SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10579
Pre Gene Modal
BGIBMGA003918
Annotation
PREDICTED:_major_royal_jelly_protein_1-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.391 PlasmaMembrane   Reliability : 1.37
 

Sequence

CDS
ATGATATTGTTAATTATTTTCAACTCACTCCTGATTTGTAACATTAATTGTGTGCGCAATATTTACGAGAAGACACATTATTGGAATTTGTTTGGATATGATATAGACGGTATAAAATATACAAGTGATTCGGACTTCGAATACAATGAGGGCTCAATTAGTTTCGATGATGTGGAGTTGAAGGAACATGAGAAGTTTTTGATACGAAAGAATTTAGTTCCAAACCACGTTACTTTCAGTTATGATGTTTCTATAGTATCTATTCCTAGGACTAGACCAGGTATACCTTTCACTGTTAATACAATGAATACATTCAATTTTAATAAAAATGACTACAGTCCTTTACTACGCCCATATCCATCGGCAAGGGTGGCGAGGGACATAGTTTCTGTTTATGAAACAGCTGAAGATGGATGCCAAAGGCTATGGTTCGTTGATACAGGCTATTTGGATATGCCCGGTAAGAACTATACTATAATAGAGAAAATTTGA
Protein
MILLIIFNSLLICNINCVRNIYEKTHYWNLFGYDIDGIKYTSDSDFEYNEGSISFDDVELKEHEKFLIRKNLVPNHVTFSYDVSIVSIPRTRPGIPFTVNTMNTFNFNKNDYSPLLRPYPSARVARDIVSVYETAEDGCQRLWFVDTGYLDMPGKNYTIIEKI

Summary

Pfam
PF03022   MRJP
Interpro
IPR017996   Royal_jelly/protein_yellow        + More
IPR011042   6-blade_b-propeller_TolB-like       
IPR018247   EF_Hand_1_Ca_BS       
Gene 3D
PDB
3Q6T     E-value=0.000414373,     Score=98

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.655266
 
 
Length:
163
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16009
Exp number, first 60 AAs:
0.15933
Total prob of N-in:
0.01904
outside
1  -  163
 
 

Population Genetic Test Statistics

Pi
202.049139
Theta
139.190002
Tajima's D
1.413132
CLR
0.017084
CSRT
0.764811759412029
Interpretation
Uncertain
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