

254  -  276

outside

277  -  305

TMhelix

306  -  328

inside

329  -  396

TMhelix

397  -  419

outside

420  -  422

TMhelix

423  -  445

inside

446  -  451

TMhelix

452  -  471

outside

472  -  485

TMhelix

486  -  505

inside

506  -  578

 

 

Pi

234.958055

Theta

166.496041

Tajima's D

1.440297

CLR

0.0793

CSRT

0.766961651917404

Interpretation

Uncertain