Silkworm Genome Informatics Database

Gene

KWMTBOMO10494

Pre Gene Modal

BGIBMGA007117

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101745926_[Bombyx_mori]

Location

Bomo_Chr17(+):12773494-12808307 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.785

CDS

ATGGAGACCCTCCTCGACAAATTCAAAAGGGAGCAAGGAGGGCTGCGACGTTCCAGATCCGTCCGCGCTTCACTGCGACTGATAGGGAACCGCTGGCGTTCGAACAAGGAAGAACCACCGGCAGATGATATAGACAACGTGAAACGGAACACCGTCGTGTTTACGAAGCCTATTTGGTGCGAGAAGGAGTACGACGACGTCGCTTACGCCGGAGTAAACGGTACGTACAAGCCAAAAACTCCGGTCATGGCGAAACGGAAAGTGGAACCGTTAAAACAGAGAAGGAAAAGTGGAGACGTGGACTTGAGTTTGAAGCCTCAGAGACAAAAGAAAATCGAGAAGAAGTTCAGTGATTTGTTTACGAATAAAAAACAAAAGAGTGTATCTGCAAAAGAGCTGATTATACCAGAGAAGATACCCCCAAAGGCAGCCGCAATACTGCATATTCATGCGCCGGAGAAAGATAAAAAGAAGAAACTTAAGTCAATGGGGAAATCTGAATCTGCTAAGTCAATGTCAGATTTTGTAGTTCAGAAACGTGTGCGGCGAGGATCCGAAGGGGATACGTTCCCTCACCAGCCAAGGGGCCGGGTCAACCCGGCGTTTGTGTACAGCACCCCACCAAAGGAGAGAAAGCTGCCCATGTCGCCGACTTCTTACCTGAAGCTCCAGTACGGCGCGCTGCTCGAAGGGTGCGGGGGGGAACTTCCGTCGTTAAGTGCTTGTACCCCTCACCCCCCGCACCTCGACAAAGCGACGCGCCGCCAACAGAAAGACGCACGCGCCCAACATGACAAAATCGCACAAGTTAACATACATTTGCACGCACTCTTCGCTGCTGTCGAGCATGGGTACTTGGACAAAGCCAGAAACATACTGGACTCGACTGACGTGGATGTCAATAGTCTCAATGCGGACGGCCTCTCACCGTTGGACGTTGCGGTGCTCTCAAACAACCGACCACTTGCCAAGATGCTCATGGAATTCGGTGCTAAAGAAGGAACACAACTTAAGAACTCTGAAGCATTGGGTGCCCATCTACGTCGCTTGGCCCGAGACGCAGAGTCCAAGCTACATGACGTTATCGGATGTGCAACGGAGCGACCATGTCGCGATGACGCTTGTACCAGATCTTCAGCTAGTGGTCAAGGCACTGGCACGACCGGGTGTGCTGGTGGGACTGGCTCCGAAAAGGATAAACAGGCACAGCATTGGGAAAGAAGAGTCAGAACCCTCAAACGTCTTGTCCAAGGCTGGCAACAGCTTCGTGTGCCTCTTGCGCCAAACGCACCAGATCTGGAGGTCTGTGGATCTCACGCGGTCACGGTCCGGTTAAGAGACGCCAAACCAGCATCCCTTGAAGACTTACCGGCCGTTACTAAGTTTAAAGTGGAGTGGTCATCGCGAGCCGATTTCTCTAACGTGTGCGGGGTCCGTGAGCTGACCTCATCGGGCGCTAACGTCGGCACCAAAGCCTTGATCACGGGCCTCACGCGGGGCAGGCGATACTTCTTGAGGGCTGCCGCCGGGAACATCAAGGGTTGGGGGCCGTTCAGCGTTTCTGTACCCAGAAGTGTCGTGCCGAGCAGTAAGTCTAATATAGTTCTGTCTATCGGTTAA

Protein

METLLDKFKREQGGLRRSRSVRASLRLIGNRWRSNKEEPPADDIDNVKRNTVVFTKPIWCEKEYDDVAYAGVNGTYKPKTPVMAKRKVEPLKQRRKSGDVDLSLKPQRQKKIEKKFSDLFTNKKQKSVSAKELIIPEKIPPKAAAILHIHAPEKDKKKKLKSMGKSESAKSMSDFVVQKRVRRGSEGDTFPHQPRGRVNPAFVYSTPPKERKLPMSPTSYLKLQYGALLEGCGGELPSLSACTPHPPHLDKATRRQQKDARAQHDKIAQVNIHLHALFAAVEHGYLDKARNILDSTDVDVNSLNADGLSPLDVAVLSNNRPLAKMLMEFGAKEGTQLKNSEALGAHLRRLARDAESKLHDVIGCATERPCRDDACTRSSASGQGTGTTGCAGGTGSEKDKQAQHWERRVRTLKRLVQGWQQLRVPLAPNAPDLEVCGSHAVTVRLRDAKPASLEDLPAVTKFKVEWSSRADFSNVCGVRELTSSGANVGTKALITGLTRGRRYFLRAAAGNIKGWGPFSVSVPRSVVPSSKSNIVLSIG

Uniprot

A0A212FHP0

Pubmed

22118469

EMBL

AGBW02008482 OWR53251.1

Proteomes

UP000007151

Interpro

IPR039269   ANKFN1        + More
IPR036116   FN3_sf
IPR002110   Ankyrin_rpt
IPR013783   Ig-like_fold
IPR000159   RA_dom
IPR003961   FN3_dom
IPR020683   Ankyrin_rpt-contain_dom
IPR036770   Ankyrin_rpt-contain_sf

SUPFAM

SSF48403 SSF48403 + More
SSF49265 SSF49265

Gene 3D

1.25.40.20 2.60.40.10

CDD

cd00063 FN3
cd00204 ANK

ProteinModelPortal

A0A212FHP0

PDB

5LW1 E-value=0.0267093, Score=89

KEGG

101745926 no KO assigned | (RefSeq) uncharacterized LOC101745926

GO

GO:0007165 GO:0005515 GO:0000166 GO:0003723 GO:0003743 GO:0005852 GO:0006413 GO:0031369 GO:0046872 GO:0003824

PANTHER

PTHR21437

Length:

539

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00391

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00156

outside

1 - 539

Pi

238.293397

Theta

162.135426

Tajima's D

1.173306

CLR

0.696518

CSRT

0.706914654267287

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics