SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10601
Pre Gene Modal
BGIBMGA003906
Annotation
PREDICTED:_uncharacterized_protein_LOC105841693_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.789
 

Sequence

CDS
ATGTTGCACTTATTGAGATTATTAATATTGGTAGTAAGCCACGAGATGGTGTTAGGCTCAGATTTGCCGCCAATAGAAGCAGAGCACTACCCATATGGAGCTTCACCAGCGAAATCTAGATATATCAACGGCACGACCTACCAGGTGCCAGAGCCATATGAGAGTCCAGACTATAGATACGAGGAACCTCCATTTGTAGCCCATTCCCACACCTTCTACAAGGAAGAAGAAAGACCCTATCGATTCTCACCACACTATAAAGCGTATTACAGATTCATAAAGAGCTATAATTGGTTTGGAAAGAAAGTTTTGGAGCGTCCCTGGACCGTAGGATGCTATTGTACGACAGTCTACAAAAGACTAACGCCGCTTGCTGGCTGTGCAGTCATAACCACAAGACACATCCTCACAAGTGCCACGGCCACCGAACTGGTCCTCAAAGACCACCGACACGAAAAAAGCCTGGAGAATATACTGGGGGCCTGGTACGACGTCGACGAGAACGTTTACAATAGTTCAATGTATATGACTCCAGCTAGGATCCACTATCATCCAAGATACATGCGTCCAAATATGGTCAACGTTACTCATCCGTTTGCGATCGTGTACGATTTAGCCGTTTGGGCAGCCACTTACCGTTTCTACGGCAGTATGTGGACTCTAGGACATGCAGTTATATGTGACAGAGCTAGTTCTGGATGGTTCGAATATTCATCCCCGACTCCTAAGTTTCGCGAGCTCGCCTTCATTGTCGGCTTTCAATATATGAAAGCTTGGAGACGTGTGCCGATGCCTTGGTTCAAGTATGTCATCCGAACTAGACGACATTGGCCCATTTGTCCGAAAACTGATTGGAGCTGGTATATCTGCGTCCAAGCGTACTGGGCCAAATGTGGAATAGAATCAGGTGCCGCGTGGCATCGCGAATTGGAGGGCTATGGATGGAGATATAACGGCCTTCTCGGGCTTTGCGCTATTGCCATGAAACTCAGATCCAAAGACATTGTGGGTTACTTTGCAGTACTCGACACCCACCCAGTACTGGATTTCTTATATGCATCTTACATGGGATGGCAGCCGTACGAGTTTTTAGACTACAGATTTTACAATTCCCAGGGCCGAGCGCCGGTCGTGAAACCTTGGTTCTACTTGCCTTGGACATATGACTTCGGTGTCGAGCTGTACAGATCATATGTTTTACCGTATTACAAATAA
Protein
MLHLLRLLILVVSHEMVLGSDLPPIEAEHYPYGASPAKSRYINGTTYQVPEPYESPDYRYEEPPFVAHSHTFYKEEERPYRFSPHYKAYYRFIKSYNWFGKKVLERPWTVGCYCTTVYKRLTPLAGCAVITTRHILTSATATELVLKDHRHEKSLENILGAWYDVDENVYNSSMYMTPARIHYHPRYMRPNMVNVTHPFAIVYDLAVWAATYRFYGSMWTLGHAVICDRASSGWFEYSSPTPKFRELAFIVGFQYMKAWRRVPMPWFKYVIRTRRHWPICPKTDWSWYICVQAYWAKCGIESGAAWHRELEGYGWRYNGLLGLCAIAMKLRSKDIVGYFAVLDTHPVLDFLYASYMGWQPYEFLDYRFYNSQGRAPVVKPWFYLPWTYDFGVELYRSYVLPYYK

Summary

Interpro
IPR009003   Peptidase_S1_PA        + More
IPR011990   TPR-like_helical_dom_sf       
IPR026209   Wolframin_fam       
SUPFAM
SSF50494   SSF50494       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.973562
 
 
Length:
404
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.49412
Exp number, first 60 AAs:
0.0027
Total prob of N-in:
0.01077
outside
1  -  404
 
 

Population Genetic Test Statistics

Pi
132.588842
Theta
128.873085
Tajima's D
0.143912
CLR
0.263844
CSRT
0.404079796010199
Interpretation
Uncertain
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