Gene

KWMTBOMO10596  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003924

Annotation

NADH_dehydrogenase_ubiquinone_Fe-S_8_[Bombyx_mori]

Location

Bomo_Chr17(+):14962917-14966610      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.22 Mitochondrial   Reliability : 1.519

CDS

ATGTCTTTAGCAAAGATATTTTCAGTCTCATCACGAGTACGAGCATCAGGAGTTAGTGGTGTGATAGTGAAACGGGCACAGTACAGCTCATCATCAGAAGGAAATGTTGAGAAGGTTTACCCACAGAACATACCTGGATATAAATATGTGAATGCAGAGGAACAAGACATGTCTTTCAGGGCTATGTCAGATAGAGCAGCTCAGACAATGTTCTGGACTGAGTTAGCCCGAGGATTTGCTGTTACTTTGGCTCATATTTTCAAGGAACCAGCAACAATCAACTATCCATTTGAGAAAGGGCCACTGTCGCCTCGGTTCAGAGGTGAACATGCTCTACGTCGCTACCCTTCAGGAGAAGAAAGGTGCATTGCTTGTAAGCTGTGCGAAGCCATTTGTCCAGCACAGGCTATCACGATTGAAGCAGAAGAGCGTAAGGACGGTTCGAGGCGAACCACTCGATACGATATTGACATGACAAAGTGTATCTATTGTGGCTTCTGTCAAGAAGCCTGTCCGGTTGATGCAATCGTGGAAGGTCCGAATTTCGAGTTTTCAACAGAGACACATGAGGAACTTTTATACAATAAGGAGAAACTTCTGTCGAACGGCGATAAATGGGAGAGTGAGATCGCATCCAATATCAGAGCTGATCATTTGTACCGTTGA

Protein

MSLAKIFSVSSRVRASGVSGVIVKRAQYSSSSEGNVEKVYPQNIPGYKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIASNIRADHLYR

Uniprot

H9J337   Q2F5Y0   W8RHF1   A0A2H1VBZ2   A0A2Z5U807   A0A2A4ISM1   + More
A0A2A4J7G0   A0A2W1C0Y9   S4PAC4   I4DKW2   A0A194RJE2   A0A1J1IQG3   A0A0K8TU16   A0A194PIC3   A0A067RHY4   A0A0L0BYH1   U5ESC7   A0A182TPE2   A0A182WSS7   Q7PY23   A0A182HLN0   N6U1N8   B3M382   A0A1W4VPN6   A0A182VHH3   A0A182LA26   A0A1L8EEK7   A0A084VI17   A0A1L8EEU9   A0A182ISY7   A0A182PSJ4   T1PBZ4   B4JFD3   A0A336M510   A0A182Q7R0   A0A1B6E2N4   A0A1I8PSN7   Q9VF27   W5JHJ7   A0A182VZL5   A0A182F7H2   A0A2M4AGW0   T1E7Z7   A0A1Q3FMP0   A0A182MT34   B4PRK1   B3P3W0   A0A182K3Z2   A0A2M3ZH95   A0A182RZM1   A0A182NRU3   A0A182SY40   B4HLH6   B4QXU2   A0A182Y3S4   A0A1A9VF20   D3TSE8   A0A1A9X9K7   A0A1A9ZAC5   A0A2M4C093   A0A3B0K864   B4NK63   B4K671   B8XY14   B0XGQ7   B4M4C4   Q8SZF2   A0A182GU90   A0A1A9WJT8   A0A1L8E0X3   A0A1L8E0U2   A0A0M4F2Y7   T1DF04   A0A3R7Q635   Q296Q6   B4GEU4   A0A0A9XJB4   W4ZCC6   W8BIT9   A0A1S3FIX5   A0A3B3T2E0   A0A3B3T1Y0   A0A224XT39   A0A0N8ERX8   A0A3M0JB02   A0A2P8Z4D3   A0A0K8UB25   D2A6A7   A0A034WWU5   A0A1B0CUQ8   A0A2R7X4E7   H0X8L5   K7FDZ8   A0A1U7SN14   L5KR57   A0A3B5KL55   G1PX98   U3JEL5   A0A0P4VTL7   A0A2Y9JST0  

Pubmed

19121390    28756777    23622113    22651552    26354079    26369729    + More
24845553    26108605    12364791    14747013    17210077    23537049    17994087    20966253    24438588    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    17550304    25244985    20353571    26483478    24330624    15632085    25401762    26823975    24495485    29240929    26999592    29403074    18362917    19820115    25348373    17381049    23258410    21551351    21993624    27129103   

EMBL

BABH01037666    DQ311293    ABD36237.1    KF994921    AHL83460.1    ODYU01001747    + More
SOQ38370.1    AP017481    BBB06730.1    NWSH01008167    PCG62669.1    NWSH01002881    PCG67380.1    KZ149921    PZC77743.1    GAIX01003319    JAA89241.1    AK401930    BAM18552.1    KQ460124    KPJ17672.1    CVRI01000057    CRL02455.1    GDAI01000153    JAI17450.1    KQ459603    KPI93161.1    KK852622    KDR19989.1    JRES01001243    KNC24319.1    GANO01003304    JAB56567.1    AAAB01008987    EAA00878.5    APCN01000909    APGK01052815    KB741216    ENN72467.1    CH902617    EDV43543.1    GFDG01001683    JAV17116.1    ATLV01013258    KE524848    KFB37611.1    GFDG01001680    JAV17119.1    KA645463    AFP60092.1    CH916369    EDV93414.1    UFQS01000118    UFQS01000448    UFQT01000118    UFQT01000448    SSX00003.1    SSX24441.1    AXCN02000249    GEDC01005144    JAS32154.1    AE014297    AY060840    AAF55234.1    AAL28388.1    ADMH02001371    ETN62783.1    GGFK01006631    MBW39952.1    GAMD01003193    JAA98397.1    GFDL01006165    JAV28880.1    AXCM01000026    CM000160    EDW97401.1    CH954181    EDV49066.1    GGFM01007186    MBW27937.1    CH480815    EDW41996.1    CM000364    EDX12766.1    CCAG010018011    EZ424350    ADD20626.1    GGFJ01009257    MBW58398.1    OUUW01000008    SPP84270.1    CH964272    EDW85105.1    CH933806    EDW14121.1    FJ458415    ACL37997.1    DS233057    EDS27780.1    CH940652    EDW59485.1    AY070919    AAL48541.1    JXUM01088820    KQ563727    KXJ73432.1    GFDF01001737    JAV12347.1    GFDF01001736    JAV12348.1    CP012526    ALC45875.1    GALA01000847    JAA94005.1    QCYY01002555    ROT69533.1    CM000070    EAL28402.1    CH479182    EDW34129.1    GBHO01023878    GBRD01003270    GDHC01014087    JAG19726.1    JAG62551.1    JAQ04542.1    AAGJ04014667    GAMC01005337    GAMC01005335    GAMC01005331    JAC01221.1    GFTR01003438    JAW12988.1    GDUN01001026    JAN94893.1    QRBI01000154    RMB98004.1    PYGN01000201    PSN51354.1    GDHF01028541    GDHF01012347    JAI23773.1    JAI39967.1    KQ971347    EFA05672.1    GAKP01000709    JAC58243.1    AJWK01029612    KK857004    PTY26677.1    AAQR03144673    AAQR03144674    AGCU01053696    KB030625    ELK13253.1    AAPE02044961    AGTO01011088    GDKW01000634    JAI55961.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000183832    UP000053268    UP000027135    + More
UP000037069    UP000075902    UP000076407    UP000007062    UP000075840    UP000019118    UP000007801    UP000192221    UP000075903    UP000075882    UP000030765    UP000075880    UP000075885    UP000095301    UP000001070    UP000075886    UP000095300    UP000000803    UP000000673    UP000075920    UP000069272    UP000075883    UP000002282    UP000008711    UP000075881    UP000075900    UP000075884    UP000075901    UP000001292    UP000000304    UP000076408    UP000078200    UP000092444    UP000092443    UP000092445    UP000268350    UP000007798    UP000009192    UP000002320    UP000008792    UP000069940    UP000249989    UP000091820    UP000092553    UP000283509    UP000001819    UP000008744    UP000007110    UP000081671    UP000261540    UP000269221    UP000245037    UP000007266    UP000092461    UP000005225    UP000007267    UP000189705    UP000010552    UP000005226    UP000001074    UP000016665    UP000248482   

PRIDE

H9J337    Q2F5Y0    Q9VF27    Q8SZF2   

Pfam

PF12838   Fer4_7

Interpro

IPR017896   4Fe4S_Fe-S-bd        + More
IPR017900   4Fe4S_Fe_S_CS       
IPR010226   NADH_quinone_OxRdtase_chainI       

ProteinModelPortal

H9J337   Q2F5Y0   W8RHF1   A0A2H1VBZ2   A0A2Z5U807   A0A2A4ISM1   + More
A0A2A4J7G0   A0A2W1C0Y9   S4PAC4   I4DKW2   A0A194RJE2   A0A1J1IQG3   A0A0K8TU16   A0A194PIC3   A0A067RHY4   A0A0L0BYH1   U5ESC7   A0A182TPE2   A0A182WSS7   Q7PY23   A0A182HLN0   N6U1N8   B3M382   A0A1W4VPN6   A0A182VHH3   A0A182LA26   A0A1L8EEK7   A0A084VI17   A0A1L8EEU9   A0A182ISY7   A0A182PSJ4   T1PBZ4   B4JFD3   A0A336M510   A0A182Q7R0   A0A1B6E2N4   A0A1I8PSN7   Q9VF27   W5JHJ7   A0A182VZL5   A0A182F7H2   A0A2M4AGW0   T1E7Z7   A0A1Q3FMP0   A0A182MT34   B4PRK1   B3P3W0   A0A182K3Z2   A0A2M3ZH95   A0A182RZM1   A0A182NRU3   A0A182SY40   B4HLH6   B4QXU2   A0A182Y3S4   A0A1A9VF20   D3TSE8   A0A1A9X9K7   A0A1A9ZAC5   A0A2M4C093   A0A3B0K864   B4NK63   B4K671   B8XY14   B0XGQ7   B4M4C4   Q8SZF2   A0A182GU90   A0A1A9WJT8   A0A1L8E0X3   A0A1L8E0U2   A0A0M4F2Y7   T1DF04   A0A3R7Q635   Q296Q6   B4GEU4   A0A0A9XJB4   W4ZCC6   W8BIT9   A0A1S3FIX5   A0A3B3T2E0   A0A3B3T1Y0   A0A224XT39   A0A0N8ERX8   A0A3M0JB02   A0A2P8Z4D3   A0A0K8UB25   D2A6A7   A0A034WWU5   A0A1B0CUQ8   A0A2R7X4E7   H0X8L5   K7FDZ8   A0A1U7SN14   L5KR57   A0A3B5KL55   G1PX98   U3JEL5   A0A0P4VTL7   A0A2Y9JST0  

PDB

5GUP     E-value=1.00454e-85,     Score=804

KEGG

693098    K03941 NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2 1.6.99.3] | (RefSeq) Ndufs8; NADH

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016651   GO:0016020   GO:0051539   GO:0032981   GO:0006120   GO:0009060   GO:0005747   GO:0003954   GO:0005739   GO:0008137   GO:0006979   GO:0008270   GO:0000166   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824   GO:0055114  

PANTHER

PTHR10849  

Length:

221

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02964

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.03534

outside

1  -  221

 

 

Pi

135.021272

Theta

152.055427

Tajima's D

-0.74792

CLR

0.050496

CSRT

0.184690765461727

Interpretation

Uncertain