SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10586
Pre Gene Modal
BGIBMGA003921
Annotation
Uncharacterized_protein_OBRU01_22018_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 2.364
 

Sequence

CDS
ATGAATCAACAACAAGAAAAAAAAATTTACTCTCAAGAAGAGATTAAAAAGATAGCTCCAGGCTATAGAGGGAAACCAGACAAATTCGATCCTGCTAAGGGAGCTAAACGTCAACCAGGAAATCACGCCAACTTCGCAAGATTACCTGAAATTGTCGAAGAGGTCTACTCTTCCATTGGAGACGACCAAAATCTCAACAAACAAATGACCAAAGGCATGCTAATGTACTATACAACAGCTATGTTATGGGCACGTTTGTTGGATATTAAGGCCAAGCGTGGAAACACAAACTTGACCTTCCAAGAACTGGAGTTCTACAAAGCTGTCATGCAACACGAGTATAACATACCGCAGCCAGTATATCTGTTCCTAAACGGAATTGGTGAAGTTAATGATGCTACAGGTAAAACTGTGTACCTTGCAAATCATCAACTTCCAGTGACAGTTGTACAAGGTAGTGGTGGTTATCACTCAAATGCTGTAGATGACGCATCGCACAACCTCTACGAAGAGATACCCTCAATAGGTATTTGTGGAGATGTGCTAATGGCAGAATCATCAGAAGCGGCACACCCAGTGCCAAACTTCAGGGTGCTACCCAGAATACCAGAGCAACTCGCGCAATGTGTGGGTACTTTGGACCAATAG
Protein
MNQQQEKKIYSQEEIKKIAPGYRGKPDKFDPAKGAKRQPGNHANFARLPEIVEEVYSSIGDDQNLNKQMTKGMLMYYTTAMLWARLLDIKAKRGNTNLTFQELEFYKAVMQHEYNIPQPVYLFLNGIGEVNDATGKTVYLANHQLPVTVVQGSGGYHSNAVDDASHNLYEEIPSIGICGDVLMAESSEAAHPVPNFRVLPRIPEQLAQCVGTLDQ

Summary

Ontologies

GO

Topology

Length:
215
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.02484
Exp number, first 60 AAs:
0
Total prob of N-in:
0.40723
outside
1  -  215
 
 

Population Genetic Test Statistics

Pi
138.917666
Theta
161.631285
Tajima's D
-0.44192
CLR
111.143078
CSRT
0.253437328133593
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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