SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10573
Pre Gene Modal
BGIBMGA014026
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_major_royal_jelly_protein_1-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.522
 

Sequence

CDS
ATGGACACGCCGATGGATGAGGACAACATTGAACTGCTCACTGATGTTTCCAGGAAAAACGACTTTTACATAAGCGCTTTAAATACATTAGGGGCAGGATTTTATTTCATGGTTAATAGATTTAGGGGCTTAGTTGACAATATTTATGATGGAAACGCAATCAATTTCGCTGATTACCGCATAGACGTAGATAAAATGTTGAATAATACAAAATGCAACAAACCAACGAGATGTTCAAATTTCATTGACAGTTGGAGAAATAAAATCCAGCGTTCAGTCAGTTCATCGAAATACATGGTTAAATATGTAAGTGATGAGTACATACAATCAGAACTAGAAAGAAAGGGACGCCTTGGATGA
Protein
MDTPMDEDNIELLTDVSRKNDFYISALNTLGAGFYFMVNRFRGLVDNIYDGNAINFADYRIDVDKMLNNTKCNKPTRCSNFIDSWRNKIQRSVSSSKYMVKYVSDEYIQSELERKGRLG

Summary

Pfam
PF03022   MRJP
Interpro
IPR011042   6-blade_b-propeller_TolB-like        + More
IPR017996   Royal_jelly/protein_yellow       
Gene 3D
ProteinModelPortal

Ontologies

GO

Topology

Length:
119
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
15.37408
Exp number, first 60 AAs:
15.37407
Total prob of N-in:
0.17534
POSSIBLE N-term signal
sequence
outside
1  -  21
TMhelix
22  -  39
inside
40  -  119
 
 

Population Genetic Test Statistics

Pi
284.175435
Theta
206.13118
Tajima's D
1.433492
CLR
0.333651
CSRT
0.769711514424279
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号