Silkworm Genome Informatics Database

Gene

KWMTBOMO10537

Pre Gene Modal

BGIBMGA007135

Annotation

PREDICTED:_axin_[Bombyx_mori]

Location

Bomo_Chr17(+):13550022-13572003 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.649

CDS

ATGAGCCACACTCCTGTAGGCGGCCACCCGCAAGGTTGGGAGCACAAGCTTGCTGACAGGTCGTCGTTACCGCAGGCTTCGGGTGAGGAGAAAAGCAAATCTCAGTCCAAACATGTGTTCGCACAACCGCATTTCTCCAAGGTCAGCATGGCGTGGCGCGAGCAGACGGAGGGGTCGTCGGGCAGCTCGGCGCGGTCGCCCGCCTCGCCGCCCTACATGCGCTGGGCGCGCAGTCTGCACGAGTTGCTTGAGGACGCGGAGGGGGTGCGCCTGTTCCGCAAGTTCGTGGGGGGCGCGGGGGGACTGCACGTCGACCGACTCAACTTCTACTTCGCGGTCCAGGGGCTGCGGCAGGAGGCCGACGCCGCCAAGATACGGCAGGTCGTCTCCGCTATATACAAATTTCTCCGCAAGTCTCAGCTAGCGATGCCCGAAGAGCTGAAGCAGCAGGTGAAGCAGAGCCTCAAAGACGGCTCCAGCATCGAGAAGAACATCTTCGATAACATGGAACAGGAGGTGACGCGCGCCATAACTGAGACGACGTACCAGGCGTTCCTGCGCTCGGACGCGTACGTGTCGTACGTGAGCGCCGCCACGCAGCCGCTCTCCTCCCCCGACGCCTCGCCCCCGCCACCCGCTAAAGACCTGTCGGCGGGCGGGCTGGCCACGCTGCACGAGGGGCAGGAGCTGGCGGGCGCGCCGGCGCGGCTCACGCACGACGCGCTGCTGGCCACGCAGTCGCGCCGCCTGCGCTCCGACGCCGCGCCACACCGCAAGCGCTCCGTGTACAGCGCGCACGTGGCGTACGCCGGCTACTGTCCCGCCTCGCGCTACGACTCGGAGCGGGCCAGCCTCAGCAGCGGCCGCGCCGACAGCGACGCCGTGTCGCTCTCCGGCAGCAGTCTCGATGGCGTGTCAGCCCGCGGAGTCCGGGAGTCCAGGGATACGCGGCACCGGTCTCGACTCCCCGGCATGGACCGGCACGCCGTCATCAATAAGGAGCAGGACACCGCCATGGTGATCCCGCGCACGGTGCGCGTGCAGTCGGAGCAGCTGCGCGTGCTGGCGCCGGCCGAGTTCGCGCCGCTGCTCATCGAGCGGCTCGAGCGCGTCAAGCGCGACCAGGACGCCAAGGAGCGCCTCGAGAGAAGGCTCGCCGAGGGTGACGCTGAAGACGGCTCCAGCCAGGCGCTGCCGCCGCAGCTGGTCGCGGCCGCCATCCGAGAGAAACTGCAGCTCGACGATGACAACGATCAGGATATATTAGACCAGCACGTGTCGCGCGTGTGGTCGGAGCGCACGCCGGGCGCGTCCCCGCCGGGGGGCCGGCGCGCCCGCCAGCGACACGCGCACTCGAGCCACGCCGCGCACTCCGCACACTCGCGCCGCGCCGCCTCCGCGCTCTCCGCCGCGCTCTCCGCCGACTCGGGACACTACGACGCGCCGCCGGACTCCTTCAACCATCCGCACTCGCTGACGCGCAGATCGTTCTCGAAGAAGACGGTGACGGAGTTGACGGACAGCGGCGTGTCCGTGGTCAGCGACAACACGACGAGCGCGGGCGGCGTGGAGCCCCGCATCCTGCTGTGGATCGCCGAGGGCTCCGAGCGCCTCGAGCGCCGGCACCTGCTCTCCTCCAGGGGCTCCTCCGCCGACCGCAGGGACAAGCAGAGGTCACGGGGCAGCGGCAGCAAGGGCGGCAGCGGGCACAGCGGCGCGGCGGAGCAGACCGTGGTGGTGGTGACGTTCCTGGACGAGCCCGTGCCCTACCGCTTCAAGGTGCCCGCCGCGCCGCTCACACTCAAACTCTTCAAGGACTACCTGCCCAAGAAGGGAAACTTCAGATACTTCTTCAAGACGAACTGCGCGGACCTGGACACGGTGATACAGGAGGAGGTGTGCAACGACGCGGACACGCTGCCCATGTTCGAGGGCAAGGTCATGGCGCGCGTCAAGAGCGTCGACTAG

Protein

MSHTPVGGHPQGWEHKLADRSSLPQASGEEKSKSQSKHVFAQPHFSKVSMAWREQTEGSSGSSARSPASPPYMRWARSLHELLEDAEGVRLFRKFVGGAGGLHVDRLNFYFAVQGLRQEADAAKIRQVVSAIYKFLRKSQLAMPEELKQQVKQSLKDGSSIEKNIFDNMEQEVTRAITETTYQAFLRSDAYVSYVSAATQPLSSPDASPPPPAKDLSAGGLATLHEGQELAGAPARLTHDALLATQSRRLRSDAAPHRKRSVYSAHVAYAGYCPASRYDSERASLSSGRADSDAVSLSGSSLDGVSARGVRESRDTRHRSRLPGMDRHAVINKEQDTAMVIPRTVRVQSEQLRVLAPAEFAPLLIERLERVKRDQDAKERLERRLAEGDAEDGSSQALPPQLVAAAIREKLQLDDDNDQDILDQHVSRVWSERTPGASPPGGRRARQRHAHSSHAAHSAHSRRAASALSAALSADSGHYDAPPDSFNHPHSLTRRSFSKKTVTELTDSGVSVVSDNTTSAGGVEPRILLWIAEGSERLERRHLLSSRGSSADRRDKQRSRGSGSKGGSGHSGAAEQTVVVVTFLDEPVPYRFKVPAAPLTLKLFKDYLPKKGNFRYFFKTNCADLDTVIQEEVCNDADTLPMFEGKVMARVKSVD

Uniprot

A0A2A4JTN0 A0A0N0PC15 A0A194PJB2 A0A2H1VBR5 A0A212EI40 H9JC90 + More
A0A0N0BCB4 A0A1B0GJW7 A0A1L8DWD1 A0A0L7R2T3 A0A1Y1KAT0 U4UTG7 N6UBE7 D6WW21 A0A0T6B2Q9

Pubmed

26354079 22118469 19121390 28004739 23537049 18362917 + More
19820115

EMBL

NWSH01000689 PCG74760.1 KQ460711 KPJ12693.1 KQ459603 KPI93128.1 + More
ODYU01001709 SOQ38290.1 AGBW02014713 OWR41145.1 BABH01015089 KQ435918 KOX68742.1 AJWK01022429 GFDF01003346 JAV10738.1 KQ414664 KOC65187.1 GEZM01089274 JAV57561.1 KB632356 ERL93420.1 APGK01041556 KB740994 ENN75967.1 HE608844 KQ971361 CCE45999.1 EFA09228.1 LJIG01016073 KRT81696.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000007151 UP000005204 UP000053105 + More
UP000092461 UP000053825 UP000030742 UP000019118 UP000007266

PRIDE

H9JC90

Pfam

PF08833   Axin_b-cat_bind        + More
PF00778   DIX
PF00615   RGS

Interpro

IPR024066   RGS_subdom1/3        + More
IPR016137   RGS
IPR029071   Ubiquitin-like_domsf
IPR001158   DIX
IPR036305   RGS_sf
IPR014936   Axin_b-cat-bd
IPR038207   DIX_dom_sf
IPR032101   Axin_TNKS-bd

SUPFAM

SSF48097 SSF48097 + More
SSF54236 SSF54236

Gene 3D

1.10.196.10 3.10.20.380

CDD

cd11582 Axin_TNKS_binding

ProteinModelPortal

A0A2A4JTN0 A0A0N0PC15 A0A194PJB2 A0A2H1VBR5 A0A212EI40 H9JC90 + More
A0A0N0BCB4 A0A1B0GJW7 A0A1L8DWD1 A0A0L7R2T3 A0A1Y1KAT0 U4UTG7 N6UBE7 D6WW21 A0A0T6B2Q9

PDB

1EMU E-value=1.44442e-12, Score=179

KEGG

101739893 K02157 axin 1 | (RefSeq) axin

PATHWAY

04310 Wnt signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0016055 GO:0030877 GO:0030159

Length:

655

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00012

outside

1 - 655

Pi

240.847935

Theta

185.906034

Tajima's D

0.986397

CLR

0.300535

CSRT

0.652867356632168

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics