Silkworm Genome Informatics Database

Gene

KWMTBOMO10573

Pre Gene Modal

BGIBMGA014026

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_major_royal_jelly_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14457890-14464217 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.522

CDS

ATGGACACGCCGATGGATGAGGACAACATTGAACTGCTCACTGATGTTTCCAGGAAAAACGACTTTTACATAAGCGCTTTAAATACATTAGGGGCAGGATTTTATTTCATGGTTAATAGATTTAGGGGCTTAGTTGACAATATTTATGATGGAAACGCAATCAATTTCGCTGATTACCGCATAGACGTAGATAAAATGTTGAATAATACAAAATGCAACAAACCAACGAGATGTTCAAATTTCATTGACAGTTGGAGAAATAAAATCCAGCGTTCAGTCAGTTCATCGAAATACATGGTTAAATATGTAAGTGATGAGTACATACAATCAGAACTAGAAAGAAAGGGACGCCTTGGATGA

Protein

MDTPMDEDNIELLTDVSRKNDFYISALNTLGAGFYFMVNRFRGLVDNIYDGNAINFADYRIDVDKMLNNTKCNKPTRCSNFIDSWRNKIQRSVSSSKYMVKYVSDEYIQSELERKGRLG

Uniprot

H9B425 H9B432

EMBL

JN977510 AFC87790.1 JN977517 AFC87797.1

PRIDE

H9B425 H9B432

Pfam

PF03022 MRJP

Interpro

IPR011042 6-blade_b-propeller_TolB-like + More
IPR017996 Royal_jelly/protein_yellow

Gene 3D

2.120.10.30

ProteinModelPortal

H9B425 H9B432

KEGG

101738305 K22203 dopachrome tautomerase [EC:5.3.3.12] | (RefSeq) major royal jelly protein 1-like

PATHWAY

00350 Tyrosine metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

PANTHER

PTHR10009

Length:

119

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

15.37408

Exp number, first 60 AAs:

15.37407

Total prob of N-in:

0.17534

POSSIBLE N-term signal

sequence

outside

1 - 21

TMhelix

22 - 39

inside

40 - 119

Pi

284.175435

Theta

206.13118

Tajima's D

1.433492

CLR

0.333651

CSRT

0.769711514424279

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree