Gene

KWMTBOMO10496  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007118

Annotation

hydroxysteroid_dehydrogenase_[Bombyx_mori]

Location

Bomo_Chr17(+):12821974-12835278      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.767

CDS

ATGAGTCTTGTAGCTAATACTGGAAAACTTGCGGGCCGAACGCTGTTTATTACTGGTGCTTCTCGTGGAATTGGCAAGGCTATAGCTCTGAAAGCTGCGAAAGACGGCGCAAATGTTGTAATTGCCGCGAAAACTGCCGAACCTCATCCCAAACTACCTGGCACTATTTATACCGCTGCTGAAGAAATTGAGGCTCTTGGTGGAAAGGCATTGCCATGCATTGTTGATGTTAGAGATGAGAAACAAGTGCAGAAGGCTGTTGATGAAGCCGTGAAAAAGTTCAATGGCATTGATATTCTAGTGAACAATGCATCAGCCATTTCACTAACGGGAACAGCCCAGACTGATATGAAAAGATATGATCTCATGCATAACATTAATACCAGAGGAACCTTTTTAGCGTCGAAGATATGTCTACCAGTTTTGAAAAATAGCAATCACGCCCACATTTTGAATCTGTCACCACCTCTTAACATGAACCCGTACTGGTTCTCAATTCATGTAGCATACACAATGGCCAAATACGGTATGTCTATGTGTGTGCTTGGCATGAGTGAAGAATTCAAACCATTCAATATCGGTGTCAACGCTCTGTGGCCAAAAACAGCTATAGCAACAGCGGCCATTGAAATGTTGACCGGGGACACGTCAACAAGTCGCAAGCCTGAGATCGTTTCCGACGCGGCGTACCTCATGCTCTGCAAAGACCCAAAAACGTATACCGGCAACTTTGCTATCGACGAAGACGTCGTGAAGGAAGCCGGCATCAAAGACTTATTACCCTATGCCTGTGATCCGAGTAACGTACAGAATTTGTTACCGGACTTCTTTTTGGATGTTTCCGGGGAATCCGTTGAGCCGACCATAAAGGAATCCGACACCGCAGGCGAAATCCCAGCGCTGTTTTCATTGATCGGTAAAAACCTGAGCGCCGACTTAGTGAAGAAGACTCAAGCCGTATTCCAGTTCAACGTCAAAGGTAAAGAAGAGGGAGTGTGGCATATCGACCTCAAGAACGGCGAGGGTACGTGCGGGCAGGGCGAGCCCAAGAACCCTCCGGACGCGACTCTGACGATGGACGGGAAGAACTTCACTGACATGTTCGCGGGAAAACTAAAACCGACGACAGCCTTCATGATGGGAAAACTGAAAATCAAAGGTGATCTACAAAAGGCAATGAAGCTTGAAAAGATGATGCAGTCGTTGAAGAAGAAAGCTTAG

Protein

MSLVANTGKLAGRTLFITGASRGIGKAIALKAAKDGANVVIAAKTAEPHPKLPGTIYTAAEEIEALGGKALPCIVDVRDEKQVQKAVDEAVKKFNGIDILVNNASAISLTGTAQTDMKRYDLMHNINTRGTFLASKICLPVLKNSNHAHILNLSPPLNMNPYWFSIHVAYTMAKYGMSMCVLGMSEEFKPFNIGVNALWPKTAIATAAIEMLTGDTSTSRKPEIVSDAAYLMLCKDPKTYTGNFAIDEDVVKEAGIKDLLPYACDPSNVQNLLPDFFLDVSGESVEPTIKESDTAGEIPALFSLIGKNLSADLVKKTQAVFQFNVKGKEEGVWHIDLKNGEGTCGQGEPKNPPDATLTMDGKNFTDMFAGKLKPTTAFMMGKLKIKGDLQKAMKLEKMMQSLKKKA

Uniprot

H9JC73   Q1HPV6   A0A0N1I8M8   A0A2A4JFS3   I4DMW6   A0A212FHN5   + More
A0A2A4JH74   A0A2H1V6V2   A0A3S2M2U5   A0A194PK46   N6UB60   A0A0K8TN42   U4U808   A0A0K8UJV2   K7IYJ2   A0A0C9RT63   A0A034W7D2   A0A1B0DNZ3   A0A232ETW0   W8C9Y8   A0A2J7PSV5   A0A158NKP0   A0A1B0G7Q3   D6WW74   A0A0A1XDA3   A0A1A9V8E1   U5EZ86   A0A195DG87   D3TRX0   Q29BG6   A0A195BND5   A0A195CJ23   A0A0L0CQB6   B4NAR4   B4GNX4   A0A336MA68   A0A336M689   E2AJV5   A0A0A9WUB0   A0A1B6DJC4   A0A0L7R3K8   A0A3B0K6T9   B0WS47   A0A182J8I1   E2BLL5   A0A195FCC7   A0A3B0JYX8   A0A1S4F1N2   A0A1S4F1N5   A0A224XPT3   A0A1Q3F7J4   A0A1B6GCD4   W5J8Q7   B3LX37   Q17IA4   A0A1J1IN05   A0A2M4BP74   A0A151WRS0   Q1HQY9   A0A1I8NC44   A0A2C9GR76   Q9VB10   Q7PTS9   A0A2M4AFQ2   E9IBY2   A0A1B6HCE3   A0A0N7Z9I5   R4G5K0   A0A2M4AE67   A0A2M4BP82   A0A182KZV6   T1DNB9   A0A0M4EN11   B3P5Y8   A0A2M3Z3S5   A0A1I8PPH4   A0A2M3Z3S0   A0A2M3Z3U3   A0A182QED7   B4QY28   A0A182M4F0   B4IGU8   A0A2M4AEY5   B4PRB4   A0A182VG88   A0A182YQF8   A0A0N0BCG0   B4M622   A0A1W4V8P1   A0A1W4WE02   A0A182W363   B4JU66   A0A0C9Q8U4   A0A182XF48   A0A182U8T1   A0A182JTK9   A0A182FAD2   A0A182RI45   A0A182PLF1   E0VM98  

Pubmed

19121390    26354079    22651552    22118469    23537049    26369729    + More
20075255    25348373    28648823    24495485    21347285    18362917    19820115    25830018    20353571    15632085    17994087    26108605    20798317    25401762    20920257    23761445    17510324    17204158    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    9087549    12364791    14747013    17210077    21282665    27129103    20966253    17550304    25244985    20566863   

EMBL

BABH01015022    BABH01015023    DQ443296    ABF51385.1    KQ460711    KPJ12662.1    + More
NWSH01001534    PCG70935.1    AK402634    BAM19256.1    AGBW02008482    OWR53250.1    PCG70934.1    ODYU01000980    SOQ36551.1    RSAL01000054    RVE50017.1    KQ459603    KPI93099.1    APGK01035637    KB740928    ENN77891.1    GDAI01001816    JAI15787.1    KB632064    ERL88463.1    GDHF01025689    JAI26625.1    GBYB01010691    JAG80458.1    GAKP01008333    GAKP01008332    JAC50619.1    AJVK01017924    NNAY01002209    OXU21798.1    GAMC01001744    JAC04812.1    NEVH01021922    PNF19412.1    ADTU01018942    CCAG010016890    KQ971361    EFA09196.1    GBXI01005371    JAD08921.1    GANO01001243    JAB58628.1    KQ980886    KYN11856.1    EZ424172    ADD20448.1    CM000070    EAL27032.1    KQ976439    KYM86728.1    KQ977649    KYN00725.1    JRES01000049    KNC34565.1    CH964232    EDW80878.1    CH479186    EDW38857.1    UFQT01000608    SSX25673.1    UFQT01000513    SSX24871.1    GL440100    EFN66271.1    GBHO01032598    GBRD01016710    JAG11006.1    JAG49117.1    GEDC01011497    GEDC01002023    JAS25801.1    JAS35275.1    KQ414663    KOC65336.1    OUUW01000005    SPP80711.1    DS232064    EDS33666.1    GL449036    EFN83349.1    KQ981693    KYN37857.1    SPP80710.1    GFTR01005976    JAW10450.1    GFDL01011504    JAV23541.1    GECZ01009683    JAS60086.1    ADMH02001950    ETN60346.1    CH902617    EDV43876.1    CH477241    EAT46391.1    CVRI01000054    CRL00470.1    GGFJ01005739    MBW54880.1    KQ982805    KYQ50544.1    DQ440305    ABF18338.1    EJY57419.1    APCN01005802    AE014297    AY047508    AAF56735.1    AAK77240.1    AAAB01008574    EAA03441.3    GGFK01006147    MBW39468.1    GL762137    EFZ21993.1    GECU01035424    GECU01001939    JAS72282.1    JAT05768.1    GDKW01000451    JAI56144.1    ACPB03009592    GAHY01000480    JAA77030.1    GGFK01005764    MBW39085.1    GGFJ01005736    MBW54877.1    GAMD01003020    JAA98570.1    CP012526    ALC45964.1    CH954182    EDV53388.1    GGFM01002418    MBW23169.1    GGFM01002392    MBW23143.1    GGFM01002367    MBW23118.1    AXCN02001583    CM000364    EDX14676.1    AXCM01000898    CH480837    EDW49066.1    GGFK01006025    MBW39346.1    CM000160    EDW98478.1    KQ435911    KOX68942.1    CH940652    EDW59098.1    CH916374    EDV91036.1    GBYB01010688    JAG80455.1    DS235303    EEB14504.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000283053    UP000053268    + More
UP000019118    UP000030742    UP000002358    UP000092462    UP000215335    UP000235965    UP000005205    UP000092444    UP000007266    UP000078200    UP000078492    UP000001819    UP000078540    UP000078542    UP000037069    UP000007798    UP000008744    UP000000311    UP000053825    UP000268350    UP000002320    UP000075880    UP000008237    UP000078541    UP000000673    UP000007801    UP000008820    UP000183832    UP000075809    UP000095301    UP000075840    UP000000803    UP000007062    UP000015103    UP000075882    UP000092553    UP000008711    UP000095300    UP000075886    UP000000304    UP000075883    UP000001292    UP000002282    UP000075903    UP000076408    UP000053105    UP000008792    UP000192221    UP000192223    UP000075920    UP000001070    UP000076407    UP000075902    UP000075881    UP000069272    UP000075900    UP000075885    UP000009046   

PRIDE

H9JC73    Q1HPV6    Q9VB10   

Pfam

PF00106   adh_short        + More
PF02036   SCP2

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR003033   SCP2_sterol-bd_dom       
IPR002347   SDR_fam       
IPR036527   SCP2_sterol-bd_dom_sf       
IPR000727   T_SNARE_dom       

SUPFAM

SSF55718   SSF55718        + More
SSF51735   SSF51735       

Gene 3D

3.30.1050.10    

ProteinModelPortal

H9JC73   Q1HPV6   A0A0N1I8M8   A0A2A4JFS3   I4DMW6   A0A212FHN5   + More
A0A2A4JH74   A0A2H1V6V2   A0A3S2M2U5   A0A194PK46   N6UB60   A0A0K8TN42   U4U808   A0A0K8UJV2   K7IYJ2   A0A0C9RT63   A0A034W7D2   A0A1B0DNZ3   A0A232ETW0   W8C9Y8   A0A2J7PSV5   A0A158NKP0   A0A1B0G7Q3   D6WW74   A0A0A1XDA3   A0A1A9V8E1   U5EZ86   A0A195DG87   D3TRX0   Q29BG6   A0A195BND5   A0A195CJ23   A0A0L0CQB6   B4NAR4   B4GNX4   A0A336MA68   A0A336M689   E2AJV5   A0A0A9WUB0   A0A1B6DJC4   A0A0L7R3K8   A0A3B0K6T9   B0WS47   A0A182J8I1   E2BLL5   A0A195FCC7   A0A3B0JYX8   A0A1S4F1N2   A0A1S4F1N5   A0A224XPT3   A0A1Q3F7J4   A0A1B6GCD4   W5J8Q7   B3LX37   Q17IA4   A0A1J1IN05   A0A2M4BP74   A0A151WRS0   Q1HQY9   A0A1I8NC44   A0A2C9GR76   Q9VB10   Q7PTS9   A0A2M4AFQ2   E9IBY2   A0A1B6HCE3   A0A0N7Z9I5   R4G5K0   A0A2M4AE67   A0A2M4BP82   A0A182KZV6   T1DNB9   A0A0M4EN11   B3P5Y8   A0A2M3Z3S5   A0A1I8PPH4   A0A2M3Z3S0   A0A2M3Z3U3   A0A182QED7   B4QY28   A0A182M4F0   B4IGU8   A0A2M4AEY5   B4PRB4   A0A182VG88   A0A182YQF8   A0A0N0BCG0   B4M622   A0A1W4V8P1   A0A1W4WE02   A0A182W363   B4JU66   A0A0C9Q8U4   A0A182XF48   A0A182U8T1   A0A182JTK9   A0A182FAD2   A0A182RI45   A0A182PLF1   E0VM98  

PDB

3KVO     E-value=3.74425e-94,     Score=880

KEGG

732974    no KO assigned | (RefSeq) hydroxysteroid dehydrogenase

GO

GO:0016491   GO:0005777   GO:0047936  

Length:

406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.24037

Exp number, first 60 AAs:

0.00857

Total prob of N-in:

0.01428

outside

1  -  406

 

 

Pi

351.920399

Theta

171.026777

Tajima's D

3.237244

CLR

0.692603

CSRT

0.988200589970501

Interpretation

Uncertain