Gene

KWMTBOMO10479

Annotation

PREDICTED:_uncharacterized_protein_LOC106133666_[Amyelois_transitella]

Location

Bomo_Chr17(-):12310219-12311056      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.992

CDS

ATGTTTTGTGATTTTGGTGGTTCTTCAGACTTCACGCCAATCGCCTTAGATGGTGTATCCCTGCCAGTCTGCTCCGACTTCAAGTACCTCGGCTCTATACTCCAGAACGACGGCAACATAGACCGGGACGTCACAAATAGAATAAACGCTGGTTGGATGAAATGGCGACAGGTCTCTGCAACAGCATGCGATCGTAGAATGCCCCTTCAGCTCAAGGGCAAAATTTACAAAACGATCATTAGACCTGTCGTGCTGTATGGATCTGAGTGTTGGGCGACGAAAGTTAAGCATGAAAGAGGAGTGCATGCGGCAGAGATGCGAATGTTGAGATGGTTGTGTGGAGTAACAAGAATGGATAAGATAAAGAATAAGTATATCAGAGGAAGTGTGAAAGTGGCCCCGGTAAACAACAAATTAAGGAGCGGACGGTTAGCGTGGTATGGACATGTGATGCGTAGAGAGAAGATGCATGTGACTAGGAGATGTATGGAAATGGTAGTGCAAGGTAGAGGGGGAAGAGGTCGACCGAAGAAGACATGGATGGAGTGTGTGAATAACGATATGAGAGAGAGAGGAGTGAGTGTTGAGATGACGGCTGATAGAAGAGAATGGAAGAGAAAAATTAGTTGTGCCGACCCCACATAG

Protein

MFCDFGGSSDFTPIALDGVSLPVCSDFKYLGSILQNDGNIDRDVTNRINAGWMKWRQVSATACDRRMPLQLKGKIYKTIIRPVVLYGSECWATKVKHERGVHAAEMRMLRWLCGVTRMDKIKNKYIRGSVKVAPVNNKLRSGRLAWYGHVMRREKMHVTRRCMEMVVQGRGGRGRPKKTWMECVNNDMRERGVSVEMTADRREWKRKISCADPT

Uniprot

A0A2A4IZ11   A0A2A4JTH5   A0A016SG79   A0A016SHD2   A0A2I0A7B2   A0A2I0BDY2   + More
A0A016SBS5   A0A016TH37   A0A016SDV3   A0A2I0BFB2   A0A2I0A8G9   A0A016T4Z4   A0A016VL18   A0A2I0A8E3   A0A016TU56   A0A016SKJ5   A0A016TV72   A0A3S4QVV5   A0A2I0A4R0   A0A016S415   A0A016WRX0   A0A016UZ62   A0A151UDZ2   A0A016SKB8   A0A2I0X0R9   A0A2I0XCV6   A0A016T1D4   A0A016SQ37   A0A016T3U9   A0A016VC06   A0A2I0WD15   A0A016UAZ5   Q1AKH8   A0A016S5A7   A0A016X4X8   A0A2I0VW23   A0A016WMG6   A0A016TB11   A0A016UUZ0   A0A2I0WE43   A0A2H9ZWL9   A0A1D6N4Q8   A0A1D6GX82   A0A016VGS9   A0A016X4U3   A0A1D6Q287   A0A1D6EFS5   A0A2I0VKF6   A0A016V2A1   A0A2S3HU98   A0A016X2L9   A0A016TBY7   A0A016U5E2   A0A2I0W1V0   A0A016WTX6   A0A2I0XFV9   A0A0V0IX54   A0A2I0VI73   A0A2I0X0N4   A0A2I0X2W5   A0A016WBG8   A0A2T8I3I2   A0A016VG09   A0A016WAY5   A0A1D6GN15   A0A2I0X0J0   A0A2S3HUX6   A0A016X2P5   D7F169   C4JB60   A0A2I0V6Y4   C6Y4D5   A0A3L6FA92   A0A1D6DWM6   A0A3L6FFF5   A0A016SQS9   A0A2T8IB31   A0A016TVA5   A0A2T7F8M8   A0A1D6HQE7   A0A016S355   A0A1U7X9E6   A0A2I0WGV1   A0A3L6EUT5   A0A3L6DYM7   A0A1D6GGM1   A0A016VX07   A0A2T7F873   A0A2S3IIQ5   A0A016S7U7   A0A016TJ58   A0A016W9G0   A0A3L6FU31   A0A016X2X2   A0A1D6F347   A0A016RXP6   A0A016UIA0   A0A2T8KNP5   M1BPI1   A0A016WIE8  

Pubmed

25730766    28902843    22057054    26754549    16699558    19965430    + More
20470440    19936069    30061735    23773524    21743474   

EMBL

NWSH01004369    PCG65177.1    NWSH01000612    PCG75311.1    JARK01001564    EYB89718.1    + More
EYB89719.1    KZ452013    PKA51430.1    KZ451888    PKA66013.1    JARK01001594    EYB87754.1    JARK01001437    EYC02289.1    JARK01001582    EYB88469.1    KZ451885    PKA66495.1    KZ452012    PKA51832.1    JARK01001473    EYB97757.1    JARK01001345    EYC27463.1    PKA51807.1    JARK01001413    EYC06291.1    JARK01001546    EYB91135.1    EYC06288.1    NCKU01002988    RWS08398.1    KZ452023    PKA50536.1    JARK01001642    EYB85037.1    JARK01000157    EYC41778.1    JARK01001358    EYC20465.1    AGCT01024946    KYP77525.1    EYB91138.1    KZ502235    PKU81499.1    KZ501974    PKU85733.1    JARK01001486    EYB96487.1    JARK01001529    EYB92481.1    JARK01001478    EYB97301.1    JARK01001348    EYC24955.1    KZ502741    PKU73550.1    JARK01001383    EYC12479.1    DQ070849    ABB00038.1    JARK01001626    EYB85828.1    JARK01000002    EYC46303.1    KZ503176    PKU67611.1    JARK01000211    EYC40457.1    JARK01001455    EYB99857.1    JARK01001362    EYC18796.1    KZ502716    PKU73925.1    KZ453102    PKA47709.1    CM007649    ONM35621.1    CM000781    AQK66095.1    AQK67441.1    JARK01001346    EYC26232.1    EYC46273.1    CM000780    CM007650    AQK52712.1    ONM54013.1    CM007648    ONM19028.1    KZ503459    PKU63885.1    JARK01001356    EYC20868.1    CM008050    PAN29912.1    JARK01000001    EYC46334.1    JARK01001453    EYC00158.1    JARK01001391    EYC10519.1    KZ503020    PKU69639.1    JARK01000103    EYC43100.1    KZ502732    KZ501922    KZ501830    PKU73666.1    PKU86798.1    PKU87987.1    GEDG01001285    JAP37101.1    KZ503527    PKU63110.1    PKU81488.1    KZ502564    KZ502519    KZ502203    PKU76010.1    PKU77283.1    PKU82246.1    JARK01000474    EYC36617.1    CM008054    PVH32202.1    EYC26231.1    JARK01000458    EYC36771.1    AQK64650.1    KZ502242    PKU81438.1    PAN30387.1    JARK01000005    EYC46180.1    FJ265554    ADI61822.1    BT088057    ACR38410.1    KZ504148    PKU59166.1    CU462842    CBA11992.1    NCVQ01000005    PWZ29813.1    ONM13079.1    NCVQ01000004    PWZ31071.1    JARK01001524    EYB92930.1    CM008052    PVH34896.1    JARK01001410    EYC06740.1    CM009749    PUZ76420.1    AQK76494.1    JARK01000189    EYB85038.1    EYC40926.1    KZ502668    PKU74878.1    NCVQ01000006    PWZ23087.1    NCVQ01000008    PWZ13007.1    AQK62700.1    JARK01001340    EYC31308.1    PUZ76291.1    PAN45362.2    JARK01001617    EYB86334.1    JARK01001432    EYC02999.1    JARK01000517    EYC36246.1    NCVQ01000003    PWZ38398.1    EYC46181.1    ONM25835.1    JARK01001678    EYB83113.1    JARK01001374    EYC15074.1    CM008047    PVH63795.1    JARK01000257    EYC39401.1   

Proteomes

UP000218220    UP000024635    UP000236161    UP000285301    UP000075243    UP000233837    + More
UP000007305    UP000243499    UP000251960    UP000244336    UP000189701    UP000011115   

PRIDE

D7F169   

Pfam

PF00078   RVT_1        + More
PF03372   Exo_endo_phos
PF01138   RNase_PH

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR027408   PNPase/RNase_PH_dom_sf       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR001247   ExoRNase_PH_dom1       

SUPFAM

SSF56219   SSF56219        + More
SSF54211   SSF54211       

Gene 3D

3.60.10.10     3.30.230.70    

ProteinModelPortal

A0A2A4IZ11   A0A2A4JTH5   A0A016SG79   A0A016SHD2   A0A2I0A7B2   A0A2I0BDY2   + More
A0A016SBS5   A0A016TH37   A0A016SDV3   A0A2I0BFB2   A0A2I0A8G9   A0A016T4Z4   A0A016VL18   A0A2I0A8E3   A0A016TU56   A0A016SKJ5   A0A016TV72   A0A3S4QVV5   A0A2I0A4R0   A0A016S415   A0A016WRX0   A0A016UZ62   A0A151UDZ2   A0A016SKB8   A0A2I0X0R9   A0A2I0XCV6   A0A016T1D4   A0A016SQ37   A0A016T3U9   A0A016VC06   A0A2I0WD15   A0A016UAZ5   Q1AKH8   A0A016S5A7   A0A016X4X8   A0A2I0VW23   A0A016WMG6   A0A016TB11   A0A016UUZ0   A0A2I0WE43   A0A2H9ZWL9   A0A1D6N4Q8   A0A1D6GX82   A0A016VGS9   A0A016X4U3   A0A1D6Q287   A0A1D6EFS5   A0A2I0VKF6   A0A016V2A1   A0A2S3HU98   A0A016X2L9   A0A016TBY7   A0A016U5E2   A0A2I0W1V0   A0A016WTX6   A0A2I0XFV9   A0A0V0IX54   A0A2I0VI73   A0A2I0X0N4   A0A2I0X2W5   A0A016WBG8   A0A2T8I3I2   A0A016VG09   A0A016WAY5   A0A1D6GN15   A0A2I0X0J0   A0A2S3HUX6   A0A016X2P5   D7F169   C4JB60   A0A2I0V6Y4   C6Y4D5   A0A3L6FA92   A0A1D6DWM6   A0A3L6FFF5   A0A016SQS9   A0A2T8IB31   A0A016TVA5   A0A2T7F8M8   A0A1D6HQE7   A0A016S355   A0A1U7X9E6   A0A2I0WGV1   A0A3L6EUT5   A0A3L6DYM7   A0A1D6GGM1   A0A016VX07   A0A2T7F873   A0A2S3IIQ5   A0A016S7U7   A0A016TJ58   A0A016W9G0   A0A3L6FU31   A0A016X2X2   A0A1D6F347   A0A016RXP6   A0A016UIA0   A0A2T8KNP5   M1BPI1   A0A016WIE8  

KEGG

105841869    no KO assigned | (RefSeq) uncharacterized LOC105841869

GO

GO:0016740   GO:0003964   GO:0004519  

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00582

Exp number, first 60 AAs:

0.00546

Total prob of N-in:

0.01836

outside

1  -  214

 

 

Pi

233.461053

Theta

162.443076

Tajima's D

1.403685

CLR

0.337228

CSRT

0.763911804409779

Interpretation

Uncertain