Silkworm Genome Informatics Database

Gene

KWMTBOMO10513

Annotation

PREDICTED:_alkyldihydroxyacetonephosphate_synthase_[Amyelois_transitella]

Location

Bomo_Chr17(+):13132947-13140575 View in EpiBrowser

Full name

Alkylglycerone-phosphate synthase

Location in the cell

Mitochondrial Reliability : 1.393 Nuclear Reliability : 1.686

CDS

ATGTCATCTCCAAACGAGAGCAGCCCAGAAAATTTGCGAAATATAGACAATGGAAGTGAAAGAACAGTGGAGAGTGTTAAAAATAAAATATCGAGTGATAAAAATAAAAATGAATCCGCGAATACTATGATGATAAAAGTTAAAAGTGCTATTCCTCGACGTAGACAGGATCTGCTGAAGTGGTACGGATGGGGCTACAAGGACACCATGTTCAAATTCAGCAGTGAGAGTGCCGCCTTCACCGGGAACAGGTAA

Protein

MSSPNESSPENLRNIDNGSERTVESVKNKISSDKNKNESANTMMIKVKSAIPRRRQDLLKWYGWGYKDTMFKFSSESAAFTGNR

Description

Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids.

Catalytic Activity

a 1-acylglycerone 3-phosphate + a long chain fatty alcohol = 1-O-alkylglycerone 3-phosphate + a long-chain fatty acid + H(+)

Cofactor

FAD

Subunit

Homodimer.

Similarity

Belongs to the FAD-binding oxidoreductase/transferase type 4 family.

Uniprot

A0A2H1VA52 A0A2A4K6C2 A0A212F847 A0A1S4ED87 A0A182R8H3 A0A1I8GBL3 + More
W5UG46 G3NKL8 H3DHT8 H3BXS9 Q4RNP3 V4BAI0 A0A060XPN9 F1QC72 Q7ZVJ9 A0A3B4ECX7 A0A026WRM0 B0V3G4

EC Number

2.5.1.26

Pubmed

22118469 26392545 23127152 15496914 23254933 24755649 + More
23594743 24508170 30249741

EMBL

ODYU01001480 SOQ37730.1 NWSH01000131 PCG79220.1 AGBW02009792 OWR49915.1 + More
JT415275 AHH40971.1 CAAE01015010 CAG09989.1 KB200129 ESP02962.1 FR905794 CDQ81593.1 CABZ01069474 CABZ01069475 CU104712 CU104777 FO905024 BC045516 BC164864 AAH45516.1 AAI64864.1 KK107119 QOIP01000009 EZA58662.1 RLU18282.1

Proteomes

UP000218220 UP000007151 UP000079169 UP000075900 UP000095280 UP000221080 + More
UP000007635 UP000007303 UP000030746 UP000193380 UP000000437 UP000261440 UP000053097 UP000279307

Pfam

PF02913 FAD-oxidase_C + More
PF01565 FAD_binding_4

Interpro

IPR006094   Oxid_FAD_bind_N        + More
IPR016171   Vanillyl_alc_oxidase_C-sub2
IPR016164   FAD-linked_Oxase-like_C
IPR016166   FAD-bd_PCMH
IPR025650   Alkyl-DHAP_Synthase
IPR004113   FAD-linked_oxidase_C
IPR016167   FAD-bd_PCMH_sub1
IPR036318   FAD-bd_PCMH-like_sf
IPR016169   FAD-bd_PCMH_sub2

SUPFAM

SSF56176 SSF56176 + More
SSF55103 SSF55103

Gene 3D

1.10.45.10 3.30.43.10 3.30.465.10

ProteinModelPortal

A0A2H1VA52 A0A2A4K6C2 A0A212F847 A0A1S4ED87 A0A182R8H3 A0A1I8GBL3 + More
W5UG46 G3NKL8 H3DHT8 H3BXS9 Q4RNP3 V4BAI0 A0A060XPN9 F1QC72 Q7ZVJ9 A0A3B4ECX7 A0A026WRM0 B0V3G4

PDB

4BC7 E-value=0.00117043, Score=92

KEGG

101738589 K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] | (RefSeq) alkyldihydroxyacetonephospha

GO

GO:0016491 GO:0008609 GO:0071949 GO:0005777 GO:0008611

PANTHER

PTHR46568

Subcellular location

Peroxisome

Length:

84

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00065

Exp number, first 60 AAs:

3e-05

Total prob of N-in:

0.11337

outside

1 - 84

Pi

33.633643

Theta

19.01341

Tajima's D

-0.961556

CLR

0.095379

CSRT

0.138893055347233

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics