Gene

KWMTBOMO10562  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014031

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14140427-14141607      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.57

CDS

ATGGCTGTAGAGTTAACGTTTCTATTTTGCCTAGTAATACTTTCGGTTAGGGCCAATTCAATCAGTGACAAGGATCTAAAAGGTAAAAATGTTATCGTGACCGGGGCAGCTAGAGGTATAGGATACGCTATAGCTGATAATTTCTTAGCTAATGGAGTCAATCTAATTATAATCTTAGATAAAAATGTGACTAACGGAGTAAGAGCAGCTGAAACTCTAAAATGTAAATATGGGAGAGGTAAGACTATTTTTATACCATGCGATGTTACGAAAGATCTTCAACTGTGGGATGGAATAATTAAAAAACATGGGCCGATACACGTGTTAGTCAATAATGCTGGAATACTTGATGAAGACCAACCAAGAGAAATGATATTGACCAACAGCGTTGCACCGATTGAATGGTCACTAAAATTCAGAGAATACGCGAGAAACGACAAAGGTGGTCCTGGTGGAACTATTATAAATACCGCGTCCAGGTCAGGTTACAGAATAACTCCGTTCATGGTTTCCTACGTCTCATCAAAGCACGCGAGTCTAGCTTTCTCCAAGTCATTAGGACACCCATACAACTTCAAAAGAACAGGGATTAGGATTGTGGCTCTATGTCCAGAACTGACTTACACTGCGATGACTGCAAAGCAAACGGTTTGGGATGATCAGTTAGAAGATTATAAAAAAGTCGTCAAAGATGCCGTTTGGCAGAAACCCGATGTTGTCGGCAAAGCAGCTGTGCACATATTCAAGAATGCCGAATCCGGGACCGCTTGGAGAATCGCTGGTGGTCACCTGAGTGTAGCTCCAGTCTATTTATACATGACTGATGAAGAAATTGAAAAAGCTATAAAACAAAATTAA

Protein

MAVELTFLFCLVILSVRANSISDKDLKGKNVIVTGAARGIGYAIADNFLANGVNLIIILDKNVTNGVRAAETLKCKYGRGKTIFIPCDVTKDLQLWDGIIKKHGPIHVLVNNAGILDEDQPREMILTNSVAPIEWSLKFREYARNDKGGPGGTIINTASRSGYRITPFMVSYVSSKHASLAFSKSLGHPYNFKRTGIRIVALCPELTYTAMTAKQTVWDDQLEDYKKVVKDAVWQKPDVVGKAAVHIFKNAESGTAWRIAGGHLSVAPVYLYMTDEEIEKAIKQN

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JWW7   H9JWW0   H9JYK0   H9JWW1   H9JWW6   H9J8J0   + More
Q1HPX6   A0A194R949   H9J8I9   A0A194R584   H9J369   A0A0L7KQW0   A0A0H4TDA9   A0A194R4F0   H9J8I4   A0A2H1VNC8   A0A0F6Q2J9   A0A0L7LJP6   A0A2W1BR60   A0A0F6Q0W0   H9J8I5   A0A1L8D6N5   A0A212F936   A0A194QJQ6   A0A2W1BL60   A0A2A4JIR0   A0A194R3L5   A0A2W1BSK9   A0A0F6Q0X5   S4PIB4   H9J355   U5KC20   I4DKW3   A0A0H4TH26   D2SNK3   A0A212F911   H9J8I6   A0A0H4TD16   A0A0F6Q4H7   A0A2H1VSR5   A0A0L7K2F9   H9J354   A0A2H1VR53   A0A2A4JJW8   H9J353   H9J0A6   A0A2H8TFE7   A0A2S2NV02   J9JKN0   F4W474   A0A0C9R6P4   A0A026WTY5   A0A151WLU8   K7IV86   A0A232EGH1   A0A2P8Z2R9   A0A1W4WBZ1   A0A195ET92   A0A026WRA5   A0A0J7L0X1   Q6RUR3   A0A067QWG1   A0A151X1L8   E2B6N3   A0A0L7QSX6   A0A0J7L5T5   A0A140KPR8   B0XI43   A0A195B3G6   A0A195B441   A0A212F0F9   A0A154PC81   A0A194QRC6   A0A2S2R4Y7   E2A711   F4W473   A0A195ETI6   E9I9W7   A0A212F0G1   A0A158NP49   W5JA84   A0A195CLI9   A0A067R8Z3   A0A023F7A3   E2A712   A0A195E4S8   A0A310SGK5   A0A069DY58   A0A182GQQ8   A0A182FDK1   A0A088A501   A0A2A3EAR6   A0A195CI97   J9HJE4  

Pubmed

19121390    26354079    26227816    28756777    22118469    23622113    + More
24053512    22651552    20074338    21719571    24508170    20075255    28648823    29403074    30249741    24845553    20798317    21282665    21347285    20920257    23761445    25474469    26334808    26483478    17510324   

EMBL

BABH01040078    BABH01043465    BABH01044234    BABH01043464    BABH01027538    DQ443276    + More
ABF51365.1    KQ460779    KPJ12396.1    KPJ12400.1    BABH01036649    JTDY01007189    KOB65394.1    KP899549    AKQ06148.1    KPJ12399.1    BABH01027525    ODYU01003471    SOQ42306.1    KP237873    AKD01726.1    JTDY01000876    KOB75589.1    KZ149989    PZC75627.1    KP237884    AKD01737.1    BABH01027529    BABH01027530    GEYN01000013    JAV02116.1    AGBW02009651    OWR50237.1    KQ459144    KPJ03686.1    PZC75628.1    NWSH01001322    PCG71699.1    KPJ12398.1    PZC75626.1    KP237899    AKD01752.1    GAIX01005455    JAA87105.1    BABH01036642    KC007343    AGQ45608.1    AK401931    BAM18553.1    KPJ03685.1    KP899550    AKQ06149.1    EZ407131    ACX53694.1    OWR50236.1    BABH01027533    KP899551    AKQ06150.1    KP237875    AKD01728.1    ODYU01003911    SOQ43254.1    JTDY01017041    KOB51868.1    SOQ43256.1    PCG71700.1    BABH01036648    BABH01019209    GFXV01001021    MBW12826.1    GGMR01008279    MBY20898.1    ABLF02032246    ABLF02032258    GL887491    EGI71070.1    GBYB01012004    JAG81771.1    KK107119    EZA58569.1    KQ982944    KYQ48859.1    AAZX01008191    NNAY01004765    OXU17447.1    PYGN01000223    PSN50783.1    KQ981979    KYN31470.1    QOIP01000009    EZA58570.1    RLU18591.1    LBMM01001364    KMQ96442.1    AY491503    AAR84629.1    KK852879    KDR14474.1    KQ982585    KYQ54299.1    GL446000    EFN88617.1    KQ414755    KOC61725.1    LBMM01000659    KMQ97859.1    LN794625    CEO43692.1    DS233256    EDS28983.1    KQ976625    KYM79031.1    KYM79032.1    AGBW02011082    OWR47238.1    KQ434870    KZC09506.1    KQ461175    KPJ07894.1    GGMS01015878    MBY85081.1    GL437252    EFN70743.1    EGI71069.1    KYN31471.1    GL761846    EFZ22724.1    OWR47236.1    ADTU01001531    ADMH02001698    ETN61367.1    KQ977642    KYN00939.1    KK852855    KDR14911.1    GBBI01001633    JAC17079.1    EFN70744.1    KQ979609    KYN20168.1    KQ771134    OAD52542.1    GBGD01002580    JAC86309.1    JXUM01081117    KQ563228    KXJ74247.1    KZ288303    PBC28808.1    KQ977720    KYN00433.1    CH477964    EJY58014.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000007151    UP000053268    UP000218220    + More
UP000007819    UP000007755    UP000053097    UP000075809    UP000002358    UP000215335    UP000245037    UP000192223    UP000078541    UP000279307    UP000036403    UP000027135    UP000008237    UP000053825    UP000002320    UP000078540    UP000076502    UP000000311    UP000005205    UP000000673    UP000078542    UP000078492    UP000069940    UP000249989    UP000069272    UP000005203    UP000242457    UP000008820   

PRIDE

H9JWW7    H9JWW0    H9JYK0    H9JWW1    H9JWW6    H9J8J0    + More
Q1HPX6    H9J8I9    H9J369    H9J8I4    H9J8I5    H9J355    H9J8I6    H9J354    H9J353    H9J0A6   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JWW7   H9JWW0   H9JYK0   H9JWW1   H9JWW6   H9J8J0   + More
Q1HPX6   A0A194R949   H9J8I9   A0A194R584   H9J369   A0A0L7KQW0   A0A0H4TDA9   A0A194R4F0   H9J8I4   A0A2H1VNC8   A0A0F6Q2J9   A0A0L7LJP6   A0A2W1BR60   A0A0F6Q0W0   H9J8I5   A0A1L8D6N5   A0A212F936   A0A194QJQ6   A0A2W1BL60   A0A2A4JIR0   A0A194R3L5   A0A2W1BSK9   A0A0F6Q0X5   S4PIB4   H9J355   U5KC20   I4DKW3   A0A0H4TH26   D2SNK3   A0A212F911   H9J8I6   A0A0H4TD16   A0A0F6Q4H7   A0A2H1VSR5   A0A0L7K2F9   H9J354   A0A2H1VR53   A0A2A4JJW8   H9J353   H9J0A6   A0A2H8TFE7   A0A2S2NV02   J9JKN0   F4W474   A0A0C9R6P4   A0A026WTY5   A0A151WLU8   K7IV86   A0A232EGH1   A0A2P8Z2R9   A0A1W4WBZ1   A0A195ET92   A0A026WRA5   A0A0J7L0X1   Q6RUR3   A0A067QWG1   A0A151X1L8   E2B6N3   A0A0L7QSX6   A0A0J7L5T5   A0A140KPR8   B0XI43   A0A195B3G6   A0A195B441   A0A212F0F9   A0A154PC81   A0A194QRC6   A0A2S2R4Y7   E2A711   F4W473   A0A195ETI6   E9I9W7   A0A212F0G1   A0A158NP49   W5JA84   A0A195CLI9   A0A067R8Z3   A0A023F7A3   E2A712   A0A195E4S8   A0A310SGK5   A0A069DY58   A0A182GQQ8   A0A182FDK1   A0A088A501   A0A2A3EAR6   A0A195CI97   J9HJE4  

PDB

2GDZ     E-value=3.511e-23,     Score=266

KEGG

101737635    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0016491   GO:0004022   GO:0004616   GO:0051287   GO:0008442   GO:0006284   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824  

SignalP

Position:   1 - 18,         Likelihood:  0.980633

 

 

Length:

285

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.11483

Exp number, first 60 AAs:

0.99578

Total prob of N-in:

0.02551

outside

1  -  285

 

 

Pi

157.36711

Theta

142.633354

Tajima's D

0.260816

CLR

0

CSRT

0.44402779861007

Interpretation

Uncertain