Gene

KWMTBOMO10587

Pre Gene Modal

BGIBMGA003921

Annotation

Uncharacterized_protein_OBRU01_22018_[Operophtera_brumata]

Location

Bomo_Chr17(+):14812537-14814032      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.229 Mitochondrial   Reliability : 1.491

CDS

ATGAATCAACAACAAGAAAAAAAAATTTACTCTCAAGAAGAGATTAAAAAGATAGCTCCAGGCTATAGAGGGAAACCAGACAAATTCGATCCTGCTAAGGGAGCTAAACGTCAACCAGGAAATCACGCCAACTTCGCAAGATTACCTGAAATTGTCGAAGAGGTCTACTCTTCCATTGGAGACGACCAAAATCTCAACAAACAAATGACCAAAGGCATGCTAATGTACTATACAACAGCTATGTTATGGGCACGTTTGTTGGATATTAAGGCCAAGCGTGGAAACACAAACTTGACCTTCCAAGAACTGGAGTTCTACAAAGCTGTCATGCAACACGAGTATAACATACCGCAGCCAGTATATCTGTTCCTAAACGGAATTGGTGAAGTTAATGATGCTACAGGTAAAACTGTGTACCTTGCAAATCATCAACTTCCAGTGACAGTTGTACAAGGTAGTGGTGGTTATCACTCAAATGCTGTAGATGACGCATCGCACAACCTCTACGAAGAGATACCCTCAATAGGTATTTGTGGAGATGTGCTAATGGCAGAATCATCAGAAGCGGCACACCCAGTGCCAAACTTCAGGGTGCTACCCCAGAATACCAAAGCAACTCGCGCAATGTGTGGGTACTTTGGACCAATAGGAGCTCGGAAAGAGGAGGTGCGTGTTTTACTGAATTCGTTCTGTATAACCGCGAACCATTTCGACGAGACCATTGGAGGAACACGTCTTAACGTTCACCTGTTACAAAGGGTCAGTGACTATTTCATGGGATGTCCTACATTCCGAAACGAAAAAGTCAAAGTTGACGCATTAACGATTGAGGGAGACGGAGTCCAACTCATCAAGTCAGTACCGACTGATGAGAACATCGAGCAGAACGCACGCTGGACGAGTCTAATTATTAGACCAAAGTCAGCAAATGCAAATTCTGTCTTAACGTTTGGTGCCTCATATCTTATGGAATACCAACTATATAAGCAAGCTATTGCAGGAAGCAATGCCAATTGGTGTTGTATCGAGCAAGTAGCTGCTGCAATACATTGGGAGATACCAGAACCATGGATAGCGAACAAAAACGCAAGAAGAGTTCTGCCACCGGGAATGGTTACTGAGAGGTTTGCCTCCATATCTGACTCCCAAAGGAACAGAACAAATGCAATTGTTCGAAGGATGATTATCAGTCCACGATGA

Protein

MNQQQEKKIYSQEEIKKIAPGYRGKPDKFDPAKGAKRQPGNHANFARLPEIVEEVYSSIGDDQNLNKQMTKGMLMYYTTAMLWARLLDIKAKRGNTNLTFQELEFYKAVMQHEYNIPQPVYLFLNGIGEVNDATGKTVYLANHQLPVTVVQGSGGYHSNAVDDASHNLYEEIPSIGICGDVLMAESSEAAHPVPNFRVLPQNTKATRAMCGYFGPIGARKEEVRVLLNSFCITANHFDETIGGTRLNVHLLQRVSDYFMGCPTFRNEKVKVDALTIEGDGVQLIKSVPTDENIEQNARWTSLIIRPKSANANSVLTFGASYLMEYQLYKQAIAGSNANWCCIEQVAAAIHWEIPEPWIANKNARRVLPPGMVTERFASISDSQRNRTNAIVRRMIISPR

Uniprot

A0A0L7KPE7   H9JY42   A0A034VRH7   A0A0C9QW42   A0A1L3KP50   A0A1L3KL85   + More
A0A1B6DIM7   A0A2J7R5Z3   A0A1L3KLY0   A0A1L3KLX2   A0A1L3KLC3   J9LDZ5   A0A2S2QM75   A0A0A9Z345   A0A0R3TX96   A0A2S2NZP7   Q6F3I8   A0A158ND08   A0A1Y1K5J2   A0A151WKH2   A0A195BQA3   A0A195EYI1   A0A1L3KLL7   A0A1L3KLB9  

Pubmed

26227816    19121390    25348373    27880757    25401762    21347285    + More
28004739   

EMBL

JTDY01007770    KOB64951.1    BABH01042137    GAKP01014522    JAC44430.1    GBYB01004882    + More
JAG74649.1    KX884603    KX884680    APG79082.1    APG79160.1    KX884047    KX884122    KX884174    APG78157.1    APG78235.1    APG78289.1    GEDC01011744    JAS25554.1    NEVH01006986    PNF36255.1    KX884210    KX884245    APG78325.1    APG78360.1    KX884204    APG78319.1    KX884095    APG78208.1    ABLF02035778    GGMS01009663    MBY78866.1    GBHO01004715    JAG38889.1    UZAE01014344    VDO13206.1    GGMR01009985    MBY22604.1    AB183424    BAD27579.1    ADTU01000871    GEZM01092003    JAV56683.1    KQ983012    KYQ48358.1    KQ976423    KYM88768.1    KQ981909    KYN33191.1    KX884092    APG78205.1    KX884084    APG78197.1   

Proteomes

UP000037510    UP000005204    UP000203799    UP000235965    UP000202428    UP000202844    + More
UP000007819    UP000046398    UP000278807    UP000005205    UP000075809    UP000078540    UP000078541    UP000202864    UP000203875   

PRIDE

H9JY42   

Pfam

PF17921   Integrase_H2C2

Interpro

IPR001584   Integrase_cat-core        + More
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       

SUPFAM

SSF53098   SSF53098       

Gene 3D

3.30.420.10    

ProteinModelPortal

A0A0L7KPE7   H9JY42   A0A034VRH7   A0A0C9QW42   A0A1L3KP50   A0A1L3KL85   + More
A0A1B6DIM7   A0A2J7R5Z3   A0A1L3KLY0   A0A1L3KLX2   A0A1L3KLC3   J9LDZ5   A0A2S2QM75   A0A0A9Z345   A0A0R3TX96   A0A2S2NZP7   Q6F3I8   A0A158ND08   A0A1Y1K5J2   A0A151WKH2   A0A195BQA3   A0A195EYI1   A0A1L3KLL7   A0A1L3KLB9  

KEGG

NA   

GO

GO:0015074   GO:0003676  

Length:

399

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.21931

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14690

outside

1  -  399

 

 

Pi

144.617216

Theta

150.810332

Tajima's D

0.01682

CLR

1.578869

CSRT

0.378431078446078

Interpretation

Uncertain