Silkworm Genome Informatics Database

Gene

KWMTBOMO10523

Annotation

PREDICTED:_uncharacterized_protein_LOC101738999_[Bombyx_mori]

Location

Bomo_Chr17(-):13350311-13351476 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.507 PlasmaMembrane Reliability : 1.662

CDS

ATGGTTCACGACAGCATACAATACACGAAATCCATTGAAAATATGGTGATCGACTATGAAGACGATAAGAACTCTATGATCGCTCTTGCAGAACAAGAAAATATACATTTTTATGACGACTTTTACGATGAAATGGACAGTCGAATCAAAATGGAGAATTCCATGAATATGATTTTCTTTGGACCCGTAAGCTCGTTCATGAGAATAGATGCTGAAAGTTTGTTGCACATTTTGACTTTCACTAAAAAACATTTGATTCCGATATCACGGACTATTTTAATATGGGACTTGATCACAGGCATGGCTTTTATTGTCGCTGCATTGGAAACTCAAGCATATGATATTATGGCGGAACGCGGTGACTATTTAAAGCAAACATCCTCGCGATAA

Protein

MVHDSIQYTKSIENMVIDYEDDKNSMIALAEQENIHFYDDFYDEMDSRIKMENSMNMIFFGPVSSFMRIDAESLLHILTFTKKHLIPISRTILIWDLITGMAFIVAALETQAYDIMAERGDYLKQTSSR

Uniprot

A0A3S2N9X9 A0A0N1PIX9 A0A212ERY4

Pubmed

26354079 22118469

EMBL

RSAL01000162 RVE45382.1 KQ460711 KPJ12685.1 AGBW02012899 OWR44247.1 + More

Proteomes

UP000283053 UP000053240 UP000007151

Pfam

PF00076 RRM_1

Interpro

IPR026664   Stereocilin-rel        + More
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR000504   RRM_dom
IPR035979   RBD_domain_sf

SUPFAM

SSF54928 SSF54928

Gene 3D

3.30.70.330

ProteinModelPortal

A0A3S2N9X9 A0A0N1PIX9 A0A212ERY4

KEGG

101738999 no KO assigned | (RefSeq) uncharacterized LOC101738999

GO

GO:0003723

PANTHER

PTHR23412

Length:

129

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.92297

Exp number, first 60 AAs:

0.83336

Total prob of N-in:

0.82293

inside

1 - 90

TMhelix

91 - 113

outside

114 - 129

Pi

272.518411

Theta

187.026609

Tajima's D

1.240223

CLR

0

CSRT

0.72106394680266

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics