Gene

KWMTBOMO10563

Pre Gene Modal

BGIBMGA014030

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14145406-14146397      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.227

CDS

ATGGCTTGCAAAGCTATGTTACTACTTTTCTTGATACTATTTTCAGTTAACGCCAATACAATCAGTGATAAAGATCTAAAGGGCAAAAATGTCATCGTGACTGGGGCAGCTAGAGGTATAGGATATGCTATTGCAGATAATTTCCTAGCTAATGGAGTCAATCTAATAATTATTCTGGATAAAAATGCTACTAACGGAGTAAGTGCAGCAGAAACTCTGAAATGTAAACATGGAAGAGATAAAGTTATTTTTATACCGTGTGATGTTACGAAAGATCTTCTTCTGTTGGATGTAATAATTGATCTATATGGGCCAATAGACGTGTTGGTAAACAATGCTGGAATACTTGATGAGGCCCAACCCAGAAAAATGATACTGACAAATAGCATTGCACCGATTGAATGGTCATTGAAATTCAGAGAATACGCGAGAAAAGACAAAGGCGGTCATGGCGGAACTATTATAAACACCGCGTCTAGGTCAGGTTACAGAATAACCCCATTCATGGTTTCTTACAGTTCATCCAAGTACGCTAGTTCAACATTCAGTAAGTCTTTAGGACACCCATATAACTTCAAAAGAACAGGAATCAGGATTGTGGCTCTATGTCCAGAACTGACCCACACTGCGATGACTGCAAAGCAAACAGTTTGGGGTGATCAATTGGAAGATTATAAAAAAGTAATCAAGGATGCCGTTTGGCAGGAACCAGATGAAGTCGGCAAAGCAGTCGTCCAAATATTCAAGATTGCTGATTCCGGCACCGCTTGGAGAATTTCTGGGGGTAAACACACCTTAGCTCCGGCCTATCAATATTTGACAGATGAAGAAATTGAAAAGGCTTTATACATGTAG

Protein

MACKAMLLLFLILFSVNANTISDKDLKGKNVIVTGAARGIGYAIADNFLANGVNLIIILDKNATNGVSAAETLKCKHGRDKVIFIPCDVTKDLLLLDVIIDLYGPIDVLVNNAGILDEAQPRKMILTNSIAPIEWSLKFREYARKDKGGHGGTIINTASRSGYRITPFMVSYSSSKYASSTFSKSLGHPYNFKRTGIRIVALCPELTHTAMTAKQTVWGDQLEDYKKVIKDAVWQEPDEVGKAVVQIFKIADSGTAWRISGGKHTLAPAYQYLTDEEIEKALYM

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JWW6   H9JWW7   H9JYK0   H9JWW0   H9JWW1   H9J369   + More
A0A0H4TDA9   H9J8J0   A0A0L7KQW0   H9J8I4   A0A194R4F0   A0A194R949   A0A2A4JIR0   A0A1L8D6N5   A0A194R584   H9J8I9   Q1HPX6   A0A2W1BR60   A0A0L7LJP6   A0A2W1BSK9   A0A0F6Q0W0   A0A2H1VNC8   A0A0F6Q0X5   A0A0F6Q2J9   A0A2W1BL60   H9J8I5   D2SNK3   U5KC20   A0A194QJQ6   S4PIB4   H9J355   A0A194R3L5   A0A0H4TD16   A0A0H4TH26   A0A212F936   A0A0F6Q4H7   A0A2H1VSR5   A0A212F911   I4DKW3   H9J8I6   A0A0L7K2F9   A0A2H1VR53   H9J354   A0A2A4JJW8   H9J353   A0A0C9R6P4   B0XI43   A0A026WTY5   A0A195B3G6   A0A067QWG1   A0A2P8Z2R9   K7IV86   A0A0J7L5T5   A0A232EGH1   A0A195ETI6   F4W473   A0A158NP49   A0A195CLI9   A0A195E4S8   E2B6N3   F4W474   A0A2H8TFE7   A0A2S2NV02   A0A154PC81   A0A0M9A7K7   J9JKN0   A0A151WLU8   A0A2A3EAR6   E0VAP2   A0A195ET92   A0A310S8E6   A0A088A502   A0A154PE73   A0A0J7L0X1   E9I9W7   A0A1S4G7W1   E2A711   A0A067R8Z3   E2B6N2   A0A151X1L8   H9J0A6   A0A1W4WBZ1   A0A026WRA5   A0A088A4Z7   B0XCJ1   A0A0C9RAC9   A0A194QRC6   R4FLI9   B0XI42   A0A0L7QSX6   A0A2J7QGZ8   A0A310SBI2   A0A2J7QR36   A0A195B441   A0A182GQQ8  

Pubmed

19121390    26227816    26354079    28756777    20074338    24053512    + More
23622113    22118469    22651552    24508170    24845553    29403074    20075255    28648823    21719571    21347285    20798317    20566863    21282665    17510324    30249741    26483478   

EMBL

BABH01040078    BABH01044234    BABH01043465    BABH01043464    BABH01036649    KP899549    + More
AKQ06148.1    BABH01027538    JTDY01007189    KOB65394.1    BABH01027525    KQ460779    KPJ12399.1    KPJ12396.1    NWSH01001322    PCG71699.1    GEYN01000013    JAV02116.1    KPJ12400.1    DQ443276    ABF51365.1    KZ149989    PZC75627.1    JTDY01000876    KOB75589.1    PZC75626.1    KP237884    AKD01737.1    ODYU01003471    SOQ42306.1    KP237899    AKD01752.1    KP237873    AKD01726.1    PZC75628.1    BABH01027529    BABH01027530    EZ407131    ACX53694.1    KC007343    AGQ45608.1    KQ459144    KPJ03686.1    GAIX01005455    JAA87105.1    BABH01036642    KPJ12398.1    KP899551    AKQ06150.1    KP899550    AKQ06149.1    AGBW02009651    OWR50237.1    KP237875    AKD01728.1    ODYU01003911    SOQ43254.1    OWR50236.1    AK401931    BAM18553.1    KPJ03685.1    BABH01027533    JTDY01017041    KOB51868.1    SOQ43256.1    PCG71700.1    BABH01036648    GBYB01012004    JAG81771.1    DS233256    EDS28983.1    KK107119    EZA58569.1    KQ976625    KYM79031.1    KK852879    KDR14474.1    PYGN01000223    PSN50783.1    AAZX01008191    LBMM01000659    KMQ97859.1    NNAY01004765    OXU17447.1    KQ981979    KYN31471.1    GL887491    EGI71069.1    ADTU01001531    KQ977642    KYN00939.1    KQ979609    KYN20168.1    GL446000    EFN88617.1    EGI71070.1    GFXV01001021    MBW12826.1    GGMR01008279    MBY20898.1    KQ434870    KZC09506.1    KQ435727    KOX78096.1    ABLF02032246    ABLF02032258    KQ982944    KYQ48859.1    KZ288303    PBC28808.1    DS235012    EEB10448.1    KYN31470.1    KQ771134    OAD52541.1    KZC09510.1    LBMM01001364    KMQ96442.1    GL761846    EFZ22724.1    GL437252    EFN70743.1    KK852855    KDR14911.1    EFN88616.1    KQ982585    KYQ54299.1    BABH01019209    QOIP01000009    EZA58570.1    RLU18591.1    DS232698    EDS44853.1    GBYB01013389    JAG83156.1    KQ461175    KPJ07894.1    ACPB03004191    GAHY01001368    JAA76142.1    EDS28982.1    KQ414755    KOC61725.1    NEVH01014359    PNF27833.1    OAD52543.1    NEVH01011985    PNF31051.1    KYM79032.1    JXUM01081117    KQ563228    KXJ74247.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000218220    UP000053268    UP000007151    + More
UP000002320    UP000053097    UP000078540    UP000027135    UP000245037    UP000002358    UP000036403    UP000215335    UP000078541    UP000007755    UP000005205    UP000078542    UP000078492    UP000008237    UP000076502    UP000053105    UP000007819    UP000075809    UP000242457    UP000009046    UP000005203    UP000000311    UP000192223    UP000279307    UP000015103    UP000053825    UP000235965    UP000069940    UP000249989   

PRIDE

H9JWW6    H9JWW7    H9JYK0    H9JWW0    H9JWW1    H9J369    + More
H9J8J0    H9J8I4    H9J8I9    Q1HPX6    H9J8I5    H9J355    H9J8I6    H9J354    H9J353    H9J0A6   

Pfam

PF00106   adh_short

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JWW6   H9JWW7   H9JYK0   H9JWW0   H9JWW1   H9J369   + More
A0A0H4TDA9   H9J8J0   A0A0L7KQW0   H9J8I4   A0A194R4F0   A0A194R949   A0A2A4JIR0   A0A1L8D6N5   A0A194R584   H9J8I9   Q1HPX6   A0A2W1BR60   A0A0L7LJP6   A0A2W1BSK9   A0A0F6Q0W0   A0A2H1VNC8   A0A0F6Q0X5   A0A0F6Q2J9   A0A2W1BL60   H9J8I5   D2SNK3   U5KC20   A0A194QJQ6   S4PIB4   H9J355   A0A194R3L5   A0A0H4TD16   A0A0H4TH26   A0A212F936   A0A0F6Q4H7   A0A2H1VSR5   A0A212F911   I4DKW3   H9J8I6   A0A0L7K2F9   A0A2H1VR53   H9J354   A0A2A4JJW8   H9J353   A0A0C9R6P4   B0XI43   A0A026WTY5   A0A195B3G6   A0A067QWG1   A0A2P8Z2R9   K7IV86   A0A0J7L5T5   A0A232EGH1   A0A195ETI6   F4W473   A0A158NP49   A0A195CLI9   A0A195E4S8   E2B6N3   F4W474   A0A2H8TFE7   A0A2S2NV02   A0A154PC81   A0A0M9A7K7   J9JKN0   A0A151WLU8   A0A2A3EAR6   E0VAP2   A0A195ET92   A0A310S8E6   A0A088A502   A0A154PE73   A0A0J7L0X1   E9I9W7   A0A1S4G7W1   E2A711   A0A067R8Z3   E2B6N2   A0A151X1L8   H9J0A6   A0A1W4WBZ1   A0A026WRA5   A0A088A4Z7   B0XCJ1   A0A0C9RAC9   A0A194QRC6   R4FLI9   B0XI42   A0A0L7QSX6   A0A2J7QGZ8   A0A310SBI2   A0A2J7QR36   A0A195B441   A0A182GQQ8  

PDB

2GDZ     E-value=2.76951e-16,     Score=207

KEGG

101737773    no KO assigned | (RefSeq) 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like

GO

GO:0016491   GO:0004022   GO:0016404   GO:0004616   GO:0051287   GO:0008442   GO:0006284   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824  

SignalP

Position:   1 - 18,         Likelihood:  0.997021

 

 

Length:

284

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.48133

Exp number, first 60 AAs:

3.38686

Total prob of N-in:

0.11010

outside

1  -  284

 

 

Pi

34.510376

Theta

58.803608

Tajima's D

-1.197481

CLR

2.508704

CSRT

0.106044697765112

Interpretation

Uncertain