Silkworm Genome Informatics Database

Gene

KWMTBOMO10539

Pre Gene Modal

BGIBMGA006979

Annotation

PREDICTED:_uncharacterized_protein_LOC106142693_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr17(-):13579953-13584041 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.427

CDS

ATGGCCGAGGAAGACGAAATCGATATTTTAGGGGATTTTTCATTCAATTCATGCTTTGCACAAAATAACCAAGGAATTCCTTCTTGCTCCAGCAGAGAGGACACGGTACATCCTCAATGGTTGTTAGACTCCACAGAAACGAATTGGTATGATAAAAATAAAGATAAAAACATCAAAGATGGACCATATCGAAAACTACTTGGAAATAGTTCGTCTAGAAAGTACAACAATAACACCCATACAGAATGGAGTAAAAATGAAAGACAGATACTTGTTATGGAAATGGCTAAGTTTGGTAGAAATATTAAAAAGATATCACAGACATTAAAAACAAAAACTGAAGCAGAAATACAAGCAATGATTGAGGCTGAATTTGGTGTAATGTTAGAGTCATCTTTGCCAGGGCTGGAAAAAAATGAAGAGCAGTATGACATGCCTACAGTTGCCCAAGAAGAAATAGTCACAGCAGAGTTAAACACGCGTAGTGCTAGTGCTGATAAAACAAAACAAAATAAAAATAAAAATTATCGAAAAAAATACCCTAAATCAAAGAACATAATACTAAAACCCAACCTCACAAATGAAATGAAACCTGGTATAGAATCATCGGAAATAATTTATGAAGATGATTTAATTGTTGGCTCAACTGAATCAATTGGTTCTGATCTGGAATTGACAGACATAGTTTCTAAGAATGTGGCTAAACACCAAGCGAAAGGTAAAGTGGAGAGAAAAATTGGAAATCACAGAAGGAAAGTGTCAAGGAATTATGATAAAAAGCCCAGAAACAAAAGTAAAGAGTTAAAATCTCCACAGGGCAGACAGAGGAAGAACTCTAGCTTGTCTGACGATAGTGTTAAAAGTCCTAAAATGCAGTTATTGTTGGGTTCTGGACAAGCTTTGCCGATTTCTGAAGGAGAACAAGTGATAAAAATAGAGAAGAAGAAAGACTCTGAGCCAGAAAGTGATATAGACATTGATGTAGATAGCGACAGTGAAGCAAAACAGAAAAAACCAAAGACCATAACTAAAGACGATGATGCGCCGATAGTTGTACCTCTAGAGAACTTTGAACCGATGCCCAGAAGACAGAAGAAAATAAATTTGGGCGGGGGTGGTGGGTACACAATAATGCACACGGAGGCCGGGGACCTGTACCGGGTACAGGCGGAGCCGCGCAGGGAGCGCGCGCCGCGCCGCCCGCCCATACACCTCATGCAGTGCCGCGTCTACAGCGCCGAGAGGCCGGCGCCGTTCGAGGTCGAGCTACACGTGTCTGCGCTGCTGGCCATGGACGCGCACGCGCACTCGTCGCGCGCCGAGGTCATGGGGCTGGTGGGCGGACACGTGCGGGGCCGCGTGCTCGCCGTCACCGCCTACCGACCCACCGCCGCCGCCGCCGGCGCCACGCACTGCGAGATGGACCCAGGTGTGTAG

Protein

MAEEDEIDILGDFSFNSCFAQNNQGIPSCSSREDTVHPQWLLDSTETNWYDKNKDKNIKDGPYRKLLGNSSSRKYNNNTHTEWSKNERQILVMEMAKFGRNIKKISQTLKTKTEAEIQAMIEAEFGVMLESSLPGLEKNEEQYDMPTVAQEEIVTAELNTRSASADKTKQNKNKNYRKKYPKSKNIILKPNLTNEMKPGIESSEIIYEDDLIVGSTESIGSDLELTDIVSKNVAKHQAKGKVERKIGNHRRKVSRNYDKKPRNKSKELKSPQGRQRKNSSLSDDSVKSPKMQLLLGSGQALPISEGEQVIKIEKKKDSEPESDIDIDVDSDSEAKQKKPKTITKDDDAPIVVPLENFEPMPRRQKKINLGGGGGYTIMHTEAGDLYRVQAEPRRERAPRRPPIHLMQCRVYSAERPAPFEVELHVSALLAMDAHAHSSRAEVMGLVGGHVRGRVLAVTAYRPTAAAAGATHCEMDPGV

Uniprot

H9JBT4 A0A2A4JTG7 A0A2A4JT23 A0A2H1VBS3 A0A2A4JRX9 A0A3S2P0X3 + More
A0A1E1WK75 A0A194PK73 A0A0N1IDL7 A0A1E1W598 A0A212EI38 A0A0L7L0R6 A0A2A4JTP2 A0A1E1WF39 D6X384 A0A0T6B9F6

Pubmed

19121390 26354079 22118469 26227816 18362917 19820115 + More

EMBL

BABH01015089 BABH01015090 NWSH01000689 PCG74763.1 PCG74764.1 ODYU01001709 + More
SOQ38289.1 PCG74761.1 RSAL01000062 RVE49544.1 GDQN01003635 JAT87419.1 KQ459603 KPI93129.1 KQ460711 KPJ12694.1 GDQN01008914 JAT82140.1 AGBW02014713 OWR41144.1 JTDY01003890 KOB68869.1 PCG74762.1 GDQN01005440 JAT85614.1 KQ971372 EFA09787.2 LJIG01009039 KRT83877.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000053240 UP000007151 + More
UP000037510 UP000007266

PRIDE

H9JBT4

Pfam

PF01398   JAB        + More
PF14464   Prok-JAB
PF04433   SWIRM

Interpro

IPR037518   MPN        + More
IPR009057   Homeobox-like_sf
IPR000555   JAMM/MPN+_dom
IPR033497   MYSM1
IPR001005   SANT/Myb
IPR028090   JAB_dom_prok
IPR007526   SWIRM
IPR017884   SANT_dom

SUPFAM

SSF46689 SSF46689

CDD

cd00167 SANT

ProteinModelPortal

H9JBT4 A0A2A4JTG7 A0A2A4JT23 A0A2H1VBS3 A0A2A4JRX9 A0A3S2P0X3 + More
A0A1E1WK75 A0A194PK73 A0A0N1IDL7 A0A1E1W598 A0A212EI38 A0A0L7L0R6 A0A2A4JTP2 A0A1E1WF39 D6X384 A0A0T6B9F6

KEGG

101746781 K11865 protein MYSM1 | (RefSeq) histone H2A deubiquitinase MYSM1-like

GO

GO:0004843 GO:0003677 GO:0035522 GO:0003713 GO:0006338 GO:0045944 GO:0005634 GO:0042393 GO:0008237 GO:0008270 GO:0051539 GO:0006284 GO:0003906 GO:0006285 GO:0019104 GO:0003824

PANTHER

PTHR12802:SF67

Subcellular location

Nucleus

Length:

478

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00109

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00119

outside

1 - 478

Pi

30.848673

Theta

25.651882

Tajima's D

0.242332

CLR

0.439426

CSRT

0.435878206089696

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics