SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10557
Pre Gene Modal
BGIBMGA007143
Annotation
PREDICTED:_sulfotransferase_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.563 Mitochondrial   Reliability : 1.212
 

Sequence

CDS
ATGCCAGCCAAGATGGGTCCTCAAATCGTTCTGCCATACGACATAGAAGACGTCACGGCAGACGAGGATAAAATAATAAAAAGGTGCTTATTAGGCTACACCAGACCATTCGTGAAATGCGGTAAGAAGGGCTACGTGATGCCGGGCGCGTTCAGGAAACACGCAGATGCCATCTACAACATGAAAGTTAGACCCGATGATATTTGGGTCATCACTTTCCCGAGATCAGGTACAACGTGGACGCAAGAATTAATTTGGCTGGTGGAAAATAATTTGAATTATAACGCTGCAAGAGAACGACCCCTTTACGAAAGATTTCCAATGCTAGAAACAACCAGCCAGATACCGGAAATAGCGTACGAGTTCATAAAAGCGAATTTCATGAATTTGGGCAGCTTCCAAGGGCTTACGGAAGCGGCCCGGTACCCTAGCTGGAAGATGATAGAGGAGATGCCTTCCCCGAGATTCATAAAGACACACCTGCCACTATCCCTTCTGCCGCCGACCCTGCTGGAGACGGCAAAGGTCGTGTACGTGGCCAGGGATCCAAGGGATGTTGTGGTTTCATATTATTATCTACACAAAATGGTCAGCAAGCATTTGATGAGGGCTACGTTTCACGACTTCTGGGAGGCCTTCAGACGAGATCTGTTACCTTGGACCCCAATAGTAGCACACACAAACGAGGCCTGGGTCCATCGATACCATCCGAACATGCACTTTGTGTTTTATGAAGATATGATTAAGGATCTGCCCAAGGAAATCCGTCGAGTCTGTAAGTTCTTGCAGAGGTACTACACGGACGACCAAGTGAAGGCGCTCTCAGAGCATCTCAGTTTTGAGAGCTTAAGAAAAAACAAGAATGTTAACAATACTACCGGCGAAGAGAATAATGGAGTGCAGTTTGTAAGGAAAGGTGAAGCCGGTGGTTGGAAGTCGCATTTTGACGAAGTGATGACGTCACAAGCCGAAGACTTCCTCATATCGCGACTGAAAGGTCTAGATCTCGTGTACCCGTCGTTGGAAAACGGGGAGACCACACATCTATAG
Protein
MPAKMGPQIVLPYDIEDVTADEDKIIKRCLLGYTRPFVKCGKKGYVMPGAFRKHADAIYNMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLETTSQIPEIAYEFIKANFMNLGSFQGLTEAARYPSWKMIEEMPSPRFIKTHLPLSLLPPTLLETAKVVYVARDPRDVVVSYYYLHKMVSKHLMRATFHDFWEAFRRDLLPWTPIVAHTNEAWVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKALSEHLSFESLRKNKNVNNTTGEENNGVQFVRKGEAGGWKSHFDEVMTSQAEDFLISRLKGLDLVYPSLENGETTHL

Summary

EMBL
BABH01015133    AB237160    BAE46394.1    NWSH01000133    PCG79209.1    GDQN01007833    + More
JAT83221.1    KQ460124    KPJ17660.1    KQ459603    KPI93144.1    ODYU01000337    SOQ34912.1    AGBW02008469    OWR53272.1    HM449927    ADO33062.1    ODYU01003367    SOQ42038.1    JTDY01001067    KOB74975.1    PCG79208.1    BABH01015119    BABH01015120    AB284983    BAF37537.1    DQ443407    ABF51496.1    ODYU01007908    SOQ51100.1    AK401464    BAM18086.1    KPJ17661.1    AGBW02008382    OWR53534.1    KPI93145.1    KQ461198    KPJ06275.1    BABH01008529    BABH01008530    BABH01008531    ODYU01000444    SOQ35226.1    KQ458793    KPJ05084.1    KQ460458    KPJ14654.1    KQ414905    KOC59625.1    ODYU01012890    SOQ59422.1    KZ288232    PBC31513.1    NEVH01000613    PNF43242.1    ODYU01007663    SOQ50641.1    ODYU01005448    SOQ46321.1    KPJ05081.1    RSAL01000015    RVE53120.1    NWSH01000001    PCG81090.1    GEDC01013553    JAS23745.1    NNAY01000980    OXU25629.1    PCG81089.1    AAZX01000018    KQ978068    KYM97385.1    GBYB01015302    JAG85069.1    OWR53536.1    GL888030    EGI69148.1    U28654    AAC47136.1    KPJ06273.1    GFTR01005206    JAW11220.1    RSAL01000014    RVE53184.1    GL439579    EFN66998.1    KK853064    KDR11875.1    LADJ01060126    KPJ21606.1    KT000403    ANI86001.1    KPJ05082.1    GBHO01044077    GBRD01004179    GDHC01002349    JAF99526.1    JAG61642.1    JAQ16280.1    GBGD01002073    JAC86816.1    GL732540    EFX82151.1    SOQ50640.1    GECL01001637    JAP04487.1    GFTR01005203    JAW11223.1    OWR53535.1    KQ980849    KYN12229.1    GECL01002505    JAP03619.1    KQ977444    KYN02703.1    GFTR01005158    JAW11268.1    KPJ05083.1    GFTR01005326    JAW11100.1    KQ435922    KOX68659.1    GBGD01002083    JAC86806.1    GL448783    EFN83859.1    KQ982907    KYQ49408.1    KQ976806    KYN08201.1    BABH01015125    GDIP01231190    GDIP01183245    JAJ40157.1    GDIP01184591    JAJ38811.1    GDIP01183247    JAJ40155.1    EFN83857.1    GDIP01183246    GDIP01181589    JAJ41813.1    KQ980322    KYN16645.1    GDIQ01244754    GDIQ01130895    JAK06971.1    GDIQ01162738    GDIP01068402    GDIP01064206    JAK88987.1    JAM39509.1    GDIP01152046    GDIP01049010    JAM54705.1    GDIP01176136    JAJ47266.1    GDIP01054767    JAM48948.1    GFTR01004803    JAW11623.1    GDIQ01168270    GDIQ01091393    JAK83455.1    LRGB01000687    KZS16634.1    GDIP01136443    JAL67271.1    GDIQ01267718    GDIQ01143331    GDIQ01109342    GDIQ01097394    JAL08395.1    GFTR01005205    JAW11221.1    GDIQ01097393    JAL54333.1    GDIQ01244755    GDIQ01129591    GDIQ01044578    JAN50159.1    GDIQ01169122    GDIQ01066475    JAK82603.1    QOIP01000001    RLU26620.1    GBGD01002074    JAC86815.1    GDIP01179738    JAJ43664.1    GDIQ01076601    JAN18136.1    GBBI01001612    JAC17100.1   
Pfam
PF00685   Sulfotransfer_1        + More
PF00096   zf-C2H2
Interpro
IPR027417   P-loop_NTPase        + More
IPR000863   Sulfotransferase_dom       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF52540   SSF52540        + More
SSF57667   SSF57667       
PDB
1X8L     E-value=3.81201e-60,     Score=586

Ontologies

Topology

Length:
349
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00189
Exp number, first 60 AAs:
0.00011
Total prob of N-in:
0.00777
outside
1  -  349
 
 

Population Genetic Test Statistics

Pi
169.776679
Theta
149.987367
Tajima's D
0.207709
CLR
0.055464
CSRT
0.425878706064697
Interpretation
Uncertain
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