SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10604
Annotation
PREDICTED:_sodium-independent_sulfate_anion_transporter-like_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.966
 

Sequence

CDS
ATGGACCTCAACGATCCAAGACGCCCTTTATTGGGGGAACCCTCAAGGGGCCGGTTAAGGAAAACAGCGGCAAAGTTTTGCGGCCTGGGCTCGTGGAAGATAAGACTTCCAATCACGATATGGCTTCCACGTTATACATTGGAATCTCTGTTTAGGGATCTTATTGCCGGTATAACGGTCGGCCTCACGTCAATACCTCAAGGCATTGCCTACGCAATGATCGCTGGCCTACCCCCGCAAATCGGTCTGTATTCCAGTATATTCCCGGGCATAGTCTACAGTTTATTTGGAAGCTGCAAGGACATTACCCTGGGCCCGACCGCCATATTATCGGCTCTCGTCGCTAAGTACGTAGCGTACTCCGACGATTTCGCATATTTGGCCTCGTTCTTGTCCGGGTGTATAGTCCTACTGTTTGGAATTTTACAACTGGGATTCATATTAGATTTCATATCAAAGCCGGTGATAGCGGGCTTCACAACGGCCGCGGCGCTTCAAATCGGAGCATCCCAGCTGAGATCCCTGTTTGGAGTTTCTGGCTCCTCGGGCAATACGTTCGTGAAGGCCATCATTAACTTCTTCAGAAACATCACAACGATTCAGCTAAATGACTCTTTGCTGGGCGTGGTCACGATAATATCATTAATGCTGTTGAAGCACGCGACGATTCCGGTGGGTCCGGACTCATCTTCGTGCCGGGTCCGGTTCGCCAAGCTCTGGGTGTACGTGCTGAGGGCTAGGAACGCTTTGGTCGTGTTTGTCGGTTCCATCCTCGCCTACATCCTGTACGTGCAAGGCTGGACGCCCTTCGCATTGACAGGTAAAATAAATGGAGGTCTGCCCCATTTCGGGCCCCCCCCCTTCAGTACCGTGGTCGGGAACCGAACTCTGAACTTCACGGACATGCTGGCTGTGTTCGGAGCGGAGGGCCTGGTGATGCCCTTGGTCACTATATTAGAGAGCGTCGCCATTGCCAAAGCATTTGCTGGGTCCAAGCCCGTGGACGGCACGCAGGAGATGATAGCGCTGGGGGCCTGCAACATTCTGTCGTGCTTCGGTCAGAGCATGCCGACCACGGGCTCCTTCACGCGCACCGCTATCAACCATGCCTGCGGCGTCACCACCCCCGCGGGATCCCTGTTCAAAGCGTGTCTCGTCCTCCTCGCGGTGACTCTGTTAACGGACGCGTTCTTCTTCATCCCGAAAACGGTCCTAGCCGGGATCATCATCGTGGCCATGACCTCCATCACGGAATTCGGTCTCGTGACGAAATTGTGGAGGAACAGCAAGCTGGAGCTGGCGGTGTACTCGCTGACGGTGCTGGTGGGGGCGGGCGTGGGGCTGGAGTACGGCATCCTGTGCGGGGCGGGGCTGGACGTGGCCAGGACGCTGGCGCACGCCGCCCGCCCCGACCTGCACCATCAACTCTTCAAGGTCGGCAACCAGGACTGCATAATTCTGACGTTGCTGGGCACGCTGACGTACGCGTGCTGCGAGCACGTGCCGCGTCAGCTGCGCCGGCGCGCGGGCGAGCACGTGCACGTGGCGGTGCTGGACGCGCGGCACGTGCAGCGCCTCGACTACGGAAGTCGAGTTCGACTACGGAGGATTTCTTAA
Protein
MDLNDPRRPLLGEPSRGRLRKTAAKFCGLGSWKIRLPITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYVAYSDDFAYLASFLSGCIVLLFGILQLGFILDFISKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAIINFFRNITTIQLNDSLLGVVTIISLMLLKHATIPVGPDSSSCRVRFAKLWVYVLRARNALVVFVGSILAYILYVQGWTPFALTGKINGGLPHFGPPPFSTVVGNRTLNFTDMLAVFGAEGLVMPLVTILESVAIAKAFAGSKPVDGTQEMIALGACNILSCFGQSMPTTGSFTRTAINHACGVTTPAGSLFKACLVLLAVTLLTDAFFFIPKTVLAGIIIVAMTSITEFGLVTKLWRNSKLELAVYSLTVLVGAGVGLEYGILCGAGLDVARTLAHAARPDLHHQLFKVGNQDCIILTLLGTLTYACCEHVPRQLRRRAGEHVHVAVLDARHVQRLDYGSRVRLRRIS

Summary

Similarity
Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
EMBL
ODYU01000543    SOQ35478.1    KZ150001    PZC75311.1    NWSH01004247    PCG65307.1    + More
KQ459169    KPJ03413.1    AGBW02011189    OWR47081.1    JTDY01007741    KOB64973.1    KQ460779    KPJ12417.1    AGBW02013066    OWR44026.1    KQ459472    KPJ00123.1    KQ461175    KPJ07949.1    JTDY01000476    KOB77005.1    GFDF01009352    JAV04732.1    GFDF01009351    JAV04733.1    ODYU01006956    SOQ49277.1    GBGD01000935    JAC87954.1    GFTR01007336    JAW09090.1    BABH01019037    GECL01002483    JAP03641.1    GFDL01008117    JAV26928.1    GEZM01058160    JAV71860.1    DS231819    EDS42809.1    GEZM01058159    JAV71861.1    NWSH01007697    PCG62852.1    GL451937    EFN78210.1    GAKP01012778    JAC46174.1    GAKP01012779    JAC46173.1    GAKP01012777    JAC46175.1    GDHF01005381    JAI46933.1    GDHF01031514    JAI20800.1    GDHF01015006    JAI37308.1    GL439905    EFN66636.1    CH477832    EAT35825.1    JXUM01047217    JXUM01047218    KQ561510    KXJ78346.1    JXUM01049949    JXUM01049950    GAMC01006375    JAC00181.1    GAMC01006376    JAC00180.1    GAPW01000485    JAC13113.1    ACPB03014185    GDKW01002824    JAI53771.1    OUUW01000001    SPP74903.1    NNAY01002700    OXU20749.1    ADMH02000728    ETN65234.1    GFDL01008179    JAV26866.1    CH963849    EDW74635.1    CH933808    EDW09310.1    AAZX01001196    AAZX01010281    GECU01037002    JAS70704.1    CH479183    EDW35447.1    GECU01031114    GECU01026481    JAS76592.1    JAS81225.1    CH940648    EDW61791.2    CM000071    EDY69428.1    GDHC01003476    JAQ15153.1    CVRI01000064    CRL05406.1    GDHC01006325    JAQ12304.1    ATLV01021319    KE525316    KFB46321.1    GECZ01025058    GECZ01004421    JAS44711.1    JAS65348.1    GECZ01021069    GECZ01006625    JAS48700.1    JAS63144.1    GGFK01010181    MBW43502.1    NNAY01003020    OXU20106.1    NEVH01000254    PNF43821.1    KFB46322.1    CH916367    EDW02497.1    GL434761    EFN74604.1    JXJN01004199    KZ288400    PBC26293.1    PNF43808.1    UFQS01000397    UFQT01000397    SSX03619.1    SSX23984.1    AE013599    AY051897    AY240021    AAF57797.1    AAK93321.1    AAP57522.1    KQ760116    OAD61937.1    LJIG01002933    KRT84007.1    PNF43806.1    CM000362    CM002911    EDX07563.1    KMY94675.1    JRES01000835    KNC27930.1    KK854946    PTY19868.1    KZ288204    PBC33308.1    AAAB01008952    CM000158    EDW91741.1    CH480816    EDW48355.1    CH954179    EDV54971.1    CH902619    EDV36975.1    UFQS01001780    UFQT01001780    SSX12330.1    SSX31781.1    UFQS01004118    UFQT01004118    SSX16183.1    SSX35509.1    GL888147    EGI66552.1   
Pfam
PF00916   Sulfate_transp        + More
PF01740   STAS
PF09733   VEFS-Box
PF13476   AAA_23
PF15430   SVWC
PF06470   SMC_hinge
Interpro
IPR036513   STAS_dom_sf        + More
IPR011547   SLC26A/SulP_dom       
IPR001902   SLC26A/SulP_fam       
IPR002645   STAS_dom       
IPR029277   SVWC_dom       
IPR019135   Polycomb_protein_VEFS-Box       
IPR010935   SMC_hinge       
IPR037516   Tripartite_DENN       
IPR027417   P-loop_NTPase       
IPR038729   Rad50/SbcC_AAA       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF52091   SSF52091        + More
SSF52540   SSF52540       
Gene 3D
PDB
5DA0     E-value=3.14311e-08,     Score=140

Ontologies

Topology

Subcellular location
Membrane  
Length:
538
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
206.60701
Exp number, first 60 AAs:
6.54072
Total prob of N-in:
0.88695
inside
1  -  53
TMhelix
54  -  76
outside
77  -  90
TMhelix
91  -  113
inside
114  -  124
TMhelix
125  -  147
outside
148  -  204
TMhelix
205  -  227
inside
228  -  247
TMhelix
248  -  270
outside
271  -  301
TMhelix
302  -  324
inside
325  -  377
TMhelix
378  -  400
outside
401  -  403
TMhelix
404  -  426
inside
427  -  432
TMhelix
433  -  455
outside
456  -  538
 
 

Population Genetic Test Statistics

Pi
286.166242
Theta
167.857319
Tajima's D
2.822743
CLR
0.147935
CSRT
0.968301584920754
Interpretation
Uncertain
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