Silkworm Genome Informatics Database

Gene

KWMTBOMO10606

Pre Gene Modal

BGIBMGA003928

Annotation

PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]

Location

Bomo_Chr17(-):15577525-15583997 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.264

CDS

ATGTCCATGGAGAGTATGATGGTGGGAGGCGTTGGCGTAGGAGGCATGACACCAGTGAGCAGTGGCGTGTCCTCCATGGGGGGCTTCCAGCTGGTCCGGGAACCAACATCGGGAGCTTGGCTCTTACTACCAGCTCCACCCGACCTCCCTCATGCAGTGGTGTGGGGCGGCATGCCGTATCCATCGGCACCTTTGTTGCTACCCCATGCGCCACATCCGTCACATCACCTGCAGATTCTTCCAGGAGACATTCTCGCCTCCACAGCCACTTTGCAGCATACACACACACATTCTACTCGACTGGTGACTTTGGCCCCAGCCCCGGCCCCACAGCCGCATCCAGCGCACCAGGAAAAACGTAAATCCATTTTACAGCCGATCATCACGCCACACTTGATCAAATTAGAGCCAGAGCCACCCCAGGAGAAACCCCAGCCGACGTTTGCCCCGGAACCGGTTCAACAACCTATGCTAACGACTCACGTGTTTTACCAGCCAGACTTCTCGGAACAGGCGTGCAGGAGCCAGGCCACGTCACCAGCCGCTCCGCCCACTCCACCACCGGAAGCTTCAGAAGCTCCAGTCCAGAAAGATGCTTCCAACCAAACTGATCACATCGATGACGATGATGATTCTCCCAACCACGCCGATGAAGATGAGCGCGATATTGCTTGTGTTGGCGTGGCTCACTTTCCAGAGGATTCCGAATCCCAGAGCTCTCCGCAGATATTAGTACCATCGATTGATAGCGCCGAAGAGTCTTCTTCCGAAGGTCTGACTAATTCAGTTATGGTAGGCGCCGTAGAAAAGGCAATCGATGCGATCGAGAGAGATGACACGATGGACAATTTGAGCAGTGGAGGCTCTACTAATGAGCTGGTGATAGACACTGCGAGAGCCACTCCTGTACCACAAGTGACGCCCCAAAGCGCGAGGCCACCTGTGGACCTTAGTGGATTAGAACTTCTTTCAAACAGCATTGAACAATTTGAAAGGACAACTCCCGGCACAAGCATGCCTTCCTTAGAGCCGGTCCCGTTGACCGTTGATACGAGACCAACATCAAAACTTAACATCATGATTAAAACTTCACCGAAATCTCCTCCCAGGACTGAAGCAGAACCGCACAGAAGATTTGAGTTCCCACCAGCTGATCCTTGCAATGCTGAACCCGCAAAGCCTGCCCTCGGCGGCTTAGGGTTATTGTGTGCATTAGCGGAACAGAGATTCATGGAAGAGGTCGAAGAAAGTCCACAAAATAATCTGTCCATATCTTCCCGTCCGTTCGTTAAGAATGAACCTTTACACAGTCCTGCTGTGAGAGACAGAGATAGACACAGGGAATACGATATACAAGCCCAATCCTCGAGTAAAAAAGAAAAGCATAGGCATAGAGATCGAGATTCGTCTAGTGAAAGAAGAAGAAAAAAGAGTCATGACAGAGAAGAACGCTTACGGCATAAATTACAGAAGATGCGTCGGCATAAACGTGAAAGAGAAAGAGACGAAGCTAGACATAGTGGGGGAGAGTTGGAGACGAGCCTCCGACGAGTCACGTCTTGTTCATGCGGCTCTGTAAGTTGTTCTCATGCCCAAACATTGCCGACGTGTCACGCCCTTGTCAATGCGATAGAAAAAGATATGAGAGAAAGATTACAAGAACTTCAGAGGCAGTTCGATGAAAAGAAAGCTCAGATTGACGCCCTCTCTCCAGCTTTGCCGGCCTCTTCTAATTCTACAGCGCCGTCTACGCCCGCGTTATCCCCAGATTCAGACAGGGGCTCATCAAAGAAGCGAAAAGTTGGTAGACCCCGAAAGGTTTCGAGCCCCGATTCCACTGAAACTATCGTGGCAAAGAAACCCAAATCTAAAAGCAGCCTCGTCGGGTACCTGCTTGCGAAACAAAAATTAAAAGGAGGTATTCTATGCACCAGAGGCGAACCTTCAAGAGAGGAACTAAACCGAACTAGCAAAGTTCGCCCGAAATTAAAGGCCGAACCAATTTTGAAGATACGTTCGGAGGAAGAGGAAACAGAATATGGTCTCAGTCGTTCCACTAGCTCTTCGATGGAGAGCCTCAATGAAGTTCGGGCCAAAAACCGAGAAAAAGTCGATAAATTAGCACGCAAGCACTCCAGAGACGACCTATCAGAACTAGAGTTCGCGATACGGCGTGCTAGTGCATCCAGTGAAAGCGACAAAGACAGACGTCGCGAGAAAAAACGACGAAAGAGCTCGAAATCAAAAGACACGACCGACGAATGCGAAGTAAATAATCCTTCAAAAGATCCTACACCACCGGTCGTGTCTAAATGTACTCTCACTGAGGATAAGTTGGACTCAAATCCACGAGTGCTCACGGCCATGGGAGGACTGTTTTACGCGGGAAAGCTAAGTGCAGTGCAAGCGCCAGATGTGTACGCCATCACACTGGACGGAGAGAGGGGGAATAAACCACACATACTGTCCCGAGAGGAGACTCTGCGAGATGCTATTTTAGAAGTAAGTCCAGTATCGGTATCGGAGCTTCCATCAGGTGCCCGAGTGTGCGCCTACTGGTCGCAGCAGTACCGGTGTCTGTACCCTGGTACTGTGGCCGTCTCCTCGCCAGACCCTCACGATGATAAATTCGTGGCTGTAGAATTCGACGATGGAGACTCCGGCAGAATAGCCATTGAGGATATAAGATTTTTGGAACCGAATTATCCTGTCGTTGAATACGAAAACCCACTATTCACCCTTGGCAAGCGTAGACGTAACACCAGTGCCAGTGGAGAAGACAAGAAGCCTTCTGAAATAAAACCTTCAACTTCGGACCAAAAACCAGCTACGGAACAGGAAAGACACAAAGACAGGAAAAAACTAAAGAAACATCGAAAAGAGAAGCTGAAGAGGCACTCCAGCGAAGACGACCCCAACGAATACGTCAAGAAGAAGAAGAAAAAGCACAAATGCTGCGAAGAGCACTGCAAGCACAAGAAGCACCATAAGAAACATAGAAAACACAGGAAGAGGCATCATTCCAGCTGCAAAGAGCAATCCAGCTCATCGGGAGAGGACATCAAGAAGTCTTCCTCAGAATACGTCGACTCTAACAAGTCCAACGAAGACTCTGGAGACTCTAATGACAAACTGTCAACGCTCATAGCGATAGAGAAGTCCCCAGAGGAAATGAAAACTGTTATCAAGAAGACCGTGCTGTCGAAGAAGTCTTTGGTGAAAAGCGCAGTGTTGGACTTCAGTAACATCGGGAAATCGGCGCTGAAGAGAGACGAGGCTCCGGATAACCTGAAGGATAGCGGGATCGGCATGGAAGACGAGCCGACGGCGTCCACCAGTGATGCTTCCAAGAAGAAGACGAAGCGTCGCACGGTGTCGGGCTCGTCGGAGGGCGCGGGGGCGGGCGGCGCGGTGGGCGGGGTGAGCAAGATGGCGGCGTTCCTGCCCGGCGGCGCGCTGTGGCGCTGGCGGGGGCCCGCCTACCGCAGGACGGCCCGCCCGCGACACAAGAAGCTCTTCTACAAGGCCATCCAGCGGGGCGAGGAAATATTAAATGTTGGAGAGTCGGCGGTGTTCCTGTCGACAGGCCGCGCCGACCGGCCCTACATCGGCAGAGTCCTGGCGCTCTGGCAGGCTCGAGGGGCGATGGCCGTCAGAGTCGCCTGGTTCTACCACCCTGAGGAGACTCCTCTATGTACACAAACCCTCCAGTATCCAGGCGGATTGTTCGAATCCCCGCACACAGATGAGAACGATGTTCAGACGATTTCTCATAAATGTGAGGTGCTGCCGCTTGCTCAGTACCAGGAGCGCATGGGCGACGACCCGGTCAAGTACAGCACGGTTTACGACAACAATGACGTTTACTACTTGGCCGGTCACTACGACCCCACGCAGCAGACTTTGAGAATGGAACCGGACATTCCGTTTGCGAATCCATCCACCTCCTAG

Protein

MSMESMMVGGVGVGGMTPVSSGVSSMGGFQLVREPTSGAWLLLPAPPDLPHAVVWGGMPYPSAPLLLPHAPHPSHHLQILPGDILASTATLQHTHTHSTRLVTLAPAPAPQPHPAHQEKRKSILQPIITPHLIKLEPEPPQEKPQPTFAPEPVQQPMLTTHVFYQPDFSEQACRSQATSPAAPPTPPPEASEAPVQKDASNQTDHIDDDDDSPNHADEDERDIACVGVAHFPEDSESQSSPQILVPSIDSAEESSSEGLTNSVMVGAVEKAIDAIERDDTMDNLSSGGSTNELVIDTARATPVPQVTPQSARPPVDLSGLELLSNSIEQFERTTPGTSMPSLEPVPLTVDTRPTSKLNIMIKTSPKSPPRTEAEPHRRFEFPPADPCNAEPAKPALGGLGLLCALAEQRFMEEVEESPQNNLSISSRPFVKNEPLHSPAVRDRDRHREYDIQAQSSSKKEKHRHRDRDSSSERRRKKSHDREERLRHKLQKMRRHKRERERDEARHSGGELETSLRRVTSCSCGSVSCSHAQTLPTCHALVNAIEKDMRERLQELQRQFDEKKAQIDALSPALPASSNSTAPSTPALSPDSDRGSSKKRKVGRPRKVSSPDSTETIVAKKPKSKSSLVGYLLAKQKLKGGILCTRGEPSREELNRTSKVRPKLKAEPILKIRSEEEETEYGLSRSTSSSMESLNEVRAKNREKVDKLARKHSRDDLSELEFAIRRASASSESDKDRRREKKRRKSSKSKDTTDECEVNNPSKDPTPPVVSKCTLTEDKLDSNPRVLTAMGGLFYAGKLSAVQAPDVYAITLDGERGNKPHILSREETLRDAILEVSPVSVSELPSGARVCAYWSQQYRCLYPGTVAVSSPDPHDDKFVAVEFDDGDSGRIAIEDIRFLEPNYPVVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPATEQERHKDRKKLKKHRKEKLKRHSSEDDPNEYVKKKKKKHKCCEEHCKHKKHHKKHRKHRKRHHSSCKEQSSSSGEDIKKSSSEYVDSNKSNEDSGDSNDKLSTLIAIEKSPEEMKTVIKKTVLSKKSLVKSAVLDFSNIGKSALKRDEAPDNLKDSGIGMEDEPTASTSDASKKKTKRRTVSGSSEGAGAGGAVGGVSKMAAFLPGGALWRWRGPAYRRTARPRHKKLFYKAIQRGEEILNVGESAVFLSTGRADRPYIGRVLALWQARGAMAVRVAWFYHPEETPLCTQTLQYPGGLFESPHTDENDVQTISHKCEVLPLAQYQERMGDDPVKYSTVYDNNDVYYLAGHYDPTQQTLRMEPDIPFANPSTS

Uniprot

H9J341 A0A2H1V3R3 A0A194R4G6 A0A0N0PA34 A0A2A4J6Y5 A0A212ERD6 + More
A0A0L7LBA9

Pubmed

19121390 26354079 22118469 26227816

EMBL

BABH01042237 ODYU01000543 SOQ35480.1 KQ460779 KPJ12414.1 KQ459169 + More
KPJ03409.1 NWSH01002668 PCG67721.1 AGBW02013066 OWR44029.1 JTDY01001872 KOB72669.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000218220 UP000007151 UP000037510 + More

PRIDE

H9J341

Pfam

PF01426 BAH

Interpro

IPR001025 BAH_dom + More
IPR029616 Wge

ProteinModelPortal

H9J341 A0A2H1V3R3 A0A194R4G6 A0A0N0PA34 A0A2A4J6Y5 A0A212ERD6 + More
A0A0L7LBA9

PDB

5Z8L E-value=0.0284322, Score=93

KEGG

101744155 no KO assigned | (RefSeq) protein winged eye

GO

GO:0030154 GO:0003682 GO:0050660 GO:0050661 GO:0016491 GO:0000166 GO:0003906 GO:0005634 GO:0006285 GO:0019104 GO:0003824

PANTHER

PTHR12505:SF24

Length:

1316

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.75956

Exp number, first 60 AAs:

1.47046

Total prob of N-in:

0.06556

outside

1 - 1316

Pi

210.065514

Theta

181.505593

Tajima's D

0.462876

CLR

0.079575

CSRT

0.503724813759312

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics