Gene

KWMTBOMO10591  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003923

Annotation

ribosomal_protein_S24_[Bombyx_mori]

Location

Bomo_Chr17(+):14887827-14888632      View in EpiBrowser

Full name

40S ribosomal protein S24      

Location in the cell

Cytoplasmic   Reliability : 2.035 Mitochondrial   Reliability : 1.339

CDS

ATGAGTGAAGGAACAGCGACTATTCGCACTCGCAAGTTCATGACCAACAGATTGTTGGCGCGCAAGCAGATGGTTTGCGATGTTTTACATCCAGGAAAACCAACCGTCAGCAAGACCGAGATCCGTGAGAAGCTCGCCAAAATGTACAAGGTTACTCCCGATGTAGTGTTCGTATTCGGTTTCAAGACAAACTTCGGAGGTGGCAAGTCAACTGGATTCGCTTTGATCTACGACACACTCGATCTGGCCAAGAAGTTCGAGCCCAAGCACAGGTTAGCCCGCCACGGCCTGTACGAGAAGAAGAGGCCCACGCGCAAACAGCGTAAAGAACGTAAGAACAGAATGAAGAAGGTCCGCGGTACCAAGAAATCTAAAGTAGGTGCGGCCTCCAAGAAGTGA

Protein

MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK

Similarity

Belongs to the eukaryotic ribosomal protein eS24 family.

Keywords

Ribonucleoprotein   Ribosomal protein  

Feature

chain  40S ribosomal protein S24

Uniprot

I4DMD8   A0A194RK09   D1LYK8   A0A212EL84   Q6PUF7   I4DIS6   + More
A7KCX7   G0ZED1   A0A3S2TDB1   A0A0L7K9A9   E3UKP3   A0A2W1BVS8   A0A2A4IY20   A0A0K8TH14   A0A2H1VC29   Q962Q6   S4PV71   E7DZ12   Q6F461   Q4LB02   Q4LB01   V5I9Q1   D1M7Z3   A0A158NYH2   E2A641   A0A0J7LA87   A0A151J9M0   D6WFK5   A0A195CVW2   E2C1X5   F4WT28   E9JCY5   Q4LB03   A0A195F7B6   A0A026WMG3   Q4LAZ9   A0A195AZ84   A0A1E1WM94   N6UCH0   J3JWJ3   A0A088A5I5   V9IDW0   A0A0C9QHN1   A0A0C9QGY4   A0A1B6JX74   A0A171B9G5   A0A151WHJ6   A0A023F9E9   A0A224XZS8   K7IZZ4   A0A2A3EGV2   A0A109NIA6   A0A1D1XMT2   A0A0N0U5F1   A0A067QME5   A0A310SLI5   R4FPG8   A5HMP1   A0A0A9Z7E1   A0A0K8SQ58   A0A0P4VM75   A0A1B6DK47   A0A1W5I1D7   A0A069DNQ9   A0A1B6DKS0   A0A1B6D2S6   A0A154P6P6   A0A0L7QTD8   A0A2P8ZDU5   A0A2R7WZR0   A0A1B6K3J5   Q56FE4   A0A1W4VDA6   B3MEC3   A0A1J1HE02   A0A3B0JNX3   B4GC23   Q290H1   A0A0K8TQ75   A0A1B0D3Q4   A0A182K138   B4I872   B3NLI3   B4QHJ7   Q9W229   Q6XIP3   W8BKK8   A0A182N803   B4J4H7   D3TPY6   A0A1A9XIY8   A0A1A9WNJ3   B4MQG1   A0A0M4E0V6   A0A1A9VKQ7   A0A1A9ZKW2   A0A084WLA6   A0A1L8DS36   A0A1Q3F976   B0WPH5  

Pubmed

22651552    26354079    22118469    19121390    17603110    26227816    + More
28756777    14668217    23622113    21347285    20798317    18362917    19820115    21719571    21282665    24508170    23537049    22516182    25474469    20075255    24845553    25401762    26823975    27129103    26334808    29403074    17994087    15632085    23185243    26369729    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    23636399    26109357    26109356    14525923    17550304    24495485    20353571    24438588   

EMBL

AK402456    BAM19078.1    KQ460124    KPJ17670.1    GU084282    ACY95315.1    + More
AGBW02014130    OWR42227.1    BABH01037652    AY578155    AY769339    AAS91555.1    AAV34881.1    AK401194    KQ459603    BAM17816.1    KPI93157.1    EF207970    ABS57445.1    JF265009    AEL28840.1    RSAL01000304    RVE42719.1    JTDY01010218    KOB59867.1    HM449917    ADO33052.1    KZ149921    PZC77734.1    NWSH01005491    PCG64164.1    GBRD01000934    JAG64887.1    ODYU01001747    SOQ38365.1    AF400220    GAIX01009048    JAA83512.1    HQ424715    ADT80659.1    AB180429    BAD26673.1    AM040000    CAJ01865.1    AM040001    CAJ01866.1    GALX01002545    JAB65921.1    GU120417    ACY71267.1    ADTU01003827    GL437108    EFN71100.1    LBMM01000066    KMR05101.1    KQ979403    KYN21717.1    KQ971328    EFA00935.2    KQ977220    KYN04823.1    GL452008    EFN78087.1    GL888331    EGI62641.1    GL771866    EFZ09298.1    AM039999    CAJ01864.1    KQ981768    KYN35964.1    KK107151    EZA57262.1    AM040003    CAJ01868.1    KQ976701    KYM77269.1    GDQN01003078    JAT87976.1    APGK01034467    KB740914    KB631869    ENN78331.1    ERL86839.1    BT127611    AEE62573.1    JR040814    JR040815    AEY59313.1    AEY59314.1    GBYB01003039    JAG72806.1    GBYB01002739    JAG72506.1    GECU01003902    JAT03805.1    GEMB01000108    JAS03003.1    KQ983114    KYQ47311.1    GBBI01000590    JAC18122.1    GFTR01002304    JAW14122.1    KZ288262    PBC30386.1    KC507320    AHB12443.1    GDJX01024239    JAT43697.1    KQ435775    KOX75024.1    KK853170    KDR10346.1    KQ761592    OAD57369.1    GAHY01000889    JAA76621.1    EF541357    ABQ18248.1    GBHO01004326    GBRD01010559    GDHC01002003    JAG39278.1    JAG55265.1    JAQ16626.1    GBRD01010560    JAG55264.1    GDKW01003258    JAI53337.1    GEDC01011229    JAS26069.1    KJ650197    AHY30857.1    GBGD01003439    JAC85450.1    GEDC01011019    JAS26279.1    GEDC01017311    JAS19987.1    KQ434817    KZC06868.1    KQ414747    KOC61880.1    PYGN01000086    PSN54665.1    KK855850    PTY24115.1    GECU01001675    JAT06032.1    AY961556    AAX62458.1    CH902619    EDV36529.1    CVRI01000001    CRK86221.1    OUUW01000001    SPP74341.1    CH479181    EDW32366.1    CM000071    EAL25391.1    KRT02150.1    GDAI01001305    JAI16298.1    AJVK01011006    CH480824    EDW56797.1    CH954179    EDV54899.1    CM000362    CM002911    EDX08226.1    KMY95821.1    AE013599    AY113512    AAF46871.1    AAM29517.1    AY231786    AY232085    CM000158    AAR09809.1    EDW91812.1    GAMC01004690    JAC01866.1    CH916367    EDW01659.1    EZ423488    ADD19764.1    CH963849    EDW74350.1    CP012523    ALC38866.1    ATLV01024210    KE525350    KFB51000.1    GFDF01004949    JAV09135.1    GFDL01010953    JAV24092.1    DS232024    EDS32363.1   

Proteomes

UP000053240    UP000007151    UP000005204    UP000053268    UP000283053    UP000037510    + More
UP000218220    UP000005205    UP000000311    UP000036403    UP000078492    UP000007266    UP000078542    UP000008237    UP000007755    UP000078541    UP000053097    UP000078540    UP000019118    UP000030742    UP000005203    UP000075809    UP000002358    UP000242457    UP000053105    UP000027135    UP000076502    UP000053825    UP000245037    UP000192221    UP000007801    UP000183832    UP000268350    UP000008744    UP000001819    UP000092462    UP000075881    UP000001292    UP000008711    UP000000304    UP000000803    UP000002282    UP000075884    UP000001070    UP000092443    UP000091820    UP000007798    UP000092553    UP000078200    UP000092445    UP000030765    UP000002320   

PRIDE

Q6PUF7    A0A088A5I5    Q9W229   

Pfam

PF01282   Ribosomal_S24e

Interpro

IPR018098   Ribosomal_S24e_CS        + More
IPR001976   Ribosomal_S24e       
IPR012678   Ribosomal_L23/L15e_core_dom_sf       

SUPFAM

SSF54189   SSF54189       

ProteinModelPortal

I4DMD8   A0A194RK09   D1LYK8   A0A212EL84   Q6PUF7   I4DIS6   + More
A7KCX7   G0ZED1   A0A3S2TDB1   A0A0L7K9A9   E3UKP3   A0A2W1BVS8   A0A2A4IY20   A0A0K8TH14   A0A2H1VC29   Q962Q6   S4PV71   E7DZ12   Q6F461   Q4LB02   Q4LB01   V5I9Q1   D1M7Z3   A0A158NYH2   E2A641   A0A0J7LA87   A0A151J9M0   D6WFK5   A0A195CVW2   E2C1X5   F4WT28   E9JCY5   Q4LB03   A0A195F7B6   A0A026WMG3   Q4LAZ9   A0A195AZ84   A0A1E1WM94   N6UCH0   J3JWJ3   A0A088A5I5   V9IDW0   A0A0C9QHN1   A0A0C9QGY4   A0A1B6JX74   A0A171B9G5   A0A151WHJ6   A0A023F9E9   A0A224XZS8   K7IZZ4   A0A2A3EGV2   A0A109NIA6   A0A1D1XMT2   A0A0N0U5F1   A0A067QME5   A0A310SLI5   R4FPG8   A5HMP1   A0A0A9Z7E1   A0A0K8SQ58   A0A0P4VM75   A0A1B6DK47   A0A1W5I1D7   A0A069DNQ9   A0A1B6DKS0   A0A1B6D2S6   A0A154P6P6   A0A0L7QTD8   A0A2P8ZDU5   A0A2R7WZR0   A0A1B6K3J5   Q56FE4   A0A1W4VDA6   B3MEC3   A0A1J1HE02   A0A3B0JNX3   B4GC23   Q290H1   A0A0K8TQ75   A0A1B0D3Q4   A0A182K138   B4I872   B3NLI3   B4QHJ7   Q9W229   Q6XIP3   W8BKK8   A0A182N803   B4J4H7   D3TPY6   A0A1A9XIY8   A0A1A9WNJ3   B4MQG1   A0A0M4E0V6   A0A1A9VKQ7   A0A1A9ZKW2   A0A084WLA6   A0A1L8DS36   A0A1Q3F976   B0WPH5  

PDB

4V6W     E-value=3.21237e-46,     Score=459

KEGG

100101150    K02974 small subunit ribosomal protein S24e | (RefSeq) RpS24; ribosomal protein S24

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0022626   GO:0022627   GO:0002181   GO:0005622   GO:0000166   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824  

PANTHER

PTHR10496  

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.52068

Exp number, first 60 AAs:

1.17415

Total prob of N-in:

0.50041

outside

1  -  132

 

 

Pi

289.922646

Theta

227.971817

Tajima's D

0.840258

CLR

0

CSRT

0.612619369031548

Interpretation

Uncertain