Gene
KWMTBOMO10474
Pre Gene Modal
BGIBMGA006997
Annotation
tRNA-splicing_endonuclease_subunit_Sen54_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 4.367
Sequence
CDS
ATGCCTGATCCAAAACTCCTATCAGGAGAAGAGTTAGTAGCAAAGGGTGTAACGAGAACTGAGGGTGCACTGCCCATCATTGGCCTCAAAGAAGTTGTACCAAACGGTTCTTGGTTAGAGCAAAAACAAATACAAGTGGCTTTGGAAGCTAGAAAACATTTAATCGAAGTTAATAGGATAGAAAAACAAGGTAGTTTATCACATGCTGAATGGAGAAACGATTTAAGGCTTGCTGAAGTAATTCGACAAACTGGTGGATACTGGCAGTTCTATGGACATCATCAAGGAAAAAAATTGTACCTAAAACCTGAAGAAGCACTATTTTTAATGGAAAGTAACTGTCTGCGTCTTAACAATAATGGTATAACAATGTCATTACAAGAAGCATATTCAATATTACTTAATGAAGAACTGTTGTTACTGCAATATCAAGTTTATGCGTCGCTCAGTAGATTAGGATGTAAAGTCTACAGACATGTTGTTAATAAGAAAGAAAAAACAAATTCTAATGAAGATAAATTAGGAAATACGATAACAAATAAAGATACTGATGTTAGTAGTGAAAGTAACATGGAAATTGATTATGGTATTACTGAAATTGGTACTCGAACTACTGAAAGACATGCTAACAAAAAAATTGATGATGGATCTGAGATATCAAATAAAAATAGTGAAAACAATGCCTATGATGAAGTACAGTCCAATGATAATGAAAGTATTGCTACCAGCAGCCAAGAAATTGATAACACTCACATTGTAGATTGTGAAAGCGATGATGAACTTACTGTTGTTATTGAAAATGATTCTTCCAAACAAAACAACAAAAATACAGATGTTGAAGAGTTGACACGTAAAGAAGTTCCTGGTAAAAACACTCACAGTATTGTTACAGACGTGTCAGCTGAAGGCGCTGGTAGCACTCGCGAATCGAATGACGAAACCGAACAAAATTTAAACGAGATGAAGCTACGAAAGCTTTTGGAACGTAAATACAAATCCACTAATGCCAATGCACTCGAAATTAATTTCAAAAAGATACCGGACTTTTATCAGAAAACGTTTGCGACCGTGAAGGCGCCCGAAGAACAGTTCATACCTAAGAACATATATGTAAATAAAACGTCATACGTGCTCAACGTTGAGAACCTTAAAACTAAAGACATTAGAAATACGTCGAGCAACTTATCTTACACATCCTCCGATGAACCAAACGAGTCGCTTAAGAGCATCGGGAACGGTTCGCGTAACGAAATACCCGCCGCGACGCATTTCTACCCGAACACGAGCACACCAAGAATGACCAATCAATACAGACCTTACAACTGGTGGAGGCCGCGCGGGAACTTCAACTACTTTCATTTTAACATGTTCTTTCAGAGGCCATACTTTCCTCAGTATTTCGTACCGAGGTTTCAGTTCCAACCGAGGGTGCATCCGGTTTTCAGATCATACCCGGACATGAGGAACGCCCACACGAACGTTGAAAACGCACAAGGCACGAGGAACTCCCGGAAACGACCACGCGACACACGGATGTACCATTTGCAAATAATCAAGAACCTCGCCGGGAGGCTGAAGAGGCTGATCGCTTCGGGGAATCTGCAGATATCAAATATACAGTCCATACAAAAAGTCATACAGACTTACAACCACAGTTACAAGTGTAAATTGACCCTCACCGATAACTTTGATCTCGTTGACGAGACGGTCGTTATTGAAACTATTGAATTGGATACCGAGGAAGAATCTCAAAATAAAAGGCAAAGAGTCAACGAAGACACCTTCACGGAAAACTTCAACAAGCTCAAAGAGCTAGCGTTGAAGTTGAAAGATTTGAACGAGAAAGACCAAGTCACGTCTCGGCACCGAAGGGCATTTTCGAACGCCATTAAAACTTTCAACAAGTCTTTCAACGCAGACATATACATGAACAGCAACTACGACATGATCGACCGGAGGCAAGTGGTACTGGACACGAGCTCCGACTCCGAAGACGCATTGAATCAACCAAATGCGTTCACCAAGAAATTGAAGAATCCATTTAATATTATAAAGCGTTTTAACGAAATTCGCAACGTGCAATGTACGATCGATAAGGACAACAACGGTGAACCGGAGTCGGATATTGTAAAACCATACGACACAAAACATCGGAGACCAGACGAACTCAGTAAGCACTGGTATCCGAGTGATGATGATTTCGGTCGAGCGGAAGTCGTCCGACGCGACAACGCACGCATTACAGACATTTTCAACAACGGCTACATCTACAGTCTCATATCGGAGTGCCCGAATAAGTACGAAAGCTGGTTAGAAATTAAAATAGCTTTCTTAAAATGTATCGAAATCACCAATAAACACTATAAGAATCAAATTCCGTCAACTAGCGCTGACACGTCTGCTCTGCAGCCCCTAGTGAAGCCAGGTGACTTCTCCGACTTGCCGAAGATGTTGGAGAAATTGCAAATAATAACCGCAGACACTCACATTCCAGAGGAGACCAGCCTCCGAATAGATTTTGATGTTTACAACAGAAGTATAAAGAGTTTTAGAAAAAGCAACAAGCCAAAGCCAGATTTCCGTTTGAGCTGTATCGACGAATCATGTTGCCTTCCATCAGCAGCGGATGTCTCAGCTCTAATATCGAAATACGAAGACGATGTACCGACAATATTCGCCGTTGTAGGCCTAGGCAGTATCTCATATGTACAAATAAAGCCAATCGTATTACCAGTGTATATGCCTAACGAATAA
Protein
MPDPKLLSGEELVAKGVTRTEGALPIIGLKEVVPNGSWLEQKQIQVALEARKHLIEVNRIEKQGSLSHAEWRNDLRLAEVIRQTGGYWQFYGHHQGKKLYLKPEEALFLMESNCLRLNNNGITMSLQEAYSILLNEELLLLQYQVYASLSRLGCKVYRHVVNKKEKTNSNEDKLGNTITNKDTDVSSESNMEIDYGITEIGTRTTERHANKKIDDGSEISNKNSENNAYDEVQSNDNESIATSSQEIDNTHIVDCESDDELTVVIENDSSKQNNKNTDVEELTRKEVPGKNTHSIVTDVSAEGAGSTRESNDETEQNLNEMKLRKLLERKYKSTNANALEINFKKIPDFYQKTFATVKAPEEQFIPKNIYVNKTSYVLNVENLKTKDIRNTSSNLSYTSSDEPNESLKSIGNGSRNEIPAATHFYPNTSTPRMTNQYRPYNWWRPRGNFNYFHFNMFFQRPYFPQYFVPRFQFQPRVHPVFRSYPDMRNAHTNVENAQGTRNSRKRPRDTRMYHLQIIKNLAGRLKRLIASGNLQISNIQSIQKVIQTYNHSYKCKLTLTDNFDLVDETVVIETIELDTEEESQNKRQRVNEDTFTENFNKLKELALKLKDLNEKDQVTSRHRRAFSNAIKTFNKSFNADIYMNSNYDMIDRRQVVLDTSSDSEDALNQPNAFTKKLKNPFNIIKRFNEIRNVQCTIDKDNNGEPESDIVKPYDTKHRRPDELSKHWYPSDDDFGRAEVVRRDNARITDIFNNGYIYSLISECPNKYESWLEIKIAFLKCIEITNKHYKNQIPSTSADTSALQPLVKPGDFSDLPKMLEKLQIITADTHIPEETSLRIDFDVYNRSIKSFRKSNKPKPDFRLSCIDESCCLPSAADVSALISKYEDDVPTIFAVVGLGSISYVQIKPIVLPVYMPNE
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF12928 tRNA_int_end_N2
ProteinModelPortal
Ontologies
KEGG
GO
PANTHER
Topology
Length:
917
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.90518
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1 - 917
Population Genetic Test Statistics
Pi
52.46163
Theta
76.076205
Tajima's D
-0.981778
CLR
0.136871
CSRT
0.139593020348983
Interpretation
Uncertain
