SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10610
Pre Gene Modal
BGIBMGA003952
Annotation
PREDICTED:_uncharacterized_protein_LOC101746563_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.079
 

Sequence

CDS
ATGCTCCAGTCTTTACTACAACCGAGAGAAAATCAGCGATCCAAGATGATCGGCGCGATGCCAGCAGTGGCCGTGCGGCATGAACGCCGGCGCAATGAGAAGAGGGGCGGAGGCGCCGTGGGGCGGCGGCCCTCGCAGCTGCCCTTGCAGCTCGGACGAGCCCCGGACGTGGACCCGACGCCCTCGCCAGTGCACCATCGACTGAGGAACGAGCTCTACGTATGCGGCAAGGTGGCAGCTCTTCACGCTGTCGTAGGCTTACTACTCCTCGGTATCGTGGTACTGGTGGTGGGACTGGTACAACTGTCGCCTGGTGCGGAGGCTGCTCAGCATCGATACTATTTGATGGGAGCAGGCGGCGCAATGGTAGGGGCGGGCGTTCTAGGAGCTGTGTTAAGATACGTATGCCTTCACTGGTACAACCGCAAGTTCCAAGAGGAGGACCCTGAGCAGCCGGAGCCGGCCGGCCACAAGAACGGCGTGAGCGTGGTCGACAACCACCCCGACAAACACGACAAGCACGAGAAGAAACTGAAGACCCAGGTCAGCGTGAGTCGCGACATAGACCTCATGAAGCAGCAGTCCGCTGCAAGCGATGCTTAA
Protein
MLQSLLQPRENQRSKMIGAMPAVAVRHERRRNEKRGGGAVGRRPSQLPLQLGRAPDVDPTPSPVHHRLRNELYVCGKVAALHAVVGLLLLGIVVLVVGLVQLSPGAEAAQHRYYLMGAGGAMVGAGVLGAVLRYVCLHWYNRKFQEEDPEQPEPAGHKNGVSVVDNHPDKHDKHEKKLKTQVSVSRDIDLMKQQSAASDA

Summary

Ontologies

Topology

Length:
200
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.43718
Exp number, first 60 AAs:
0.00063
Total prob of N-in:
0.91895
inside
1  -  77
TMhelix
78  -  100
outside
101  -  114
TMhelix
115  -  137
inside
138  -  200
 
 

Population Genetic Test Statistics

Pi
285.419765
Theta
173.678386
Tajima's D
1.373263
CLR
230.842821
CSRT
0.763711814409279
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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