Silkworm Genome Informatics Database

Gene

KWMTBOMO10570

Annotation

PREDICTED:_uncharacterized_protein_LOC101737203_[Bombyx_mori]

Location

Bomo_Chr17(+):14410578-14424212 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.229

CDS

ATGTCGACGTCGGGCTACCTAGTTAATGTGCCGAAACTCAAAGGTCGCGAAAATTACGATGATTGGGCGTTCGCAACAAGTAATTTTTTGCTGCTCGAAGGCATTGACTTGGAGAACCTTTCCGCAGAAATGAGTGAAGCTGAGATAAAAAAAGCCAAAGCCAAACTCGTCATGACTATTGACTCTTCATTATACGCGCATATCAAGAGTGCAAGTGCACACCTGACGGCAAGTCGAGATTGTTTACAGTTAAATAGACCCGTGCATGAAAACAAAGAAATAGTAGTTGCAAATCAAATGACTGTGCCTGTTGTGAGTGTTGGTGAAACACAGATAACCACGATTGTAAATGGTTCTCAGTATGATGTCATTGTAAAGAATGTTTTATACATACCGAAGCTCACGACAAACTTATTATCGGTAAGTCAACTGATAGCAAATGGCAACAAAGTGTCATTTAAGAAGGATGTTTGTTTAATATATAATCCAGTAAATGAGCTTATAGGAATTGCAAACTTAACTAATGGTGTGTACAAACTACAAATACAAAGACCAGAGAGTGCATTATTGGCCATGACAATGTGGCATAGAAGACTAGGACATGTAAACAGTAAATCTTTAGAAATGATGAAAGAAGGTGCTGTGAAAGGGGTTACTTTTGATAAGAAAGCTGATATTCAGATCAAGAACTGTGAAGTGTGCTGTGAGGGCAAACAGGCTCGTTTCCCTTTCCCATCTGCTAATCATAGAAGTGATATACTACTAGAAGTAATACACTCAGATTTATGTGGGCCGATGGAGACCAAATCAATTGGTCAAGCAAAGTACTTTCTTCTGTTCATAGATGATGCCAGCAGAATGACTTATGTCTATTTCTTGAAGGAAAAGAACCAAGTATTCCAGCATTTCAAAGAATTTCGTGTTTTGGTGGAGAATCAAACAGGAAACAAGATCAAAATATTGAGAACAGATAACGGAGGTGAGTTTTGTTCACAAGAGATGGAAGACTTCTTAAAACAAACTGGAATCATCCATCAGAAGACTAATCCTCACACTCCACAACAGAATGGACTCTCAGAAAGGTTCAACAGAACTGTAGTTGAACGGGCTAGATGTTTACTGTTTGAATCAGATCTCGACAAAAGTTTTTGGGGTGAAGCAGTGAATACTGCAGTATACCTAATGAATAGAATGCCAGCTGTCAGTCTAGGCATGATAACACCATTTGAGAAGTGGACAGGCAAGAAGCCAGATTTGAGCTATGTCAGGATTTTTGGAAGTAAAGTAATGGTGCATGTTCCCAAAGTGCAAAGACAAAAATGGGATAAGAAGGCTGACAAATTAATTCTAGTTGGTTATCCGGATAACGTGAAAGGTTACAGATTATATAACCCCAAAACCAAGAAGATTACTACGAGCAGGGACGTCATTATAATAGAGAAAGAACACTCGGACACAGCTCAGGTAGTAGTAAATAATGAAAAAGTGTTGGAGAAAGTTGAAAATTCAGAGAAAGAGAGAAGCATATCAGAAAATTCAACTATAGACGCTAACAATCCTACATATATTTATGACTCATCGAGCTCCCACGAAGATTCATATCAATCGGTGTATGAAAGTGAAAATGAGTCAACCTTAGAATCCATTTTAGAAGAAAATATTCAAAACTTACAGGAGCTTGGTAAGCGCAAGAGAAAGCCAGTAGAAAGATATGGCTATTCCAATCTCTGCATTGTAGATGAGCTGGAATCCTGTGGTGAAGAACTGAGTTATGAAACAGCAATAAATGGACCAGAGAAGGAACTGTGGGAACAGGCGATGGCAGAAGAACTGAAGGCATTTGAAGAAAACCAAGCATGGGAATTTGTTGACAGAAAAGAAGCTGATAGGATAGTGCAATGTAAATGGGTTTTTAAGAAAAAGTTTGAATGTGATGGTAAAGTGCGTTATAGGGCTAGACTGGTAGCAAAAGGTTTTACTCAAAAAGAAGGTGTGCGAAAGCAAGTACAACCAGCATCATTGATACTTTACAGTACTAATTTAAGACCAAAGTTTCAGTTCAGGAAAAATATTGACAGTGCTTTTCTCCACAATGGTATCACTAGTGGACTCCGATCTCTATCGGTTGATTTTATATTACCGTGCTCCGAGTCTTACGTATACATTACTGACGACACTACCGGCGACCTCATTGTCTTCTCGCTTCAGGACTTGCGTTTTACGAAAATCAGCCGCGCAAGTAATACGGCTGATTCTTGGGAATTTATTGTGCCACAGTTTGAAACACAATACAGGTTAGAAGTTGAAAAATATAGAAAAAGGCCAAAAGAAACGTACGAACACTATGTGGATTTTTTAAATTCTACAAATCAACTGTATGATCCAATAAGTGATTCAAGACCTCGTGATACATTTAACAACACCTACTATCCAAATTATGAAGGGTTGCTCTACACGAAAAATTTTGAAGGAAACATTTTGCTATTCACGAATTGGAACCGTAACAAGCTTTACTGTTGGAATATGGATACTCCATATGAAGAAGAAAATGTTGATTTACTCGCGAGACTCGATGAGGCTGACTATAGATTTTCAGCCTTAGACGCATCGGGTAGCGGTTGTTACGCACTAATACAGAGAACTTTAAATAGCACGTCGTCAAAGTTCAATGAAGAGAAATACAATTTTTGGTTTTTCTCAAATAACCTTGAGGAGCTGCTGGAGGGATCAAAATGCACCAAGAGTAACCAGTGCACGGATTACGTGATGCGGAGATCGGCGAGCCAAACATTACTATTTTCCAAAAGAATAGCACCAAAATACGTATCTGATAACGTCATTAGAAATGTTGAAAATATATGGAAGGTCAAGGGCATTGTGAATTAA

Protein

MSTSGYLVNVPKLKGRENYDDWAFATSNFLLLEGIDLENLSAEMSEAEIKKAKAKLVMTIDSSLYAHIKSASAHLTASRDCLQLNRPVHENKEIVVANQMTVPVVSVGETQITTIVNGSQYDVIVKNVLYIPKLTTNLLSVSQLIANGNKVSFKKDVCLIYNPVNELIGIANLTNGVYKLQIQRPESALLAMTMWHRRLGHVNSKSLEMMKEGAVKGVTFDKKADIQIKNCEVCCEGKQARFPFPSANHRSDILLEVIHSDLCGPMETKSIGQAKYFLLFIDDASRMTYVYFLKEKNQVFQHFKEFRVLVENQTGNKIKILRTDNGGEFCSQEMEDFLKQTGIIHQKTNPHTPQQNGLSERFNRTVVERARCLLFESDLDKSFWGEAVNTAVYLMNRMPAVSLGMITPFEKWTGKKPDLSYVRIFGSKVMVHVPKVQRQKWDKKADKLILVGYPDNVKGYRLYNPKTKKITTSRDVIIIEKEHSDTAQVVVNNEKVLEKVENSEKERSISENSTIDANNPTYIYDSSSSHEDSYQSVYESENESTLESILEENIQNLQELGKRKRKPVERYGYSNLCIVDELESCGEELSYETAINGPEKELWEQAMAEELKAFEENQAWEFVDRKEADRIVQCKWVFKKKFECDGKVRYRARLVAKGFTQKEGVRKQVQPASLILYSTNLRPKFQFRKNIDSAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTGDLIVFSLQDLRFTKISRASNTADSWEFIVPQFETQYRLEVEKYRKRPKETYEHYVDFLNSTNQLYDPISDSRPRDTFNNTYYPNYEGLLYTKNFEGNILLFTNWNRNKLYCWNMDTPYEEENVDLLARLDEADYRFSALDASGSGCYALIQRTLNSTSSKFNEEKYNFWFFSNNLEELLEGSKCTKSNQCTDYVMRRSASQTLLFSKRIAPKYVSDNVIRNVENIWKVKGIVN

Uniprot

A0A0N1ICY1 T1PKV2 A0A061F3M7 A0A061GT04 A0A0J7KDE2

Pubmed

26354079 23731509

EMBL

KQ460882 KPJ11482.1 KA648745 AFP63374.1 CM001883 EOY11267.1 + More
CM001887 EOY32548.1 LBMM01008998 KMQ88473.1

Proteomes

UP000053240 UP000026915 UP000036403

Pfam

PF13976   gag_pre-integrs        + More
PF00665   rve
PF13961   DUF4219
PF07727   RVT_2
PF00098   zf-CCHC

Interpro

IPR036875   Znf_CCHC_sf        + More
IPR012337   RNaseH-like_sf
IPR001878   Znf_CCHC
IPR013103   RVT_2
IPR001584   Integrase_cat-core
IPR039537   Retrotran_Ty1/copia-like
IPR025314   DUF4219
IPR025724   GAG-pre-integrase_dom
IPR036397   RNaseH_sf

SUPFAM

SSF53098 SSF53098 + More
SSF57756 SSF57756

Gene 3D

3.30.420.10

ProteinModelPortal

A0A0N1ICY1 T1PKV2 A0A061F3M7 A0A061GT04 A0A0J7KDE2

PDB

1C1A E-value=0.000329911, Score=108

KEGG

101737203 K22203 dopachrome tautomerase [EC:5.3.3.12] | (RefSeq) yellow-11; protein yellow-like

PATHWAY

00350 Tyrosine metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0000943 GO:0015074 GO:0008270 GO:0003676 GO:0003964 GO:0051287 GO:0008442 GO:0006284 GO:0003906 GO:0005634 GO:0006285 GO:0019104 GO:0003824

PANTHER

PTHR11439

Length:

961

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01458

Exp number, first 60 AAs:

0.00047

Total prob of N-in:

0.00066

outside

1 - 961

Pi

225.588261

Theta

18.761257

Tajima's D

0.20598

CLR

0.062102

CSRT

0.433278336083196

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree