SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10538
Pre Gene Modal
BGIBMGA006979
Annotation
PREDICTED:_uncharacterized_protein_LOC106142693_isoform_X2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 1.727
 

Sequence

CDS
ATGGCGGCGGAGAGCCTGTGCGCGGCGGGCGCGGCGGCGTGCGGCTGGCACCACTCGCACCCCGCCAGCGCTGCGCGGCCCTCCGCCCGCGACCTGCGCACGCAGCGCGCCCTGCAGCGGGCCCTGCGCCGCCCCTTCCTCGCGCTCATCACCTCCCCGCACTGGCCCCCGGGCCGCACCGCCTCGCACTACAGATGTATCCGCGTTGAAGACGACGCGCCCTCGGACGCCGACGCGGATCTCCCCGCCGGGTACCAGTTCAGCGTCAGCCTTGTGCCCGATCTCAACCTCAACAACTTGGACTCATTCCTCGCCGAACTGAGCGCCATACGCGCGGAAGAGAAGACGGACATGTCAGTGGACATGGCATGCGACGTGTGCCCGCATGCTCGGATGCCTATCTTAGATAAGTTGATATCGAGCGTGTCCCACCATGTGCGCGCGGCCGGCTACCGACACGACGACCCGCTCGTGCCGCTGTTGCTGCACGGCATCAGGGACGTGTTCAGGTAG
Protein
MAAESLCAAGAAACGWHHSHPASAARPSARDLRTQRALQRALRRPFLALITSPHWPPGRTASHYRCIRVEDDAPSDADADLPAGYQFSVSLVPDLNLNNLDSFLAELSAIRAEEKTDMSVDMACDVCPHARMPILDKLISSVSHHVRAAGYRHDDPLVPLLLHGIRDVFR

Summary

Pfam
PF01398   JAB        + More
PF14464   Prok-JAB
Interpro
IPR037518   MPN        + More
IPR009057   Homeobox-like_sf       
IPR000555   JAMM/MPN+_dom       
IPR033497   MYSM1       
IPR028090   JAB_dom_prok       
IPR001005   SANT/Myb       
SUPFAM
SSF46689   SSF46689       

Ontologies

Topology

Length:
170
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00316
Exp number, first 60 AAs:
0.00315
Total prob of N-in:
0.08279
outside
1  -  170
 
 

Population Genetic Test Statistics

Pi
65.383556
Theta
77.844719
Tajima's D
-0.492222
CLR
0.369948
CSRT
0.24198790060497
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号