Gene

KWMTBOMO10559  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014620

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr17(-):14101968-14102967      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.327

CDS

ATGGCTATAGAGTTAAAGTTTCTAGTTTGCCTAGTAACACTTTCGGCTAGGGCCAATTCAATCAGTGACAAGGATCTAAAAGGTAAAAATGTCATCGTGACCGGGGCAGCTAGAGGTATAGGATACGCTATAGCTGATAATTTCCTAGCTAATGGAGTCAATCAAATTATAATCTTAGATAAAAATGTGACTAACGGAATAAGAGCAGCTGAAACTCTGAAATGTAAATATGGAAGAGATAAGGTTATTTTTATACCATGCGATGTTACCAAAGATCTTCATCTGTGGGATGATATAGTTGACGAGCATGGGCCGATACATGTGTTAGTCAACAATGCTGGAATACTTGAAGAAGACCAACCAAGAGAAATGATATTGACCAATAGCGTTGCACCGATTGAATGGTCATTAAAATTCAGAGAATACGCGAGAAACGATAAAGGTGGTCCTGGTGGAACTATTGTTAACATCGCGTCCGATTCAGGTTACAGTATAACCCCGTTTATGGTTTCCTACATCTCATCAAAGCATGCGAGTCTCGCTTTCTCCAAGTCATTAGGACACCCATACAACTTCAAAAGGACAGGAATCAAGATTGTGGCTCTATGTCCAGAATTGACTTACACTGCGATGACTGCAGAGCAAATGGTTTGGGATGATCAGTTGGAAGATTTAAAAAAGGTAACCAAGCATGACGTTTGGCAGGAACCCGATGCTGTCGGCAAAGCAGCCGTACACATATTCAAGAATGCCGAGTCCGGGACCGCTTGGAAAATCACTGGTGGTCAACTGAGTGTAGCTCCAGAGTATTTATACATGACTGATGAAGAAATTGAAAACGCGTTAAATTAA

Protein

MAIELKFLVCLVTLSARANSISDKDLKGKNVIVTGAARGIGYAIADNFLANGVNQIIILDKNVTNGIRAAETLKCKYGRDKVIFIPCDVTKDLHLWDDIVDEHGPIHVLVNNAGILEEDQPREMILTNSVAPIEWSLKFREYARNDKGGPGGTIVNIASDSGYSITPFMVSYISSKHASLAFSKSLGHPYNFKRTGIKIVALCPELTYTAMTAEQMVWDDQLEDLKKVTKHDVWQEPDAVGKAAVHIFKNAESGTAWKITGGQLSVAPEYLYMTDEEIENALN

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JYK0   H9JWW0   H9JWW1   H9JWW7   H9JWW6   H9J8J0   + More
Q1HPX6   H9J8I9   H9J369   A0A194R949   A0A194R584   H9J8I4   A0A0L7KQW0   A0A194R4F0   H9J8I5   A0A0H4TDA9   A0A0L7LJP6   A0A194QJQ6   A0A212F936   A0A1L8D6N5   H9J355   A0A2H1VNC8   A0A2W1BR60   A0A0F6Q2J9   S4PIB4   A0A0F6Q0W0   A0A194R3L5   A0A2A4JIR0   I4DKW3   A0A2W1BSK9   A0A2W1BL60   A0A0F6Q0X5   U5KC20   A0A0H4TD16   D2SNK3   H9J8I6   A0A212F911   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J354   A0A2H1VR53   A0A0L7K2F9   A0A2A4JJW8   H9J353   H9J0A6   A0A151WLU8   A0A212F0G1   A0A0L7QSX6   K7IV86   A0A232EGH1   A0A0C9R6P4   F4W474   A0A194QRC6   B0XI43   A0A2H8TFE7   A0A2S2NV02   J9JKN0   A0A0J7L0X1   A0A195ET92   A0A154PC81   A0A158NZK6   A0A067QWG1   A0A195B3G6   A0A0J7NFD4   A0A0J7L5T5   A0A2P8Z2R9   A0A026WRA5   A0A026WTY5   E9IVH7   A0A195ETI6   A0A151X1L8   F4W473   J9HJE4   A0A195B6A6   E2B6N3   A0A195CLI9   A0A158NP49   F4WL42   A0A310SGK5   E2A712   E0VAP2   A0A195B441   E2BHN0   W5JA84   A0A194QE27   A0A195E4S8   A0A1S4G7W1   A0A195FBJ6   A0A195EKM2   Q6RUR3   A0A1W4WBZ1   A0A195CI97   J9EB03   E9I9W7  

Pubmed

19121390    26354079    26227816    22118469    28756777    23622113    + More
22651552    24053512    20074338    20075255    28648823    21719571    21347285    24845553    29403074    24508170    30249741    21282665    17510324    20798317    20566863    20920257    23761445   

EMBL

BABH01044234    BABH01043465    BABH01043464    BABH01040078    BABH01027538    DQ443276    + More
ABF51365.1    BABH01036649    KQ460779    KPJ12396.1    KPJ12400.1    BABH01027525    JTDY01007189    KOB65394.1    KPJ12399.1    BABH01027529    BABH01027530    KP899549    AKQ06148.1    JTDY01000876    KOB75589.1    KQ459144    KPJ03686.1    AGBW02009651    OWR50237.1    GEYN01000013    JAV02116.1    BABH01036642    ODYU01003471    SOQ42306.1    KZ149989    PZC75627.1    KP237873    AKD01726.1    GAIX01005455    JAA87105.1    KP237884    AKD01737.1    KPJ12398.1    NWSH01001322    PCG71699.1    AK401931    BAM18553.1    KPJ03685.1    PZC75626.1    PZC75628.1    KP237899    AKD01752.1    KC007343    AGQ45608.1    KP899551    AKQ06150.1    EZ407131    ACX53694.1    BABH01027533    OWR50236.1    KP899550    AKQ06149.1    ODYU01003911    SOQ43254.1    KP237875    AKD01728.1    SOQ43256.1    JTDY01017041    KOB51868.1    PCG71700.1    BABH01036648    BABH01019209    KQ982944    KYQ48859.1    AGBW02011082    OWR47236.1    KQ414755    KOC61725.1    AAZX01008191    NNAY01004765    OXU17447.1    GBYB01012004    JAG81771.1    GL887491    EGI71070.1    KQ461175    KPJ07894.1    DS233256    EDS28983.1    GFXV01001021    MBW12826.1    GGMR01008279    MBY20898.1    ABLF02032246    ABLF02032258    LBMM01001364    KMQ96442.1    KQ981979    KYN31470.1    KQ434870    KZC09506.1    ADTU01004714    KK852879    KDR14474.1    KQ976625    KYM79031.1    LBMM01005734    KMQ91250.1    LBMM01000659    KMQ97859.1    PYGN01000223    PSN50783.1    KK107119    QOIP01000009    EZA58570.1    RLU18591.1    EZA58569.1    GL766234    EFZ15444.1    KYN31471.1    KQ982585    KYQ54299.1    EGI71069.1    CH477964    EJY58014.1    KQ976587    KYM79714.1    GL446000    EFN88617.1    KQ977642    KYN00939.1    ADTU01001531    GL888207    EGI65005.1    KQ771134    OAD52542.1    GL437252    EFN70744.1    DS235012    EEB10448.1    KYM79032.1    GL448322    EFN84778.1    ADMH02001698    ETN61367.1    KQ459302    KPJ01716.1    KQ979609    KYN20168.1    KQ981685    KYN37995.1    KQ978747    KYN28686.1    AY491503    AAR84629.1    KQ977720    KYN00433.1    CH477766    EJY57916.1    GL761846    EFZ22724.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000007151    UP000218220    + More
UP000075809    UP000053825    UP000002358    UP000215335    UP000007755    UP000002320    UP000007819    UP000036403    UP000078541    UP000076502    UP000005205    UP000027135    UP000078540    UP000245037    UP000053097    UP000279307    UP000008820    UP000008237    UP000078542    UP000000311    UP000009046    UP000000673    UP000078492    UP000192223   

PRIDE

H9JYK0    H9JWW0    H9JWW1    H9JWW7    H9JWW6    H9J8J0    + More
Q1HPX6    H9J8I9    H9J369    H9J8I4    H9J8I5    H9J355    H9J8I6    H9J354    H9J353    H9J0A6   

Pfam

PF00106   adh_short

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
IPR006883   AcMNPV_PIF-4       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JYK0   H9JWW0   H9JWW1   H9JWW7   H9JWW6   H9J8J0   + More
Q1HPX6   H9J8I9   H9J369   A0A194R949   A0A194R584   H9J8I4   A0A0L7KQW0   A0A194R4F0   H9J8I5   A0A0H4TDA9   A0A0L7LJP6   A0A194QJQ6   A0A212F936   A0A1L8D6N5   H9J355   A0A2H1VNC8   A0A2W1BR60   A0A0F6Q2J9   S4PIB4   A0A0F6Q0W0   A0A194R3L5   A0A2A4JIR0   I4DKW3   A0A2W1BSK9   A0A2W1BL60   A0A0F6Q0X5   U5KC20   A0A0H4TD16   D2SNK3   H9J8I6   A0A212F911   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J354   A0A2H1VR53   A0A0L7K2F9   A0A2A4JJW8   H9J353   H9J0A6   A0A151WLU8   A0A212F0G1   A0A0L7QSX6   K7IV86   A0A232EGH1   A0A0C9R6P4   F4W474   A0A194QRC6   B0XI43   A0A2H8TFE7   A0A2S2NV02   J9JKN0   A0A0J7L0X1   A0A195ET92   A0A154PC81   A0A158NZK6   A0A067QWG1   A0A195B3G6   A0A0J7NFD4   A0A0J7L5T5   A0A2P8Z2R9   A0A026WRA5   A0A026WTY5   E9IVH7   A0A195ETI6   A0A151X1L8   F4W473   J9HJE4   A0A195B6A6   E2B6N3   A0A195CLI9   A0A158NP49   F4WL42   A0A310SGK5   E2A712   E0VAP2   A0A195B441   E2BHN0   W5JA84   A0A194QE27   A0A195E4S8   A0A1S4G7W1   A0A195FBJ6   A0A195EKM2   Q6RUR3   A0A1W4WBZ1   A0A195CI97   J9EB03   E9I9W7  

PDB

2GDZ     E-value=7.48212e-22,     Score=255

KEGG

101736739    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0016491   GO:0004022   GO:0016404  

SignalP

Position:   1 - 18,         Likelihood:  0.943969

 

 

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0653

Exp number, first 60 AAs:

0.04928

Total prob of N-in:

0.01245

outside

1  -  283

 

 

Pi

260.957078

Theta

191.2983

Tajima's D

1.126921

CLR

93.85844

CSRT

0.699565021748913

Interpretation

Uncertain