Gene

KWMTBOMO10560  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014025

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14118329-14119297      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.679

CDS

ATGGCTGTAGAGTTAACGTTTCTATTTTGCCTAGTAATACTTTCGGTTAGGGCCAATTCAATCAGTGACAAGGATCTAAAAGGTAAAAATGTTATCGTAACCGGGGCAGCTAGAGGTATAGGATACGCTATAGCTGATAATTTCCTAGCTAATGGAGTCAATCAAATTATAATCTTAGATAGAAATGTGACTAACGGAGTAAGAGCAGCTGAAACTCTGAAATGTAAATATGGAAGAGATAAGGTTATTTTTATACTATGCGATGTTACAAAAGATCGTCATCTGTGGGGTGACATAGTTGACGAGCATGGGCCGATACATGTGCTAGTCAACAATGCTGGAATACTTGAAGAAGACCAACCAAGAGAAATGATATTGACCAACAGCGTTGCACCGATTGAATGGTCATTAAAATTCAGAGAATACGCGAGAAACGACAAAGGTGGTCCTGGTGGAACTATCGTAAACATCGCGTCCATTTCAGGTTACACTATATTCCCGTTCATGGTTTCCTATGTCTCATCAAAGCATGCAAGTCTAGCTTTCTCCAAGTCATTAGGACACCCATACAACTTCAAAAAGACAGGAATCAGGATTGTGGCTCTATGTCCAGGCTTGACCTACACTGCGATGACTGCAAAGCAAATGGCTTGGGATGACCAGTTGGAAGATTTTAAAAAAGTAACCAAGGATGACGTTTGGCAGGAACCCGATGCTGTTGGCAAAGCAGCCGTACACATATTCAAGAATGCCGAGTCCGGGACCGCTTGGAAAATCACTGGTGGTCAACTGAGTGTAGCTCCAGAGTATTTATACATGACTGATGAAGAAATTGAAAACGCGTTAAATTAA

Protein

MAVELTFLFCLVILSVRANSISDKDLKGKNVIVTGAARGIGYAIADNFLANGVNQIIILDRNVTNGVRAAETLKCKYGRDKVIFILCDVTKDRHLWGDIVDEHGPIHVLVNNAGILEEDQPREMILTNSVAPIEWSLKFREYARNDKGGPGGTIVNIASISGYTIFPFMVSYVSSKHASLAFSKSLGHPYNFKKTGIRIVALCPGLTYTAMTAKQMAWDDQLEDFKKVTKDDVWQEPDAVGKAAVHIFKNAESGTAWKITGGQLSVAPEYLYMTDEEIENALN

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JWW1   H9JWW0   H9JYK0   H9JWW7   H9JWW6   H9J8J0   + More
H9J369   Q1HPX6   A0A0L7KQW0   H9J8I9   A0A194R949   H9J8I4   A0A194R584   A0A194R4F0   A0A0H4TDA9   H9J8I5   A0A0L7LJP6   A0A194QJQ6   A0A1L8D6N5   A0A2W1BR60   A0A0F6Q2J9   A0A2H1VNC8   A0A0F6Q0W0   A0A2W1BL60   A0A2A4JIR0   A0A2W1BSK9   A0A212F936   H9J355   A0A0F6Q0X5   S4PIB4   U5KC20   A0A194R3L5   D2SNK3   A0A0H4TD16   I4DKW3   A0A212F911   H9J8I6   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J354   A0A2H1VR53   A0A0L7K2F9   A0A2A4JJW8   H9J353   H9J0A6   A0A151WLU8   A0A0J7NFD4   A0A194QRC6   B0XI43   K7IV86   A0A232EGH1   A0A212F0G1   E9IVH7   A0A3G1T1B2   A0A2P8Z2R9   F4WL42   A0A195ET92   A0A158NZK6   A0A195CI97   F4W474   J9HJE4   A0A0J7L0X1   W5JA84   A0A2H8TFE7   A0A195EKM2   A0A2S2NV02   A0A067QWG1   A0A195B6A6   J9EB03   J9JKN0   A0A0C9R6P4   A0A195FBJ6   A0A1W4WBZ1   A0A194QE27   A0A195B3G6   A0A151XEI7   A0A026WRA5   A0A310SGK5   A0A195EK98   A0A154PC81   A0A0J7L5T5   B0XCJ1   E2BHN0   A0A1S4G7W1   F4W473   A0A224XI56   A0A195ETI6   A0A182FDK1   A0A158NDP0   A0A026WTY5   E9IYV8   A0A212F0F9   E2A712   A0A151X1L8  

Pubmed

19121390    26227816    26354079    28756777    22118469    23622113    + More
24053512    20074338    22651552    20075255    28648823    21282665    29403074    21719571    21347285    17510324    20920257    23761445    24845553    24508170    30249741    20798317   

EMBL

BABH01043464    BABH01043465    BABH01044234    BABH01040078    BABH01027538    BABH01036649    + More
DQ443276    ABF51365.1    JTDY01007189    KOB65394.1    KQ460779    KPJ12396.1    BABH01027525    KPJ12400.1    KPJ12399.1    KP899549    AKQ06148.1    BABH01027529    BABH01027530    JTDY01000876    KOB75589.1    KQ459144    KPJ03686.1    GEYN01000013    JAV02116.1    KZ149989    PZC75627.1    KP237873    AKD01726.1    ODYU01003471    SOQ42306.1    KP237884    AKD01737.1    PZC75628.1    NWSH01001322    PCG71699.1    PZC75626.1    AGBW02009651    OWR50237.1    BABH01036642    KP237899    AKD01752.1    GAIX01005455    JAA87105.1    KC007343    AGQ45608.1    KPJ12398.1    EZ407131    ACX53694.1    KP899551    AKQ06150.1    AK401931    BAM18553.1    KPJ03685.1    OWR50236.1    BABH01027533    KP899550    AKQ06149.1    ODYU01003911    SOQ43254.1    KP237875    AKD01728.1    SOQ43256.1    JTDY01017041    KOB51868.1    PCG71700.1    BABH01036648    BABH01019209    KQ982944    KYQ48859.1    LBMM01005734    KMQ91250.1    KQ461175    KPJ07894.1    DS233256    EDS28983.1    AAZX01008191    NNAY01004765    OXU17447.1    AGBW02011082    OWR47236.1    GL766234    EFZ15444.1    MG846919    AXY94771.1    PYGN01000223    PSN50783.1    GL888207    EGI65005.1    KQ981979    KYN31470.1    ADTU01004714    KQ977720    KYN00433.1    GL887491    EGI71070.1    CH477964    EJY58014.1    LBMM01001364    KMQ96442.1    ADMH02001698    ETN61367.1    GFXV01001021    MBW12826.1    KQ978747    KYN28686.1    GGMR01008279    MBY20898.1    KK852879    KDR14474.1    KQ976587    KYM79714.1    CH477766    EJY57916.1    ABLF02032246    ABLF02032258    GBYB01012004    JAG81771.1    KQ981685    KYN37995.1    KQ459302    KPJ01716.1    KQ976625    KYM79031.1    KQ982254    KYQ58773.1    KK107119    QOIP01000009    EZA58570.1    RLU18591.1    KQ771134    OAD52542.1    KYN28685.1    KQ434870    KZC09506.1    LBMM01000659    KMQ97859.1    DS232698    EDS44853.1    GL448322    EFN84778.1    EGI71069.1    GFTR01004259    JAW12167.1    KYN31471.1    ADTU01012731    EZA58569.1    GL767051    EFZ14253.1    OWR47238.1    GL437252    EFN70744.1    KQ982585    KYQ54299.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000218220    UP000007151    + More
UP000075809    UP000036403    UP000002320    UP000002358    UP000215335    UP000245037    UP000007755    UP000078541    UP000005205    UP000078542    UP000008820    UP000000673    UP000078492    UP000027135    UP000078540    UP000007819    UP000192223    UP000053097    UP000279307    UP000076502    UP000008237    UP000069272    UP000000311   

PRIDE

H9JWW1    H9JWW0    H9JYK0    H9JWW7    H9JWW6    H9J8J0    + More
H9J369    Q1HPX6    H9J8I9    H9J8I4    H9J8I5    H9J355    H9J8I6    H9J354    H9J353    H9J0A6   

Pfam

PF00106   adh_short

Interpro

IPR020904   Sc_DH/Rdtase_CS        + More
IPR002347   SDR_fam       
IPR036291   NAD(P)-bd_dom_sf       
IPR006883   AcMNPV_PIF-4       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JWW1   H9JWW0   H9JYK0   H9JWW7   H9JWW6   H9J8J0   + More
H9J369   Q1HPX6   A0A0L7KQW0   H9J8I9   A0A194R949   H9J8I4   A0A194R584   A0A194R4F0   A0A0H4TDA9   H9J8I5   A0A0L7LJP6   A0A194QJQ6   A0A1L8D6N5   A0A2W1BR60   A0A0F6Q2J9   A0A2H1VNC8   A0A0F6Q0W0   A0A2W1BL60   A0A2A4JIR0   A0A2W1BSK9   A0A212F936   H9J355   A0A0F6Q0X5   S4PIB4   U5KC20   A0A194R3L5   D2SNK3   A0A0H4TD16   I4DKW3   A0A212F911   H9J8I6   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J354   A0A2H1VR53   A0A0L7K2F9   A0A2A4JJW8   H9J353   H9J0A6   A0A151WLU8   A0A0J7NFD4   A0A194QRC6   B0XI43   K7IV86   A0A232EGH1   A0A212F0G1   E9IVH7   A0A3G1T1B2   A0A2P8Z2R9   F4WL42   A0A195ET92   A0A158NZK6   A0A195CI97   F4W474   J9HJE4   A0A0J7L0X1   W5JA84   A0A2H8TFE7   A0A195EKM2   A0A2S2NV02   A0A067QWG1   A0A195B6A6   J9EB03   J9JKN0   A0A0C9R6P4   A0A195FBJ6   A0A1W4WBZ1   A0A194QE27   A0A195B3G6   A0A151XEI7   A0A026WRA5   A0A310SGK5   A0A195EK98   A0A154PC81   A0A0J7L5T5   B0XCJ1   E2BHN0   A0A1S4G7W1   F4W473   A0A224XI56   A0A195ETI6   A0A182FDK1   A0A158NDP0   A0A026WTY5   E9IYV8   A0A212F0F9   E2A712   A0A151X1L8  

PDB

2GDZ     E-value=6.65337e-24,     Score=272

KEGG

101745452    no KO assigned | (RefSeq) 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like

GO

GO:0016491   GO:0004022   GO:0004616   GO:0051287   GO:0008442   GO:0006284   GO:0003906   GO:0005634   GO:0006285   GO:0019104   GO:0003824  

SignalP

Position:   1 - 18,         Likelihood:  0.980272

 

 

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.25356

Exp number, first 60 AAs:

1.94645

Total prob of N-in:

0.09578

outside

1  -  283

 

 

Pi

253.639977

Theta

157.621897

Tajima's D

1.848829

CLR

0.17276

CSRT

0.857457127143643

Interpretation

Uncertain