Silkworm Genome Informatics Database

Gene

KWMTBOMO10586

Pre Gene Modal

BGIBMGA003921

Annotation

Uncharacterized_protein_OBRU01_22018_[Operophtera_brumata]

Location

Bomo_Chr17(+):14811087-14812021 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.364

CDS

ATGAATCAACAACAAGAAAAAAAAATTTACTCTCAAGAAGAGATTAAAAAGATAGCTCCAGGCTATAGAGGGAAACCAGACAAATTCGATCCTGCTAAGGGAGCTAAACGTCAACCAGGAAATCACGCCAACTTCGCAAGATTACCTGAAATTGTCGAAGAGGTCTACTCTTCCATTGGAGACGACCAAAATCTCAACAAACAAATGACCAAAGGCATGCTAATGTACTATACAACAGCTATGTTATGGGCACGTTTGTTGGATATTAAGGCCAAGCGTGGAAACACAAACTTGACCTTCCAAGAACTGGAGTTCTACAAAGCTGTCATGCAACACGAGTATAACATACCGCAGCCAGTATATCTGTTCCTAAACGGAATTGGTGAAGTTAATGATGCTACAGGTAAAACTGTGTACCTTGCAAATCATCAACTTCCAGTGACAGTTGTACAAGGTAGTGGTGGTTATCACTCAAATGCTGTAGATGACGCATCGCACAACCTCTACGAAGAGATACCCTCAATAGGTATTTGTGGAGATGTGCTAATGGCAGAATCATCAGAAGCGGCACACCCAGTGCCAAACTTCAGGGTGCTACCCAGAATACCAGAGCAACTCGCGCAATGTGTGGGTACTTTGGACCAATAG

Protein

MNQQQEKKIYSQEEIKKIAPGYRGKPDKFDPAKGAKRQPGNHANFARLPEIVEEVYSSIGDDQNLNKQMTKGMLMYYTTAMLWARLLDIKAKRGNTNLTFQELEFYKAVMQHEYNIPQPVYLFLNGIGEVNDATGKTVYLANHQLPVTVVQGSGGYHSNAVDDASHNLYEEIPSIGICGDVLMAESSEAAHPVPNFRVLPRIPEQLAQCVGTLDQ

Uniprot

H9J334 A0A034VRH7 A0A0C9QW42 A0A1L3KP50 A0A2J7PQ25 A0A2J7R5Z3 + More
A0A1B6DIM7 A0A1L3KL85 A0A1L3KLC3 A0A1L3KLX2 Q6F3I8 A0A1L3KL92 A0A1L3KLR3 A0A3Q0IVY4

Pubmed

19121390 25348373 27880757

EMBL

BABH01037646 GAKP01014522 JAC44430.1 GBYB01004882 JAG74649.1 KX884603 + More
KX884680 APG79082.1 APG79160.1 NEVH01022640 PNF18435.1 NEVH01006986 PNF36255.1 GEDC01011744 JAS25554.1 KX884047 KX884122 KX884174 APG78157.1 APG78235.1 APG78289.1 KX884095 APG78208.1 KX884204 APG78319.1 AB183424 BAD27579.1 KX884068 APG78178.1 KX884146 APG78259.1

Proteomes

UP000005204 UP000235965 UP000203799 UP000202844 UP000202301 UP000202013 + More
UP000079169

PRIDE

H9J334

ProteinModelPortal

H9J334 A0A034VRH7 A0A0C9QW42 A0A1L3KP50 A0A2J7PQ25 A0A2J7R5Z3 + More
A0A1B6DIM7 A0A1L3KL85 A0A1L3KLC3 A0A1L3KLX2 Q6F3I8 A0A1L3KL92 A0A1L3KLR3 A0A3Q0IVY4

KEGG

NA

GO

Length:

215

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.02484

Exp number, first 60 AAs:

0

Total prob of N-in:

0.40723

outside

1 - 215

Pi

138.917666

Theta

161.631285

Tajima's D

-0.44192

CLR

111.143078

CSRT

0.253437328133593

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree