Gene

KWMTBOMO10486

Pre Gene Modal

BGIBMGA007109

Annotation

PREDICTED:_synaptogyrin-2_[Amyelois_transitella]

Location

Bomo_Chr17(+):12371857-12374036      View in EpiBrowser

Full name

Synaptogyrin      

Location in the cell

Extracellular   Reliability : 1.187 Nuclear   Reliability : 1.234

CDS

ATGAGGGTGGCCTGCGCTTTCTTCGCTTTCCAACGGTTCCGCATGGGCGCTGATGCGGCGTTCGCTCCGGCATACGAAGTGGAGGGCGCGATCGGAAGCCCTGGAGGCTTTCCCACCTACCCAGGGGCTCCAGACCCGCAGCCTACCTACACCGAACCTCCCTTCTCACAGACAGCTGGAAACACAGGAAACATGGACTACACAGCTCCTACGTATTAA

Protein

MRVACAFFAFQRFRMGADAAFAPAYEVEGAIGSPGGFPTYPGAPDPQPTYTEPPFSQTAGNTGNMDYTAPTY

Similarity

Belongs to the synaptogyrin family.
Belongs to the peptidase S1 family.

Uniprot

H9JC64   A0A2H1WNL4   A0A2A4IT78   A0A194PJ72   A0A194QV35   A0A212ETW9   + More
A0A0L7L2K6   A0A139WCN3   F4W8F8   A0A195FAI0   A0A195EIZ0   A0A151X6V0   A0A195BA21   A0A0T6ATJ9   E2B0H6   A0A195C2S2   A0A1W4X3H3   A0A1W4XE67   A0A1Y1N9D6   A0A310SML6   A0A1D2NHB3   A0A154PHI4   A0A1Y1N4W9   A0A1W7R9G9   A0A1B6LJQ0   A0A0J7KFS4   A0A158NK62   A0A1B6EQN8   E2BW49   A0A1B6JMA7   A0A2P8XLI5   N6UB50   A0A2J7RIN7   A0A1B6DG20   A0A067QTC2   K7IWX7   A0A232EG97   A0A2C9KGP5   A0A088ABU3   A0A2P2I2E9   A0A0L7RHI7   A0A2A3ESZ5   V9I940   A0A0M9A2K5   T1JEK9   E9JAT1   A0A2P6KR41   A0A0P4WBU1   A0A0P4W5U2   A0A3R7MFY4   A0A087UZ13   A0A0K8TLN8   L7LS27   A0A131YHT5   L7M7P2   U5ES59   A0A0K2ULM5   B7P7J0   E0W2F9   A0A0V1N6S4   A0A0V1N6T7   A0A1Y3E6S4   C3YWE3   A0A336LX94   A0A1E1X6Y8   A0A1D1VLJ3   A0A0V0SLD7  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
21719571    20798317    28004739    27289101    21347285    29403074    23537049    24845553    20075255    28648823    15562597    21282665    26369729    25576852    26830274    20566863    18563158    28503490    27649274   

EMBL

BABH01014963    BABH01014964    ODYU01009919    SOQ54661.1    NWSH01008677    NWSH01004183    + More
PCG62454.1    PCG65386.1    KQ459603    KPI93088.1    KQ461137    KPJ08840.1    AGBW02012517    OWR44945.1    JTDY01003329    KOB69723.1    KQ971363    KYB25677.1    GL887908    EGI69449.1    KQ981693    KYN37630.1    KQ978881    KYN27829.1    KQ982472    KYQ56082.1    KQ976537    KYM81383.1    LJIG01022877    KRT78269.1    GL444608    EFN60818.1    KQ978344    KYM94890.1    GEZM01012953    GEZM01012952    GEZM01012951    JAV92856.1    KQ761155    OAD58142.1    LJIJ01000039    ODN04637.1    KQ434905    KZC11267.1    GEZM01012950    GEZM01012949    GEZM01012948    JAV92859.1    GFAH01000596    JAV47793.1    GEBQ01016138    JAT23839.1    LBMM01007938    KMQ89283.1    ADTU01018716    GECZ01029561    JAS40208.1    GL451091    EFN80081.1    GECU01007300    JAT00407.1    PYGN01001777    PSN32861.1    APGK01035626    APGK01035627    KB740928    KB632064    ENN77881.1    ERL88472.1    NEVH01003493    PNF40694.1    GEDC01012706    JAS24592.1    KK852980    KDR12979.1    AAZX01000579    AAZX01000590    AAZX01000596    AAZX01005918    AAZX01006966    AAZX01007623    AAZX01009279    AAZX01011801    AAZX01015199    AAZX01017225    NNAY01004846    OXU17348.1    IACF01002384    LAB68040.1    KQ414592    KOC70196.1    KZ288191    PBC34422.1    JR037155    JR037156    AEY57612.1    AEY57613.1    KQ435756    KOX75980.1    JH432125    GL770679    EFZ10048.1    MWRG01006671    PRD28783.1    GDRN01070524    JAI63866.1    GDRN01070525    JAI63865.1    QCYY01001788    ROT75301.1    KK122373    KFM82602.1    GDAI01002542    JAI15061.1    GACK01010682    JAA54352.1    GEDV01010050    JAP78507.1    GACK01005920    JAA59114.1    GANO01002510    JAB57361.1    HACA01021807    CDW39168.1    ABJB010162845    ABJB011094584    DS652265    EEC02562.1    DS235878    EEB19815.1    JYDO01000005    KRZ79713.1    KRZ79714.1    LVZM01022275    OUC40834.1    GG666561    EEN55187.1    UFQT01000198    SSX21591.1    GFAC01004220    JAT94968.1    BDGG01000006    GAV01003.1    JYDL01000004    KRX27203.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000007266    UP000007755    UP000078541    UP000078492    UP000075809    UP000078540    UP000000311    UP000078542    UP000192223    UP000094527    UP000076502    UP000036403    UP000005205    UP000008237    UP000245037    UP000019118    UP000030742    UP000235965    UP000027135    UP000002358    UP000215335    UP000076420    UP000005203    UP000053825    UP000242457    UP000053105    UP000283509    UP000054359    UP000001555    UP000009046    UP000054843    UP000243006    UP000001554    UP000186922    UP000054630   

Pfam

PF01284   MARVEL        + More
PF13843   DDE_Tnp_1_7
PF00089   Trypsin

Interpro

IPR016579   Synaptogyrin        + More
IPR008253   Marvel       
IPR037386   CCDC40       
IPR029526   PGBD       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
IPR033116   TRYPSIN_SER       

SUPFAM

SSF50494   SSF50494       

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9JC64   A0A2H1WNL4   A0A2A4IT78   A0A194PJ72   A0A194QV35   A0A212ETW9   + More
A0A0L7L2K6   A0A139WCN3   F4W8F8   A0A195FAI0   A0A195EIZ0   A0A151X6V0   A0A195BA21   A0A0T6ATJ9   E2B0H6   A0A195C2S2   A0A1W4X3H3   A0A1W4XE67   A0A1Y1N9D6   A0A310SML6   A0A1D2NHB3   A0A154PHI4   A0A1Y1N4W9   A0A1W7R9G9   A0A1B6LJQ0   A0A0J7KFS4   A0A158NK62   A0A1B6EQN8   E2BW49   A0A1B6JMA7   A0A2P8XLI5   N6UB50   A0A2J7RIN7   A0A1B6DG20   A0A067QTC2   K7IWX7   A0A232EG97   A0A2C9KGP5   A0A088ABU3   A0A2P2I2E9   A0A0L7RHI7   A0A2A3ESZ5   V9I940   A0A0M9A2K5   T1JEK9   E9JAT1   A0A2P6KR41   A0A0P4WBU1   A0A0P4W5U2   A0A3R7MFY4   A0A087UZ13   A0A0K8TLN8   L7LS27   A0A131YHT5   L7M7P2   U5ES59   A0A0K2ULM5   B7P7J0   E0W2F9   A0A0V1N6S4   A0A0V1N6T7   A0A1Y3E6S4   C3YWE3   A0A336LX94   A0A1E1X6Y8   A0A1D1VLJ3   A0A0V0SLD7  

KEGG

101736592    no KO assigned | (RefSeq) synaptogyrin-1

GO

GO:0016021   GO:0060287   GO:0005930   GO:0060271   GO:0035082   GO:0030672   GO:0031594   GO:0004252  

PANTHER

PTHR10838   PTHR16275  

Subcellular location

Membrane  

Length:

72

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08413

Exp number, first 60 AAs:

0.08413

Total prob of N-in:

0.19650

outside

1  -  72

 

 

Pi

160.812718

Theta

142.422153

Tajima's D

0.682635

CLR

0

CSRT

0.565871706414679

Interpretation

Uncertain