SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10590
Pre Gene Modal
BGIBMGA003914
Annotation
PREDICTED:_monocarboxylate_transporter_14-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.78
 

Sequence

CDS
ATGGAGGATGAATGTGGCCTTGTCTTGAAGCGCAGCAGGACGCCCAGGTCCAAAGATACTAATGACGTCGTACGCGAGTCTCTTCTATCAGAATCCACTTCTGGATTCGGTAAAGGAGAAGAAGACACGACCAGCATTGGTACAACTTCATTCTCTAGTCCCGATTTGGAAATAAGCAGCAAAGAAGCGGTTCTATTTAAATTCAACGATAAAACCAAAAGGAATAATAATAATCATGTCAAAATAATTGAAAATCCAGCCGATGAAGACGTTGACTTTGATAGATCGGTCGCTGGAGATGATAAAGTGTCCATTCCAGACGGAGGATGGGGCTGGGTGGTCGTTTTCTCGTCGTTCGTGATATCCATGATAGCTGACGGCATCAGCTTCTCCTTTGGTTTGCTATACATAGAATTTTTAGAGGAATTTCAGGCCAGCAAATCAACGACCGCCTGGATCGGGAGTCTGTTCATTGCTGTGCCATTACTGTCGGGACCAGTGATGAGTGCTTTAGTAGACAGATATGGTTGTCGAAGCATGACAATACTCGGTGGAATTATATCGACATTAGGCTTTGTGTTGGCATCAATCTCGACAACTTTAGAAATGATGATGATCACTTTTGGTGTGATCGCTGGACTTGGATTGGGTCTGGTTTACGTCACAGCCGTCGTATCAATCGCCTATTGGTTTGAAAAGAAGAGGAATTTAGCTGTAGGTCTTGGGGCATGTGGTACTGGTGTGGGAACATTCGTTTACGCCCCAATGACCCAATATTTCATTGATGAATACGGCTGGAGGGGAACCATATTACTGCTTTCTGGGACACTGCTGAATCTATGCGTCTGTGGCTGTGTGATGCGTGATCCCGAATGGTGGATTATAGAACAGAAGAGACAAAGAATGAAAGATATGAAGAGTACGAGAAACTCCAGTACTTTGTCAATTTCGAATCATCACGGCCAAGAGGCTGATTCTCCAACGAGAGGTAAATTCATGGAGGGACTGATAAAACGAGGAGTATCCCCAGAGACTGTGATAAGACAAGAAGCAGAAACCATAAGGCAACAGAAAATTGTTTTTTTGCCAGAAACTTCGGGTAGACCAAGGTCGAAATCTGTGGTGGATCTTCCGACGTATTCTACTCAAAATGATAAGATATCGTTATCCGCACTAGAAACTTTAATTAAAACAATCGGTAAAGAGTACGAAATCGAAGTTAAATACCCAAAGTTCGCTTTGAACTCGAATAAGAGACGGCTAAAAAGAGAAGCTAGGATTGAGGACTATCCACTGTACGCCGAACCCAAAAATGTGCAAAGGACGTATTCAGATATATGTGAATTACATGGAAAAAATAATTTTGATGAGAATCAAGATAATAATAAACGAGAAAGATTAATAGCGAAGACTATTTCCGAAACTAAAGATGTCGTTCTAGTTAAACAAGACAGTAAAGAGAACAAGAGAGATTGGTTGAGGAAGCAGTTGTCCGTCAATCATCATTACCTAAAAGACCTGAAGATGCCAATCACTTCGATAAGCCATAGGAACGCGATGCTCAATATCAGGAAGTACAAGCTAAAGGCCTCATCTTGTCCGGATATCTTCAAGAATTCCATGATCACAATCAACGAAAAAGAAGAGAAATGGTACGCAGACTGCGTTTCTTGTGTCTCCGATATGTTCAACGTGTCCCTATTTAAGCGTCCCACATTCAACTTACTTTGTTTGGGCACCATTATTATATTTGTCTGGTTCATCGTGCCTTACTTCTATCTCGCCGAGCACATGACCATTAAAGGATATACTGAGGATGACGGCGCTTTGATGCTCAGCTTAATTGGAATCACGAATACTATAGGAATGGTTGGCCTCGGCTGGATCGGCGATTTTCCAAATGTGTCAATTGGGAATTTATATGCAGTTTGTTTGGTACTCTGCGGTGCTTCGGTAGCGGCTATTCCACCAGCAGTAGCCAATTATTGGGTGTTGGCCGCAATAGCTTGTGCGTTTGGGCTGTTATTCGCGGCCTCGTTCACCTTTACGCCAAGTTTGCTGGTCAAACTGGTTTCGTTGGATGACTTTACATCTGCTTATGGTTTGGTGCTGTTGGCCCAAGGTATTGGGCATTTGATTGGACCTCCACTGTCAGGTTTAATTTTCGACCTGACAAACTCCTGGGAGCTCTCTTTCTATCTGTCAGGTGGATGGATAATGGCGGCTGGTGTACTCATCTCATTCATACAGCCGGTTCAAACTTATTATCAACGGAGACGTAATATCGACGACAACAAGAATAGTTTCAGCGAAGCATAG
Protein
MEDECGLVLKRSRTPRSKDTNDVVRESLLSESTSGFGKGEEDTTSIGTTSFSSPDLEISSKEAVLFKFNDKTKRNNNNHVKIIENPADEDVDFDRSVAGDDKVSIPDGGWGWVVVFSSFVISMIADGISFSFGLLYIEFLEEFQASKSTTAWIGSLFIAVPLLSGPVMSALVDRYGCRSMTILGGIISTLGFVLASISTTLEMMMITFGVIAGLGLGLVYVTAVVSIAYWFEKKRNLAVGLGACGTGVGTFVYAPMTQYFIDEYGWRGTILLLSGTLLNLCVCGCVMRDPEWWIIEQKRQRMKDMKSTRNSSTLSISNHHGQEADSPTRGKFMEGLIKRGVSPETVIRQEAETIRQQKIVFLPETSGRPRSKSVVDLPTYSTQNDKISLSALETLIKTIGKEYEIEVKYPKFALNSNKRRLKREARIEDYPLYAEPKNVQRTYSDICELHGKNNFDENQDNNKRERLIAKTISETKDVVLVKQDSKENKRDWLRKQLSVNHHYLKDLKMPITSISHRNAMLNIRKYKLKASSCPDIFKNSMITINEKEEKWYADCVSCVSDMFNVSLFKRPTFNLLCLGTIIIFVWFIVPYFYLAEHMTIKGYTEDDGALMLSLIGITNTIGMVGLGWIGDFPNVSIGNLYAVCLVLCGASVAAIPPAVANYWVLAAIACAFGLLFAASFTFTPSLLVKLVSLDDFTSAYGLVLLAQGIGHLIGPPLSGLIFDLTNSWELSFYLSGGWIMAAGVLISFIQPVQTYYQRRRNIDDNKNSFSEA

Summary

EMBL
BABH01037651    ODYU01001747    SOQ38363.1    KZ149921    PZC77733.1    KQ459603    + More
KPI93156.1    KQ460124    KPJ17669.1    AGBW02014130    OWR42228.1    JTDY01000791    KOB75862.1    KQ435732    KOX77337.1    KZ288212    PBC32804.1    GL771849    EFZ09427.1    KQ779356    OAD51997.1    LBMM01005754    KMQ91230.1    GEBQ01017028    GEBQ01016920    GEBQ01012615    GEBQ01001956    JAT22949.1    JAT23057.1    JAT27362.1    JAT38021.1    GECZ01022618    GECZ01008634    JAS47151.1    JAS61135.1    KQ982365    KYQ57127.1    GL888062    EGI68511.1    KQ978820    KYN28133.1    GECU01028486    GECU01022863    GECU01016348    GECU01008024    JAS79220.1    JAS84843.1    JAS91358.1    JAS99682.1    NEVH01009422    PNF33023.1    KQ976595    KYM79626.1    KQ981189    KYN45223.1    GL448543    EFN84342.1    DS235115    EEB12167.1    GECZ01021235    JAS48534.1    GL444372    EFN60961.1    QOIP01000010    RLU17786.1    KK107167    EZA56497.1    NNAY01001665    OXU23277.1    KQ434924    KZC11585.1    GEDC01021494    JAS15804.1    PYGN01000790    PSN40793.1    GEDC01013652    JAS23646.1    RSAL01000304    RVE42716.1    KPI93154.1    KPJ17668.1    PZC77732.1    NWSH01007033    PCG63126.1    KQ414855    KOC60126.1    OWR42229.1    ODYU01000260    SOQ34727.1    GEZM01099141    JAV53466.1    GFXV01004536    MBW16341.1    GGMR01004731    MBY17350.1    KQ971361    EFA08671.2    ABLF02030750    KZ150013    PZC75044.1    NWSH01000554    PCG75685.1    KQ458981    KPJ04472.1    KQ977279    KYN03989.1    BABH01037649    BABH01031609    KQ460882    KPJ11474.1    GFTR01007370    JAW09056.1    ACPB03014175    BABH01031610    DS232330    EDS40145.1    GFDF01009292    JAV04792.1    GFDF01009229    JAV04855.1    ODYU01004928    SOQ45305.1    GAPW01000290    JAC13308.1    GAPW01000291    JAC13307.1    GFDL01007693    JAV27352.1    GFDL01007676    JAV27369.1    JXUM01119799    JXUM01119800    KQ566325    KXJ70232.1    KYN03988.1    APGK01038976    APGK01038977    APGK01038978    APGK01038979    KB740966    ENN76911.1    EFN84344.1    EFN60962.1    CVRI01000075    CRL08753.1    GBHO01025619    GDHC01000641    JAG17985.1    JAQ17988.1    AGBW02008415    OWR53453.1    KZC11586.1    OAD51996.1    KYM79627.1    GEDC01030362    GEDC01016970    JAS06936.1    JAS20328.1    ADTU01022996    LBMM01005457    KMQ91497.1    EGI68512.1    RSAL01000317    RVE42585.1    GANO01004466    JAB55405.1    KYQ57128.1    GEDC01029848    JAS07450.1    GFTR01007803    JAW08623.1    EZA56496.1    RLU17785.1    APGK01038973    KB631578    ENN76910.1    ERL84404.1    KOC60127.1    GANO01004465    JAB55406.1    AJWK01033271    AJWK01033272    AJWK01033273    AJWK01033274    AJWK01033275    GECZ01002733    JAS67036.1    EFZ09435.1    UFQS01000367    UFQT01000367    SSX03211.1    SSX23577.1    PNF33024.1    GGMS01007197    MBY76400.1    GFDL01015392    JAV19653.1    GFDF01009382    JAV04702.1    GFDL01015441    JAV19604.1    GFDF01009383    JAV04701.1   
Pfam
PF07690   MFS_1
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
772
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
265.69109
Exp number, first 60 AAs:
0.00032
Total prob of N-in:
0.99235
inside
1  -  107
TMhelix
108  -  130
outside
131  -  149
TMhelix
150  -  172
inside
173  -  178
TMhelix
179  -  198
outside
199  -  207
TMhelix
208  -  230
inside
231  -  236
TMhelix
237  -  254
outside
255  -  263
TMhelix
264  -  286
inside
287  -  570
TMhelix
571  -  593
outside
594  -  607
TMhelix
608  -  630
inside
631  -  636
TMhelix
637  -  659
outside
660  -  663
TMhelix
664  -  686
inside
687  -  697
TMhelix
698  -  720
outside
721  -  729
TMhelix
730  -  752
inside
753  -  772
 
 

Population Genetic Test Statistics

Pi
162.670406
Theta
172.129634
Tajima's D
-1.275905
CLR
0.24911
CSRT
0.0929953502324884
Interpretation
Uncertain
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