Gene

KWMTBOMO10593

Pre Gene Modal

BGIBMGA003911

Annotation

PREDICTED:_lactosylceramide_4-alpha-galactosyltransferase-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14902420-14903036      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.506

CDS

ATGCCTGAAAAGTCGATTTTCTTCCACGAGACCTCTTGCAAGTCCGGACTGGATTCACGGCAGGCTTGCGCCGTCGAAGCAGCGGCCAGAGCTCATCCAAAATGGCAGGTCAACGTTTTAATTTCGGCGCCGATTAAAGGATACCAAAGAGGAGGCAGTTTGTCGGTACTTCGAAAATTTCGTAACGTAAAATTGTGGCGATTGAAGATATGGGAATACGCTAAAGGAACGCCGCTACAGGATATGGTGTTTAACGGTGCTTTGAACAGGACGCGCTGGAGAATATCGCACGCGTCAGATTTACTCCGTTACCTGAGCTTGTATAAGTACGGTGGGGTGTATTTAGACTTGGATACAGTGGTGGCGAAGGCTCTGGACCCCCTACCGAAGAACTGGTCAGCGAGGGAGAGCGATGAGAATGTAGCTTCTGGGATCATGTCTTTCTCGAGGGACCATGTCGGTAGAATGGTCGCCAATGCTACCATCAAGTAA

Protein

MPEKSIFFHETSCKSGLDSRQACAVEAAARAHPKWQVNVLISAPIKGYQRGGSLSVLRKFRNVKLWRLKIWEYAKGTPLQDMVFNGALNRTRWRISHASDLLRYLSLYKYGGVYLDLDTVVAKALDPLPKNWSARESDENVASGIMSFSRDHVGRMVANATIK

Uniprot

H9J324   A0A0L7L285   A0A0L7L1X8   A0A194PKA4   A0A194RNS6   A0A2W1BYH0   + More
A0A2A4J5W2   A0A212EL59   A0A194PJE5   A0A2H1VC16   A0A2A4J4W5   A0A1W4WGB2   A0A0L7KPD5   A0A2W1BRN3   A0A1L8E222   B4G6Z6   A0A1W4UUM8   Q29LZ6   A0A139WD10   A0A1L8E188   B4JR55   E0W2F6   A0A0M3QTB1   B3MMY4   A0A182JCC2   A0A1Y1MP30   A0A0L7L2D0   A0A3B0JB41   B4KIS8   A0A0Q9XCC8   B3NAP4   Q9VQK4   B4NRU3   B4I2U3   B4NXC4   A0A0Q9WMN5   B4LVN6   A0A1B6KGG8   A0A2S2P3F0   A0A0R3NYS2   A0A232FL26   A0A0J7JYB6   W5JC16   A0A084W4T9   K7J822   A0A2H8TU84   A0A3B0K7Q7   B4G6Z4   A0A2J7RGF0   Q6KCK5   A0A2A4J1Y3   A0A2J7QWN4   A0A1Y9IVT4   A0A182G6A3   A0A182H3Q5   Q17BC1   A0A2W1BX16   A0A1B6F5I9   A0A182JY95   B5DIP6   A0A182V6P6   A0A182SSX3   A0A1S4GXR4   A0A2C9GS88   Q7Q470   J9LHB6   A0A182MJS3   A0A182QPW0   A0A182L0Z2   A0A2W1BRS0   A0A2P8Y955   A0NF31   A0A182Y3H8   A0A2C9GSB1   A0A3L8DBZ6   A0A0T6AVD4   A0A0M9A6M5   A0A2C9GSH3   B4KGN8   A0A1B6IY44   B4MW12   A0A2P8Y968   A0A1S4GYF2   A0A182R2Z6   A0A182TY55   A0A1I8N4Z5   A0A0L0CMI0   B0XJQ1   A0A2J7QWR7   A0A182NU20   A0A026WK57   A0A182PCN3   A0A2M4AR53   A0A2M4ARP0   A0A182XL39   A0A1S4HCI6   A0A182L0Z1   A0A0L7QSU3   A0A182L0Z6   A0A2S2R8U0  

Pubmed

19121390    26227816    26354079    28756777    22118469    17994087    + More
15632085    18362917    19820115    20566863    28004739    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    28648823    20920257    23761445    24438588    20075255    15130086    26483478    17510324    12364791    20966253    29403074    25244985    30249741    25315136    26108605    24508170   

EMBL

BABH01037661    JTDY01003510    KOB69441.1    KOB69440.1    KQ459603    KPI93159.1    + More
KQ460124    KPJ17671.1    KZ149921    PZC77736.1    NWSH01002999    PCG67126.1    AGBW02014130    OWR42226.1    KPI93158.1    ODYU01001747    SOQ38367.1    PCG67125.1    JTDY01007510    KOB65148.1    PZC77739.1    GFDF01001405    JAV12679.1    CH479180    EDW29195.1    CH379060    EAL33898.3    KQ971361    KYB25806.1    GFDF01001581    JAV12503.1    CH916372    EDV99385.1    DS235878    EEB19812.1    CP012523    ALC38603.1    CH902620    EDV31009.1    GEZM01028141    JAV86440.1    KOB69439.1    OUUW01000004    SPP79564.1    CH933807    EDW12434.2    KRG03241.1    KRG03242.1    CH954177    EDV57567.1    AE014134    AY051524    AAF51162.1    AAK92948.1    CH981541    CM002910    EDX15321.1    KMY87803.1    CH480820    EDW54088.1    CM000157    EDW87481.1    KRJ97176.1    CH940649    KRF81616.1    EDW64430.1    GEBQ01029420    JAT10557.1    GGMR01011378    MBY23997.1    KRT04309.1    NNAY01000057    OXU31441.1    LBMM01022461    KMQ82886.1    ADMH02001645    ETN61616.1    ATLV01020383    KE525299    KFB45233.1    GFXV01005704    MBW17509.1    SPP79558.1    EDW29193.1    NEVH01003784    PNF39914.1    AJ621420    CAF18556.1    NWSH01004060    PCG65524.1    NEVH01009422    PNF32998.1    JXUM01147537    KQ570388    KXJ68372.1    JXUM01107787    JXUM01107788    JXUM01107789    KQ565173    KXJ71251.1    CH477324    EAT43525.1    PZC77737.1    GECZ01024301    JAS45468.1    EDY70188.2    AAAB01008964    APCN01000801    EAA12323.3    ABLF02031340    AXCM01015903    AXCN02000788    PZC77738.1    PYGN01000790    PSN40797.1    EAU76327.2    QOIP01000010    RLU18040.1    LJIG01022746    KRT78932.1    KQ435724    KOX78307.1    APCN01000799    EDW13238.2    GECU01015852    JAS91854.1    CH963857    EDW75882.1    PSN40791.1    JRES01000195    KNC33417.1    DS233574    EDS30590.1    PNF33026.1    KK107167    EZA56405.1    GGFK01009946    MBW43267.1    GGFK01009947    MBW43268.1    KQ414758    KOC61541.1    GGMS01017185    MBY86388.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000192223    UP000008744    UP000192221    UP000001819    UP000007266    UP000001070    UP000009046    UP000092553    UP000007801    UP000075880    UP000268350    UP000009192    UP000008711    UP000000803    UP000000304    UP000001292    UP000002282    UP000008792    UP000215335    UP000036403    UP000000673    UP000030765    UP000002358    UP000235965    UP000075920    UP000069940    UP000249989    UP000008820    UP000075881    UP000075903    UP000075901    UP000075840    UP000007062    UP000007819    UP000075883    UP000075886    UP000075882    UP000245037    UP000076408    UP000279307    UP000053105    UP000007798    UP000075900    UP000075902    UP000095301    UP000037069    UP000002320    UP000075884    UP000053097    UP000075885    UP000076407    UP000053825   

PRIDE

H9J324    Q6KCK5   

Pfam

PF04488   Gly_transf_sug        + More
PF04572   Gb3_synth

Interpro

IPR007577   GlycoTrfase_DXD_sugar-bd_CS        + More
IPR029044   Nucleotide-diphossugar_trans       
IPR007652   A1-4-GlycosylTfrase_dom       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR015424   PyrdxlP-dep_Trfase       

SUPFAM

SSF53448   SSF53448        + More
SSF53383   SSF53383       

Gene 3D

3.40.640.10    

ProteinModelPortal

H9J324   A0A0L7L285   A0A0L7L1X8   A0A194PKA4   A0A194RNS6   A0A2W1BYH0   + More
A0A2A4J5W2   A0A212EL59   A0A194PJE5   A0A2H1VC16   A0A2A4J4W5   A0A1W4WGB2   A0A0L7KPD5   A0A2W1BRN3   A0A1L8E222   B4G6Z6   A0A1W4UUM8   Q29LZ6   A0A139WD10   A0A1L8E188   B4JR55   E0W2F6   A0A0M3QTB1   B3MMY4   A0A182JCC2   A0A1Y1MP30   A0A0L7L2D0   A0A3B0JB41   B4KIS8   A0A0Q9XCC8   B3NAP4   Q9VQK4   B4NRU3   B4I2U3   B4NXC4   A0A0Q9WMN5   B4LVN6   A0A1B6KGG8   A0A2S2P3F0   A0A0R3NYS2   A0A232FL26   A0A0J7JYB6   W5JC16   A0A084W4T9   K7J822   A0A2H8TU84   A0A3B0K7Q7   B4G6Z4   A0A2J7RGF0   Q6KCK5   A0A2A4J1Y3   A0A2J7QWN4   A0A1Y9IVT4   A0A182G6A3   A0A182H3Q5   Q17BC1   A0A2W1BX16   A0A1B6F5I9   A0A182JY95   B5DIP6   A0A182V6P6   A0A182SSX3   A0A1S4GXR4   A0A2C9GS88   Q7Q470   J9LHB6   A0A182MJS3   A0A182QPW0   A0A182L0Z2   A0A2W1BRS0   A0A2P8Y955   A0NF31   A0A182Y3H8   A0A2C9GSB1   A0A3L8DBZ6   A0A0T6AVD4   A0A0M9A6M5   A0A2C9GSH3   B4KGN8   A0A1B6IY44   B4MW12   A0A2P8Y968   A0A1S4GYF2   A0A182R2Z6   A0A182TY55   A0A1I8N4Z5   A0A0L0CMI0   B0XJQ1   A0A2J7QWR7   A0A182NU20   A0A026WK57   A0A182PCN3   A0A2M4AR53   A0A2M4ARP0   A0A182XL39   A0A1S4HCI6   A0A182L0Z1   A0A0L7QSU3   A0A182L0Z6   A0A2S2R8U0  

PDB

5VQM     E-value=0.0207435,     Score=83

KEGG

105841695    K01988 lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228] | (RefSeq) lactosylceramide 4-a

GO

GO:0016021   GO:0016757   GO:0003824   GO:0050512   GO:0043066   GO:0006688   GO:0035248   GO:0008376   GO:0009247  

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00594

Exp number, first 60 AAs:

0.00171

Total prob of N-in:

0.04601

outside

1  -  163

 

 

Pi

232.459271

Theta

191.182051

Tajima's D

0.679474

CLR

8.044382

CSRT

0.569821508924554

Interpretation

Uncertain