Silkworm Genome Informatics Database

Gene

KWMTBOMO10522

Pre Gene Modal

BGIBMGA006982

Annotation

PREDICTED:_uncharacterized_protein_LOC106121129_[Papilio_xuthus]

Location

Bomo_Chr17(-):13347596-13349046 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.112 PlasmaMembrane Reliability : 1.03

CDS

ATGTGGTATGAGGATAGTGATTACATAAACGAACTGGGATACTTAATATGCGGTTTCCCGGCGCATATAATAAGCAAAATTACCCCGGCTGTGTTTAAAAAGATCGACGTAGAAATTTTTAAGAAGCTTAGCTTGTGTTCTGTTAACCAAACGAAGACTCTTTATAACTTAGCGACACATAAAAATGCCTATGGCAAGCCGTACAAATGGTCATCGCATGAAATCACAAAACTGGATATTCTTTTCATTTGTGTACCTAAAGAATCGATCAGTTCAATCAGGCTTGAAGCGATCCCAGCCATAAGCAAACACATAATGGAAATGATACATCAAGATAAATTGGAATATTTCACGAAGCAACAAATACTAAGAATGAACCCAGAGGCGCGCCGCATGTACATCATAAGGGTACAATTGAGAACCAGTCTCGACACTTCTCAAATCGCCAAACAAGATGCTAATGCAATAAAAAAATCTGTTCCTCTTGCTTTAATTTACGTTTTTACTCTAATATTAAAATAA

Protein

MWYEDSDYINELGYLICGFPAHIISKITPAVFKKIDVEIFKKLSLCSVNQTKTLYNLATHKNAYGKPYKWSSHEITKLDILFICVPKESISSIRLEAIPAISKHIMEMIHQDKLEYFTKQQILRMNPEARRMYIIRVQLRTSLDTSQIAKQDANAIKKSVPLALIYVFTLILK

Uniprot

H9JBT7 A0A212ERY4 A0A3S2N9X9 A0A0N1PIX9 A0A2H1VPQ5 A0A194PII0 + More
D6WNU1 A0A2A4IY93 A0A2H1VXT9 A0A3S2LE82 A0A226EF87 A0A096LYQ8 A0A087XBJ9 A0A1L8H0R0 A0A1S3IXA1 W5LJ55 E7FGE4 A0A2R8PYF0 A0A3B3TIX4 A0A3Q2EA80 A0A3B3HQH5 A0A087YCS5 A0A096MAL4 A0A3S2PRY3 A0A3P9KW48 T1HEG7

Pubmed

19121390 22118469 26354079 18362917 19820115 27762356 + More
25329095 23594743 17554307

EMBL

BABH01015062 AGBW02012899 OWR44247.1 RSAL01000162 RVE45382.1 KQ460711 + More
KPJ12685.1 ODYU01003698 SOQ42786.1 KQ459603 KPI93122.1 KQ971342 EFA03856.1 NWSH01004767 PCG64701.1 ODYU01005104 SOQ45649.1 RSAL01000185 RVE44809.1 LNIX01000004 OXA56059.1 AYCK01005567 CM004470 OCT89680.1 CR293520 AYCK01006466 CM012439 RVE74469.1 ACPB03022058

Proteomes

UP000005204 UP000007151 UP000283053 UP000053240 UP000053268 UP000007266 + More
UP000218220 UP000198287 UP000028760 UP000186698 UP000085678 UP000018467 UP000000437 UP000261500 UP000265020 UP000001038 UP000265180 UP000015103

PRIDE

H9JBT7

Pfam

PF00076   RRM_1        + More
PF06060   Mesothelin
PF03662   Glyco_hydro_79n

Interpro

IPR000504   RRM_dom        + More
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR035979   RBD_domain_sf
IPR026664   Stereocilin-rel
IPR022657   De-COase2_CS
IPR026061   Stereocilin
IPR026663   Otoancorin
IPR010335   Mesothelin
IPR005199   Glyco_hydro_79
IPR017853   Glycoside_hydrolase_SF

SUPFAM

SSF54928 SSF54928 + More
SSF51445 SSF51445

Gene 3D

3.30.70.330

ProteinModelPortal

H9JBT7 A0A212ERY4 A0A3S2N9X9 A0A0N1PIX9 A0A2H1VPQ5 A0A194PII0 + More
D6WNU1 A0A2A4IY93 A0A2H1VXT9 A0A3S2LE82 A0A226EF87 A0A096LYQ8 A0A087XBJ9 A0A1L8H0R0 A0A1S3IXA1 W5LJ55 E7FGE4 A0A2R8PYF0 A0A3B3TIX4 A0A3Q2EA80 A0A3B3HQH5 A0A087YCS5 A0A096MAL4 A0A3S2PRY3 A0A3P9KW48 T1HEG7

KEGG

NA

GO

GO:0003723 GO:0007218 GO:0016021 GO:0007160 GO:0009986 GO:0016798 GO:0016020

PANTHER

PTHR23412 PTHR23412:SF14 PTHR23412:SF18

Length:

173

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.09895999999999

Exp number, first 60 AAs:

4.46386999999999

Total prob of N-in:

0.33847

outside

1 - 173

Pi

240.871829

Theta

189.153998

Tajima's D

0.876749

CLR

0

CSRT

0.628368581570921

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics